ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl42h07 |
|---|---|
| Clone Library Name | barley_pub |
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 66.2 bits (160), Expect = 2e-11 Identities = 33/63 (52%), Positives = 38/63 (60%) Frame = -2 Query: 221 TCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSRGLGPGP 42 TCSLSVSR YLALDG+Y P+ AAFPNN TR P TG SPS S+ GP Sbjct: 30 TCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGFSPSMTSCSKEHRQGP 89 Query: 41 SLR 33 + + Sbjct: 90 ATK 92
>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 60.5 bits (145), Expect = 1e-09 Identities = 30/54 (55%), Positives = 34/54 (62%) Frame = -2 Query: 221 TCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSR 60 TCSLSVSR YLALDG+Y P+ AAFPNN T + P TG SPS S+ Sbjct: 45 TCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPRHTGFSPSMTSCSK 98
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 34.3 bits (77), Expect = 0.080 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 127 RASWGDRVRAGRGSHPPRRPFPGDL 53 RA W R +AG +HPP PFPG L Sbjct: 380 RAKWRKREKAGAQTHPPGLPFPGPL 404
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 34.3 bits (77), Expect = 0.080 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 127 RASWGDRVRAGRGSHPPRRPFPGDL 53 RA W R +AG +HPP PFPG L Sbjct: 382 RAKWRKREKAGAQTHPPGLPFPGPL 406
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 32.3 bits (72), Expect = 0.30 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 202 G A DR + GAPG P P P P G + G G Q G + P G Sbjct: 982 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ----GPMGPSGPAGA 1037 Query: 203 RPIA 214 R IA Sbjct: 1038 RGIA 1041 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGS-GPDGALTLPGA 70 P+ P +T P+GA G+ GP GA PGA Sbjct: 806 PQGPTGVTGPKGARGAQGPPGATGFPGA 833 Score = 30.0 bits (66), Expect = 1.5 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRLRPRLNTGERPIANKY 223 GAPG AP P P P G +G LG + ++G G P+ TG P + Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETG--PAGPQG 412 Query: 224 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 G KR ++ E G GP PG Sbjct: 413 APGPAGEEGKRGARG-----EPGGAGPIGPPG 439
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 32.3 bits (72), Expect = 0.30 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 202 G A DR + GAPG P P P P G + G G Q G + P G Sbjct: 1022 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ----GPMGPSGPAGA 1077 Query: 203 RPIA 214 R IA Sbjct: 1078 RGIA 1081 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGS-GPDGALTLPGA 70 P+ P +T P+GA G+ GP GA PGA Sbjct: 846 PQGPTGVTGPKGARGAQGPPGATGFPGA 873 Score = 29.3 bits (64), Expect = 2.6 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRLRPRLNTGERPIANKY 223 GAPG AP P P P G +G LG + ++G G P+ TG P + Sbjct: 395 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETG--PAGPQG 452 Query: 224 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 G KR ++ E G GP PG Sbjct: 453 APGPAGEEGKRGARG-----EPGGAGPIGPPG 479
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 32.0 bits (71), Expect = 0.39 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 151 G + DR + GAPG AP P PV P G + G G Sbjct: 590 GSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETG 632 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 190 KGAPG P P+G + G +G+ + G R P L Sbjct: 496 KGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 537
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 31.6 bits (70), Expect = 0.52 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = +2 Query: 65 KGAPGRVRAPSG-------PDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 205 KG PG VR P G P P+ PRG + G G+ P + G + P+ TG++ Sbjct: 150 KGRPG-VRGPRGMPGSPCSPGPIGPRGEKGDIGLTGL-PGARGPMGPKGLTGQK 201
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 31.6 bits (70), Expect = 0.52 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 205 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGER 1171 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G DR + GAPG P P PV P G + G G SG Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSG 1073 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 GAPG A P P PRG E+G G G R Sbjct: 1073 GAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 205 GAPG + A P P GA + G G K+G + P GER Sbjct: 404 GAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGAR-GER 448
>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)| Length = 348 Score = 31.2 bits (69), Expect = 0.67 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = +1 Query: 97 RPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSE-QVPRGKDE----KDFEKRV 261 R P +PTR V + AA+IG+ K + TDSE ++ +GK + KD EK Sbjct: 95 RRQPLKPTRT---VEVDSKAAEIGKKGEDKTTQKDTTDSESELKQGKKDSKKGKDIEKGK 151 Query: 262 KECLKLPGGKRMGAGDAPR 318 +E L + G DA + Sbjct: 152 EEKLDAKKDSKKGKKDAEK 170
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 31.2 bits (69), Expect = 0.67 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 223 G PG +P P P P G + G G P + G P + GER I KY Sbjct: 234 GQPGADGSPGQPGPKGPNGPDGQPGADG-NPGAPGPAGPPGSPGERGICPKY 284
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 31.2 bits (69), Expect = 0.67 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G A DR + GAPG P P P P G + G G Q G Sbjct: 981 GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMG 1029 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGS-GPDGALTLPGA 70 P+ P +T P+GA G+ GP GA PGA Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA 832
