>EMBP_CRIGR (P81448) Eosinophil granule major basic protein precursor (MBP)|
          Length = 206

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 171 GPSRCRVMPWGPGYWFSPSGWASFRPWRR 85
           G  RCR   W  G  ++ + WA+ +PW R
Sbjct: 149 GSGRCRRFQWVDGSRWNFAYWAAHQPWSR 177

>EMBP_HUMAN (P13727) Eosinophil granule major basic protein precursor (MBP)|
           (EMBP) (Pregnancy-associated major basic protein)
           (Proteoglycan 2, bone marrow) (BMPG)
          Length = 222

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 171 GPSRCRVMPWGPGYWFSPSGWASFRPWRR 85
           G  RCR   W  G  ++ + WA+ +PW R
Sbjct: 165 GSGRCRRFQWVDGSRWNFAYWAAHQPWSR 193

>ANA_DROME (Q26307) Protein anachronism precursor|
          Length = 474

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 80  HHRRHGRNEAQPEGENQ 130
           HHRRH  N  QPE E++
Sbjct: 392 HHRRHHHNHQQPESESE 408

>TOP1_VIBCH (Q9KRB2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 876

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 87  DAMGGTKPNPKARTNTLAPRASRGTG 164
           +++GG KPN    TN L P  SR  G
Sbjct: 589 ESLGGMKPNHIVMTNILCPTCSRPMG 614


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.138    0.492 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,616,851
Number of Sequences: 219361
Number of extensions: 296801
Number of successful extensions: 1360
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 80,573,946
effective HSP length: 33
effective length of database: 73,335,033
effective search space used: 1760040792
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)