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 31.2 bits (69), Expect = 0.67 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGR 175 P E G+ SA G+PG P P P P GA ++E+G G+ +GG Sbjct: 488 PGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDETGIAGLHLPNGGV 547 Query: 176 LRPRLNTGERP 208 L G +P Sbjct: 548 EGAVLGKGGKP 558
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 0.88 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRV----RAPSGPD--PVAPRGAVNESGCLGMQPKSGGRLRP 184 G++S+ + QVP V RAPS PD P PR S L +PK + +P Sbjct: 2327 GESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKP 2386 Query: 185 R 187 R Sbjct: 2387 R 2387
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 0.88 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G A DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGE 202 GAPG + PSG P PRG +G G +G G PR TGE Sbjct: 1113 GAPGE-QGPSGASGPAGPRGPPGSAGAAGKDGLNGLPGPIGPPGPRGRTGE 1162
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 30.8 bits (68), Expect = 0.88 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 P++ +GD+ A+ G PG P P P PRG G G Q +G R Sbjct: 281 PTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGER 337
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 0.88 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 205 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGER 1171 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G DR + GAPG P P PV P G + G G SG Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPSG 1073 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 SG + + GAPG A P P PRG E+G G G R Sbjct: 1057 SGKSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 0.88 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + G PG AP P PV P G + G G +G Sbjct: 1028 GSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076
>ELN_BOVIN (P04985) Elastin precursor (Tropoelastin)| Length = 747 Score = 30.8 bits (68), Expect = 0.88 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 234 FPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGAL--TLPGAP 67 F +R IG P F LG P +G P + A G+G GAL +PGAP Sbjct: 408 FGARGAVGIGGIPTFGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGGVGALGGVVPGAP 465
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 30.8 bits (68), Expect = 0.88 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 207 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 67 G+SP G PP L P +P + P GATG P G + PG P Sbjct: 151 GISPPGLFGERGPPGL---PGRPGPV-GPMGATGRAPKGDIPDPGPP 193
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 127 RASWGDRVRAGRGSHPPRRPFPGDL 53 RA W R +AG +HP PFPG L Sbjct: 267 RAKWRKREKAGVQAHPTGLPFPGPL 291
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 151 G A A DR + G+PG P GP P G E G G Sbjct: 620 GPAGPAGDRGEPGPSGSPGLQGLPGGPGPAGENGKPGEPGPKG 662
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +2 Query: 26 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 205 ++ SA+ ++PW P R PSG + + + + +G L P SGG + +G Sbjct: 864 ESGSASGDGEIPWSSTPTVDRLPSGGESLEGSASASGTGDLSGLP-SGGEITETSASGTE 922 Query: 206 PIA 214 I+ Sbjct: 923 EIS 925
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +2 Query: 32 SSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 + A R W+G + PSGP +A RG V G S G + P Sbjct: 868 AGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG G P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGP 741
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG G P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGP 741
>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog| Length = 217 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -1 Query: 165 DLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 22 D G +P+ P+GA SG G ++ + G W AED +P Sbjct: 7 DGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAP 54
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 G PG + P P PRGA G G P + GR+ P Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGF-PGAAGRVGP 874 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +2 Query: 62 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 205 ++G PG P G P+ PRG G G ++G RP GER Sbjct: 190 FQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRP----GER 233
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 223 G PG P P P P G + G G P G + P GER I KY Sbjct: 237 GQPGNDGTPGQPGPKGPPGPDGKPGADG-NPGQPGPVGPPGTPGERGICPKY 287 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -1 Query: 150 PKQPDSLTAPRGATGSGPDGALTLPGAP 67 P QP S AP GP+GA PGAP Sbjct: 174 PGQPGSDAAPGEQGPKGPNGAPGKPGAP 201
>RL15_STAEQ (Q5HM18) 50S ribosomal protein L15| Length = 146 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 65 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 211 K A G RVR G G + G G + +SGG+LRP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPL 57
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG G P P P RG R G G GR P Sbjct: 700 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGP 744
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/65 (23%), Positives = 30/65 (46%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 199 S D+ +T++ + +P + +PS +NE C+ P S L+P + Sbjct: 803 SNDSKESTEKPEKEKSKSPEKELSPSNSSSSNKESKMNEKSCI-KSPSSTESLQPTVKQS 861 Query: 200 ERPIA 214 ++P+A Sbjct: 862 DQPVA 866
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGR 175 P E +G+ +A G+PG P P P P GA +E+G G+ +GG Sbjct: 492 PGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGV 551 Query: 176 LRPRLNTGERP 208 L G +P Sbjct: 552 EGAVLGKGGKP 562 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGSGPDGALTLPGAP-FQG 58 P P L P G T G GA +PG P FQG Sbjct: 157 PPGPPGLPGPSGITIPGKPGAQGVPGPPGFQG 188
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 183 GRSLPPDLGCIPK--QPDSLTAPRGATGSGPDGALTLPGAPFQG 58 GR LPP LG PK Q +L A G+ D L G PF G Sbjct: 637 GRLLPPGLGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGG 680
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 25.4 bits (54), Expect(2) = 1.5 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Frame = +2 Query: 32 SSATDRAQVPWKGA---PGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 199 S+ R Q P G PG AP GP P+GA + Q GG RP+ G Sbjct: 224 STGMARPQAPRPGGAPRPGGAGAPGGP---RPQGAGGQDRAPRPQGGPGGAPRPQGGPG 279 Score = 23.1 bits (48), Expect(2) = 1.5 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = +1 Query: 280 PGGKRMGAGDAPRPYAER 333 PGG R G PRP A R Sbjct: 278 PGGARPTPGGMPRPQAPR 295
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/46 (39%), Positives = 18/46 (39%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPPPFRGARGGRSGGGPPNGRGGP 742
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 29.6 bits (65), Expect = 2.0 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = +2 Query: 29 ASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG----GRLRPRLNT 196 A + +RA+ P +G P+GP P PR + G P+SG G RP Sbjct: 269 AQAREERAERPDRGPRPAGARPAGPRPGGPRQGDSRPGDGRPAPRSGAPRPGGARPAAGF 328 Query: 197 GERPIA---NKYREGKMKRTLKRESKSA*NCREGSGWGPAMR 313 G+ A + + +G+ K+ ++ ++ +G+G G MR Sbjct: 329 GQPAQAENSSPFADGQSKKKRQKGRRTVEFGDKGAG-GKKMR 369
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 178 GAPG P P PV G + CLG + RL Sbjct: 643 GAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARL 679
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 GDA D Q KG PGR G PRGA E G G + GGR Sbjct: 493 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGAPGEKGEPGPRGPEGGR 539
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G+ R Q G PG V AP P P P+G E G G+ K G Sbjct: 624 GETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKG---EPGLTGLPEKPG 669 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGE 202 KG G AP P PV P+G+ G G++ + G G+ PR GE Sbjct: 1186 KGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGE 1236
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 G PG PSGP P P G +G G GG P Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGER 205 G+PG AP P P P G G G Q G G P + GE+ Sbjct: 632 GSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGSAGEK 679
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G DR + G PG AP P PV P G + G G +G Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1072 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +2 Query: 68 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYRE 229 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 403 GAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEE 462 Query: 230 GK 235 GK Sbjct: 463 GK 464
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 223 GAPG AP P PRG G G G +P GER + KY Sbjct: 145 GAPGHPGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQPG-PPGERGVCPKY 195
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 190 KG PG P P P G + G +GM + G R P L Sbjct: 965 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1006
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein| Length = 417 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -3 Query: 175 STARFG----LHSQTTRLVDRASWGDRVRAGRGSHPPRRPF 65 S RFG + S +T + SW DRVR P RPF Sbjct: 85 SPMRFGKRPRISSNSTSRSCKTSWADRVREAAAQRRPSRPF 125
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +2 Query: 26 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQP-KSGGRLRPRLNTG 199 ++ SA+ +VPW P R PSG + +P G+ + SG + SGG + +G Sbjct: 868 ESGSASGDGEVPWSHTPTVGRLPSGGE--SPEGSASASGTGDLSGLPSGGEITETSTSG 924
>CXA1_HUMAN (P17302) Gap junction alpha-1 protein (Connexin-43) (Cx43) (Gap| junction 43 kDa heart protein) Length = 381 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 267 LFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 127 LF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 159 LFKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 206
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 29.3 bits (64), Expect = 2.6 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRLRPRLNTGERPIANKY 223 GAPG AP P P P G +G LG + ++G G P+ G P + Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG--PAGVQG 295 Query: 224 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 G KR ++ E G GPA PG Sbjct: 296 APGPAGEEGKRGARG-----EPGGAGPAGPPG 322
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +2 Query: 65 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 193 +G PG AP P P PRG V SG G SG G PR N Sbjct: 1109 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN 1168 Query: 194 TGER 205 GER Sbjct: 1169 RGER 1172 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G DR + GAPG P P PV P G + G G +G Sbjct: 1026 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAG 1074 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 KG G P P+ PRGA E G G+ +G R Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGAR 320 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/46 (43%), Positives = 23/46 (50%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 205 G PG+ PSGP P GA+ SG G +SG RP GER Sbjct: 204 GEPGQA-GPSGPP--GPPGAIGPSGPAGKDGESGRPGRP----GER 242
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = -2 Query: 128 PRLVGRQGPGRTGLSPSQAPLSRGLG 51 P V R+ GRT SP APLSRG G Sbjct: 180 PPEVNRREEGRTSESPEVAPLSRGPG 205
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 190 KG PG V P P P G E G G+ G + P L Sbjct: 619 KGEPGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGL 660 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAP---RGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREGK 235 G PG P P P P RG V E G G + +SG + P P EGK Sbjct: 320 GLPGPRGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGK 378 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 SG + QV G PG P PV P GA G G Q G + P Sbjct: 955 SGALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEP 1009
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 62 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGG 172 W+ P R P D V PRG + GC G GG Sbjct: 1624 WRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGG 1660
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLN 193 GD D+ GAPG + + P+G E+G G++ G R +P N Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGETGLPGLKGDLGERGKPGWN 245
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +2 Query: 65 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 193 +G PG AP P P PRG V SG G SG G PR N Sbjct: 953 RGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGN 1012 Query: 194 TGER 205 GER Sbjct: 1013 RGER 1016 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + GAPG P P PV P G + G G SG Sbjct: 870 GAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSG 918 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 +G PG P GP P +G SG G K G R Sbjct: 569 QGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPR 605 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGE 202 GAPG + A P P G + G G K+G G PR GE Sbjct: 249 GAPGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGE 295 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 G PG AP P+ PRGA E G G+ +G R Sbjct: 132 GVPGEDGAPG---PMGPRGAPGERGRPGLPGAAGAR 164 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 GAPG P P P G G +G K G RP Sbjct: 42 GAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRP 80
>HSV2_EMENI (Q5B464) SVP1-like protein 2| Length = 317 Score = 28.9 bits (63), Expect = 3.3 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Frame = -1 Query: 237 IFPSRYLFAIGLSPVFSLGRSLP-----PDLGCIPKQPDSLTAPRGATGSGPDGALTLPG 73 +F Y FA S F LG P P LG + +P P+G G D + + G Sbjct: 231 VFSDVYSFA---SAHFELGEEEPGPTYAPPLGTVLGRP-----PKGVIGWSNDNTILVVG 282 Query: 72 APFQGTWARSVAED 31 + G W + V D Sbjct: 283 SGSDGRWEKFVLRD 296
>VP40_EHV1V (P84454) Capsid protein P40 (Virion structural gene 35 protein)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; Gene 35.5 protein; C-terminal peptide] Length = 646 Score = 28.9 bits (63), Expect = 3.3 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -1 Query: 279 QFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQP-DSLTAPRGATGS 103 Q QA L+K + P +Y + P ++ + P L IP QP ++ AP+ G Sbjct: 513 QPQAAPAGLYKPIPAVPPQYSQYQYIQPQHAVSAIVAPQLPGIPSQPTQAVLAPQVPAGE 572 Query: 102 GPDGALTLPG--APFQGTWARSVAE 34 P A + AP Q AR+ + Sbjct: 573 APGSAKVVAASTAPQQAEQARAAPQ 597
>VP40_EHV1B (P28936) Capsid protein P40 (Virion structural gene 35 protein)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; Gene 35.5 protein; C-terminal peptide] Length = 646 Score = 28.9 bits (63), Expect = 3.3 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -1 Query: 279 QFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQP-DSLTAPRGATGS 103 Q QA L+K + P +Y + P ++ + P L IP QP ++ AP+ G Sbjct: 513 QPQAAPAGLYKPIPAVPPQYSQYQYIQPQHAVSAIVAPQLPGIPSQPTQAVLAPQVPAGE 572 Query: 102 GPDGALTLPG--APFQGTWARSVAE 34 P A + AP Q AR+ + Sbjct: 573 APGSAKVVAASTAPQQAEQARAAPQ 597
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 28.9 bits (63), Expect = 3.3 Identities = 21/69 (30%), Positives = 31/69 (44%) Frame = +3 Query: 3 CRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWECSPNRAVDSV 182 CR + S PQ+RTG SP +G PRP + E RS+ V S + Sbjct: 274 CRCSSSTHRLPQQRTGTFSPQRGSPTP-SPRPGSPVPGSERRSSRPEVTPISLRGTKEGP 332 Query: 183 QG*IQARDR 209 + ++ RD+ Sbjct: 333 ETPLRPRDQ 341
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 G+PG AP P P P G G G Q +G R Sbjct: 138 GSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPR 173
>CNTP4_HUMAN (Q9C0A0) Contactin-associated protein-like 4 precursor (Cell| recognition molecule Caspr4) Length = 1308 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 92 PSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNT 196 PS PDPV G V ES C+ QP + R R ++ Sbjct: 1185 PSHPDPVTVTGHVTESSCMA-QPGTDATSRERTHS 1218
>RL15_STAES (Q8CRH9) 50S ribosomal protein L15| Length = 146 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 65 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 211 K A G RVR G G + G G + +SGG++RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPL 57
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + D + G PG AP P P P G E+G G + G Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG 202 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +2 Query: 68 GAPGRVRAPSG---PDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGERPIANKY 223 G PG AP P P P+GA G G +SG G P GE+ I KY Sbjct: 225 GPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKY 281
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 28.9 bits (63), Expect = 3.3 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -3 Query: 181 TESTARFGLHSQ-TTRLVDR---ASWGDRVRAGRGSHPPRRPFPGDLGPV 44 TESTAR LHS T VDR + G + R GR S R P G P+ Sbjct: 726 TESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPI 775
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 178 GAPG P P PV G + CLG + RL Sbjct: 644 GAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARL 680
>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)| Length = 1500 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/62 (27%), Positives = 22/62 (35%) Frame = +1 Query: 40 DGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQ 219 D P PS E +E E P+ P P P+ + Q P + Y E E Sbjct: 798 DQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPNYETEKPLEP 857 Query: 220 VP 225 P Sbjct: 858 AP 859
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 168 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 KG PG V AP PV P G + G G++ G Sbjct: 1338 KGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPG 1372 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G G+ P P V P+G ESG +G + SG Sbjct: 913 GFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSG 946
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 168 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 KG PG + AP PV P G + G G++ G Sbjct: 1338 KGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG 1372
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 +GAPG AP P P P+G + G G + G Sbjct: 48 QGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPG 82
>EFNB3_MOUSE (O35393) Ephrin-B3 precursor| Length = 340 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -1 Query: 207 GLSPVFSLGRSLPPDLGCIPKQPDS---LTAPRGATGSGPDGALTLPGAPFQGTWARSVA 37 G+ + +G+S P G +P++P S + RGA S G T+PG P +R Sbjct: 160 GMKVLLRVGQS--PRGGAVPRKPVSEMPMERDRGAAHSAEPGRDTIPGDPSSNATSRGAE 217 Query: 36 EDASP 22 P Sbjct: 218 GPLPP 222
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 28.5 bits (62), Expect = 4.4 Identities = 30/103 (29%), Positives = 37/103 (35%) Frame = +1 Query: 19 VWRRVLSDGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYR 198 VW R+ + P SP + G P +P R G+R G GR P A Sbjct: 104 VWSRLGARRPSCSPEQHGGKVARLQPPPTKAQPARGGRR----GRRRGRGRGGPGAA--- 156 Query: 199 RETDSEQVPRGKDEKDFEKRVKECLKLPGGKRMGAGDAPRPYA 327 D PR +R + PGG R GAG P A Sbjct: 157 ---DGLSDPR--------RRAPRTNRNPGGPRPGAGWTDGPGA 188
>GLGB_YEAST (P32775) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) Length = 704 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 Query: 297 HPLPSRQFQALFDSLFKVLFIFP 229 HPLP+ F DS KV+FI P Sbjct: 115 HPLPNGDFAIPHDSKIKVMFILP 137
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)| (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 181 KG G P P P PRG E G G Q +G R R Sbjct: 1452 KGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQVYAGRRRR 1490
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 28.1 bits (61), Expect = 5.7 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGM--------QPKSGGRLRPRLNTGE 202 +G PG P PRGA E+G G QP GR+ PR +G+ Sbjct: 951 QGTPGHSGESGPPGAPGPRGARGEAGGRGSQGPPGKDGQPGPSGRVGPRGPSGD 1004
>RCOR2_HUMAN (Q8IZ40) REST corepressor 2| Length = 523 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Frame = -1 Query: 198 PVFSLGRSLPPDLGCIPKQPD------SLTAPRGATGSGPDGALTLPGAPFQ 61 P GR L P L P QP +L APR + GP TL GAP + Sbjct: 468 PPLQQGRFLQPRLA--PNQPPPPLIRPALAAPRHSARPGPQPPPTLIGAPLE 517
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 12/68 (17%) Frame = +2 Query: 68 GAPGRVRAPSGPDP------------VAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 211 G PG AP P P PRG V E G G + ++G + P + P Sbjct: 319 GLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPP 378 Query: 212 ANKYREGK 235 EGK Sbjct: 379 GPSGEEGK 386
>1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2 alpha chain| precursor (MHC class I antigen Cw*2) Length = 366 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -3 Query: 184 WTESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 47 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYNRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP 129
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 223 G PG P P P P G + G G P + G+ GE+ I KY Sbjct: 201 GQPGHDGQPGAPGPKGPNGNPGQPGADG-NPGAPGQSGTPGGVGEKGICPKY 251
>LPIN1_HUMAN (Q14693) Lipin-1| Length = 890 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 Query: 6 RPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTS 137 + + L ++ RTG K+P L G P+ A++ SPH+ + +S Sbjct: 251 KSDSELVSKSTERTGQKNPEMLWLWGELPQAAKSSSPHKMKESS 294
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREG 232 KG PG V A P P G E G G+ G + P L GE I N R+G Sbjct: 621 KGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLR-GE--IGNPGRDG 673
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 101 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 21 G +GL PS A + PGP+L T Q Sbjct: 1044 GHSGLPPSPAKIGNSTNPGPALATNPQ 1070
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -1 Query: 207 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTW 52 G++P +LG + P + P S T+ G++G G GA GA GT+ Sbjct: 343 GIAPPLALG-AYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTY 393
>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)| Length = 419 Score = 28.1 bits (61), Expect = 5.7 Identities = 22/73 (30%), Positives = 28/73 (38%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 199 +GD D+ V G PG P +G E G G++ G R P LN Sbjct: 105 NGDIGEKGDQGPVGLPGVPGIPGKPGEKGDPGLKGDKGERGFSGLKGDPGERGEPGLNGT 164 Query: 200 ERPIANKYREGKM 238 + I REG M Sbjct: 165 KGSIG---REGPM 174
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -1 Query: 168 PDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 22 PDL + PDS A T SGP A PGAP G + ED P Sbjct: 19 PDLA--GRAPDSEAARAAPTPSGPPAAAAPPGAP--GDELYAALEDYHP 63
>Y2127_STRCO (P40182) Hypothetical protein SCO2127| Length = 191 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -1 Query: 186 LGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 31 + LPP P + D++ R ATG GA PGA WA + AED Sbjct: 1 MSEELPPSEAPRPDEADAVDETR-ATGE-TRGAAQEPGASDADAWATACAED 50
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 181 GDA +R KG PGR P P +G+ G G Q G + R Sbjct: 358 GDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGR 410
>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth| regulatory gene 11 protein) Length = 301 Score = 28.1 bits (61), Expect = 5.7 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Frame = +1 Query: 79 EGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQVPRGKDEKDFEKR 258 E P+ P P P G++ L +K+ R+ET PR + + E R Sbjct: 151 EPGEPLAPSPQEPQAVGRQSLL------------AKSPLRQETQEAPGPREEAKGQVEAR 198 Query: 259 VKEC--LKLPGGKRMGAGDAPRPYAE 330 + ++ PGG+ GD P P E Sbjct: 199 RESLDPVQEPGGQAEADGDVPGPRGE 224
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGR-----VRAPSG-PDPVAPRGAVNESGCLGMQPKSG 169 G+ A D GAPG R P G P P PRG E+G G Q + G Sbjct: 404 GEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGPRGPRGDPGEAGPQGDQGREG 458
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 101 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 21 G +GL PS A + PGP+L T Q Sbjct: 996 GHSGLPPSPAKIGNSTNPGPALATNPQ 1022
>TACC2_MOUSE (Q9JJG0) Transforming acidic coiled-coil-containing protein 2| Length = 1035 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = -1 Query: 150 PKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGT 1 P++P ++ P GP + ++ G+PF+ + + S D S GT Sbjct: 65 PEEPGCISEPPVVVPDGPRSSESVEGSPFRPSHSSSAVFDEDKPIASSGT 114
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 +G A D KG PGR P P PV PRG E G G + G Sbjct: 1600 TGRAGPPGDSGPPGEKGDPGR---PGPPGPVGPRGRDGEVGEKGDEGPPG 1646
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 G PGR P P P P G E G G +G R P Sbjct: 2822 GLPGRSGTPGLPGPPGPVGPPGERGFTGKDGPTGPRGPP 2860
>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament| protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1090 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 24 ETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARS 131 ET+ + + KSPG+ + G PA SP EA+S Sbjct: 512 ETKSRVKEEAKSPGEAKSPGEAKSPAEAKSPGEAKS 547
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 KG PG V AP P P G E G G+ G Sbjct: 619 KGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKG 653
>RIR1_HHV23 (P09853) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1144 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 16 VVWRRVLSDGPGPSPLERGAWEGESPVRPG 105 VV RR SDGP P + G+SP PG Sbjct: 242 VVVRRRWSDGPAPVAFPKPRRPGDSPGNPG 271
>NRX2A_RAT (Q63374) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1715 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 1548 GAPGVLLAPSAPAPNLPAGKMN 1569
>CT086_HUMAN (Q9BZ19) Hypothetical protein C20orf86| Length = 240 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYR 226 GA R+P G P+ A+ S C+ + + G + R GE PI+ +R Sbjct: 138 GASCLSRSPLGRTPLHVAAAMGRSDCIILLLQHGASIHDRDAKGETPISIAHR 190
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 27.7 bits (60), Expect = 7.4 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 5/95 (5%) Frame = +3 Query: 39 RRTGPKSPGKGRLGG*EPRP-----ARTLSPHEARSTSRVVWECSPNRAVDSVQG*IQAR 203 R GP +PG G + G P P +R L P E + R +P +A + G Sbjct: 48 RAAGPPTPGLGLVPGPGPGPGPGSVSRRLDPKEPLGSQRAT-SPTPKQASATAPG----- 101 Query: 204 DR*RTSTARER*KGL*KESQRVLEIAGREADGGRR 308 R S R +GL +G+EA+G RR Sbjct: 102 ---RESPRETRAQGL----------SGQEAEGPRR 123
>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor| Length = 3063 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 G PGR P P P P G + G G G R P Sbjct: 2818 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDSAMGPRGPP 2856
>US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to the N-terminus of| tre) (RN-tre) Length = 828 Score = 27.7 bits (60), Expect = 7.4 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = +1 Query: 52 PSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKY-RRETDSEQVPR 228 PSPL G E +P R P + R G TP +A+ RR++ E+ + Sbjct: 395 PSPLASGRRESGAPHRRHEHSPHPQS-RTG-----------TPERAQPPRRKSVEEESKK 442 Query: 229 GKDEKDFEKRVKECLKLPGGKRMGAGDAPRPY 324 KDE DF++ KLP G + D+ R Y Sbjct: 443 LKDEADFQR------KLPSGPQ----DSSRQY 464
>TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein| Length = 1723 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 46 PGPSPLERGAWEGESPVRPGPCRPT 120 P P P G+W G P PG RP+ Sbjct: 830 PPPQPEASGSWGGPPPPPPGNVRPS 854
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +2 Query: 86 RAPSGPD-PVAP----RGAVNESGCLGMQPKSGGRLRPRL 190 R+P GP P AP R A+ +GC + P RPRL Sbjct: 11 RSPQGPGGPAAPAATGRAALPSAGCCPLPPGRNSSSRPRL 50
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 211 G G P P P+G + +G G GGR P +N P+ Sbjct: 241 GPLGAAGPPGFPGAPGPKGEIGGAGSNGPSGPQGGRGEPGINGAVGPV 288
>NRX2B_RAT (Q63376) Neurexin-2-beta precursor (Neurexin II-beta)| Length = 662 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 495 GAPGVLLAPSAPAPNLPAGKMN 516
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -1 Query: 156 CIPKQPDSLTAPRGATGS-GPDGALTLPGAPFQG 58 CI K P L P G G GP G PGAP QG Sbjct: 133 CI-KCPQGLPGPAGVPGQPGPKGPNGNPGAPAQG 165
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 +GAPG+ A P P +G+ + G +G + ++G Sbjct: 210 QGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETG 244
>PTN13_HUMAN (Q12923) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1) (PTP-BAS) (Protein-tyrosine phosphatase PTPL1) (Fas-associated protein-tyrosine phosphatase 1) (FAP-1) Length = 2485 Score = 23.9 bits (50), Expect(2) = 8.2 Identities = 11/41 (26%), Positives = 19/41 (46%) Frame = -1 Query: 147 KQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDAS 25 K P + ++GSG D +T P TW+ ++ + S Sbjct: 1644 KSPSRRDSYSDSSGSGEDDLVTAPANISNSTWSSALHQTLS 1684 Score = 21.9 bits (45), Expect(2) = 8.2 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -3 Query: 304 RPPSASLPAISSTL*LSFQSP 242 RPP LP I + L QSP Sbjct: 1587 RPPPGVLPEIDTALLTPLQSP 1607
>ZBT38_HUMAN (Q8NAP3) Zinc finger and BTB domain-containing protein 38| Length = 1195 Score = 27.3 bits (59), Expect = 9.7 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 10/90 (11%) Frame = +1 Query: 85 ESPVRP----GPCRPTRRGQRVGLFGNAAQIGR*TPS-KAKYRRETDSEQVPRGKDEKDF 249 + P RP P + +R+ +++ + G +PS K KY E D +D+ Sbjct: 913 DKPWRPYYNYKPKKKSRQLKKMRKVNWRKEHGNRSPSHKCKYPAELDCAVGKAPQDKPFE 972 Query: 250 EKRVKECLKLP-----GGKRMGAGDAPRPY 324 E+ KE KL G K +GAG+ RP+ Sbjct: 973 EEETKEMPKLQCELCDGDKAVGAGNQGRPH 1002
>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)| Length = 317 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 G PGR P P P P G + G G G R P Sbjct: 17 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPP 55
>RS6_RHILO (Q984T8) 30S ribosomal protein S6| Length = 166 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -3 Query: 121 SWGDRVRAGRGSHPPRR--PFPGDLGPVR 41 S+GDR R RG PPR GD GP R Sbjct: 128 SFGDRDRGDRGDRPPRSFGDAGGDRGPRR 156
>GCSPA_AERPE (Q9YA15) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 471 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/61 (29%), Positives = 27/61 (44%) Frame = -1 Query: 297 HPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTAPR 118 HP +A+ D + + AIG+S V L R +PP + P++ DSL Sbjct: 9 HPWIPNSHKAILDEMLE-----------AIGVSSVDDLYRDIPPTILLSPEEWDSLPIGE 57 Query: 117 G 115 G Sbjct: 58 G 58
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 27.3 bits (59), Expect = 9.7 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Frame = +2 Query: 71 APGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL----RPRLNTGERPIANKYREGKM 238 +PG P P P+A R + + +GC P + G L RP ++ P A Sbjct: 200 SPGGTVQPKSPAPLAARCSASRAGC----PTAAGSLLPAPRPPASSASSPQAAAPAAPSA 255 Query: 239 KRTLKRESKSA*NCREGSGWGPAMRPGR 322 R +R + SA P+ RP R Sbjct: 256 TRLPRRTTPSAPR--------PSSRPAR 275
>YGIK_SALTY (P40800) Hypothetical protein ygiK| Length = 435 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 9/43 (20%) Frame = -1 Query: 264 FDSLFKVLFIFPSRYL---------FAIGLSPVFSLGRSLPPD 163 F+ ++ ++ +F S + FAIGLS +FS+ +LPPD Sbjct: 3 FEYIYPIIVLFGSFAIILAVGVPITFAIGLSSLFSILIALPPD 45
>SPTB2_HUMAN (Q01082) Spectrin beta chain, brain 1 (Spectrin, non-erythroid beta| chain 1) (Beta-II spectrin) (Fodrin beta chain) Length = 2364 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 199 RETDSEQVPRGKDEKDFEKRVKECLKL 279 RET SE + R KD +D +K +++C +L Sbjct: 1261 RETASELLMRLKDNRDLQKFLQDCQEL 1287
>RL15E_AERPE (Q9YBZ8) 50S ribosomal protein L15e| Length = 225 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +2 Query: 62 WKGAPG--RVRAPSGPDPVAPRGAVNESGCL--GMQPKSGGRLRPRLNTGERP 208 W+ P RV P+ D G + G + ++ + GGR +PR N G RP Sbjct: 32 WRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNKGRRP 84
>NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1712 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 1545 GAPGVLFAPSAPAPNLPAGKMN 1566
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G PG P P PRG GC G Q SG Sbjct: 112 GFPGADGIPGHPGQGGPRGRPGYDGCNGTQGDSG 145
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/51 (31%), Positives = 20/51 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 G A +A + + +G PG P P RG ESG G G R Sbjct: 559 GPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSR 609
>1C08_HUMAN (P30505) HLA class I histocompatibility antigen, Cw-8 alpha chain| precursor (MHC class I antigen Cw*8) Length = 366 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -3 Query: 184 WTESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 47 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGP 129
>1C05_HUMAN (Q9TNN7) HLA class I histocompatibility antigen, Cw-5 alpha chain| precursor (MHC class I antigen Cw*5) Length = 366 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -3 Query: 184 WTESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 47 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYKRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP 129
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLG--MQPKSGGRLRPRLN 193 GAP R R + VAPR A + G + ++GGR+ P +N Sbjct: 591 GAPARSRTSEYYEDVAPRFATPDPSLRGTPVPGQAGGRIPPPIN 634
>NRX2B_HUMAN (P58401) Neurexin-2-beta precursor (Neurexin II-beta)| Length = 666 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 499 GAPGVLFAPSAPAPNLPAGKMN 520
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 24 ETRPQRRTGPKSPGKGRLGG*EPRPARTLSP-HEARSTSR 140 E R +R GP PG GR GG P P +P AR SR Sbjct: 825 EKRSRRPRGP-GPGPGRRGGGGPAPGAPAAPAAAARGPSR 863
>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 1146 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/49 (32%), Positives = 18/49 (36%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G A A Q +G PG + P P P G E G G Q G Sbjct: 323 GPAGQAGRDGQPGERGEPGLMGIPGARGPPGPSGDTGEPGLTGPQGPPG 371
>CONG_BOVIN (P23805) Conglutinin precursor| Length = 371 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 205 KGAPG AP G SG +G Q SG R P L G+R Sbjct: 162 KGAPGETGAP------GRAGVTGPSGAIGPQGPSGARGPPGLK-GDR 201
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 14/44 (31%) Frame = +1 Query: 40 DGP--GPSP-LERGAW--------EGES---PVRPGPCRPTRRG 129 DGP GP+P L RG W G S RP PCR RRG Sbjct: 335 DGPADGPAPGLGRGGWGVGREAGGSGRSVRTAARPEPCRGLRRG 378
>SYT_PYRFU (Q8U176) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 625 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 199 RETDSEQVPRGKDEKDFEKRVKECLKLPGGKRMGAGDAPRP 321 +ET + V R +D K +E R++E +K K G PRP Sbjct: 572 KETGTITVRRREDGKQYETRIEELIKEIKQKTEGFPYKPRP 612
>MED18_SCHPO (O14198) RNA polymerase II mediator complex subunit 18 (Cell| separation protein sep11) (RNA polymerase II mediator complex protein pmc6) Length = 207 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/53 (35%), Positives = 30/53 (56%) Frame = -1 Query: 291 LPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDS 133 +PSR+F+A+ +SL K L + F + P + +PP+L P+QPDS Sbjct: 10 VPSRRFEAVVNSLSKTLDGPKTILEFWVVYRP-----KDVPPNL---PRQPDS 54
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -2 Query: 149 PNNPTR*PR-LVGRQGPGRTGLSPSQAPLSRGLGPGPSL 36 P PT+ P GPG G P+ +P G GPGP+L Sbjct: 39 PPQPTQPPPGPAAASGPGAAG--PASSPPPAGPGPGPAL 75
>PHK_NOCFA (Q5Z066) Probable phosphoketolase (EC 4.1.2.-)| Length = 822 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 300 PHPLPSRQFQALFDSLFKVLFIF 232 PH LP R+F LF + ++F F Sbjct: 699 PHGLPDREFDTLFTTASPIIFAF 721
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 184 G PGR P P P P G + G G G R P Sbjct: 2823 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPP 2861
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%) Frame = +1 Query: 43 GPGPSPL--ERGAWEGESPVRPGPCRP 117 GPGP PL AW P RPG RP Sbjct: 16 GPGPRPLWGPGPAWSPGFPARPGRGRP 42
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Frame = +1 Query: 43 GPGPSPLE--RGAWEGESPVRPGPCRPTRRGQRVG 141 GPGP P RG G P P P R R G+ G Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPFRGARGGRSGG 731
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 27.3 bits (59), Expect = 9.7 Identities = 21/61 (34%), Positives = 24/61 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 202 GDA ++ D GA G A P P G ESG G +G PR GE Sbjct: 649 GDAGNSGDYGNPGRDGARGPAGAAGAPGPAGGPGDRGESGPAGPSGVAG----PRGAPGE 704 Query: 203 R 205 R Sbjct: 705 R 705 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 +GAPG P RGA ESG G SG R Sbjct: 564 RGAPGDFGPPGSAGTRGERGAPGESGGAGPHGPSGSR 600
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/42 (23%), Positives = 20/42 (47%) Frame = +2 Query: 86 RAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 211 + P+GP P++ + N+ + P G P L++ P+ Sbjct: 1102 KPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPL 1143
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 205 G PGR P P P G + G G+ G GR P+ GER Sbjct: 788 GLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGER 838
>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor| Length = 1029 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/51 (39%), Positives = 20/51 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 GDA D Q KG PGR G PRG E G G GGR Sbjct: 503 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGTPGEKGEPGPPGPEGGR 549
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Frame = -2 Query: 140 PTR*PRL--VGRQG--PGRTGLSPSQAPLSRGLGPGPS 39 PT P L GR G PG G SPS A + G PG S Sbjct: 22 PTNIPGLGAAGRSGMTPGAAGFSPSAASDASGFSPGYS 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,103,432 Number of Sequences: 219361 Number of extensions: 1452065 Number of successful extensions: 7796 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 5899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7675 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
