ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467690.1| Oryza sativa (japonica cultivar-group), mRNA 176 3e-41
2dbj|AK099699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 3e-41
3gb|AY224491.1| Oryza sativa (japonica cultivar-group) isolate 30... 168 8e-39
4dbj|AK102187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 8e-39
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
6dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
7gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 76 9e-11
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 76 9e-11
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
11dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
12emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4,... 64 3e-07
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
14ref|NM_197705.1| Oryza sativa (japonica cultivar-group) hypothet... 60 5e-06
15ref|NM_195209.1| Oryza sativa (japonica cultivar-group) putative... 58 2e-05
16gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, c... 58 2e-05
17gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 54 3e-04
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 3e-04
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
20ref|XM_482475.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.31
21dbj|AK072791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.31
22dbj|AK069134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.31
23dbj|D16416.1|WHTWZF1B Triticum aestivum mRNA for zinc-finger pro... 44 0.31
24dbj|D16415.1|WHTWZF1A Triticum aestivum gene for zinc-finger pro... 44 0.31
25gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.2
26gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.2
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
29dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
30dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
31gb|AF156879.1|AF156879 Rhodospirillum rubrum (R)-specific trans-... 42 1.2
32dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
33gb|AF203882.1|AF203882 Astragalus sinicus dynamin homolog (DH1) ... 42 1.2
34ref|XM_471447.1| Oryza sativa (japonica cultivar-group), predic... 40 4.8
35ref|XM_360184.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.8
36gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.8
37ref|XM_753355.1| Ustilago maydis 521 hypothetical protein (UM023... 40 4.8
38emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.8
39emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
40gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 4.8
41gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 4.8
42gb|AY572858.2| Reticulitermes flavipes hexamerin I mRNA, complet... 40 4.8
43gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 4.8
44dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
45dbj|AP005674.5| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
46dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
47dbj|AK069447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
48dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
49emb|AL117190.6|CNS01DRF Human chromosome 14 DNA sequence BAC R-1... 40 4.8
50emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-5... 40 4.8 
>ref|XM_467690.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3215

 Score =  176 bits (89), Expect = 3e-41
 Identities = 110/117 (94%)
 Strand = Plus / Plus

                                                                       
Query: 247 caccttcctcaacgccgtcgcgctcggcaacgtcgggtccggcaagtcggccgtgctcaa 306
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 207 caccttcctcaacgccgtcgcgctcggcaacgtcggcgccggcaagtcggccgtgctcaa 266

                                                                    
Query: 307 ctccctcatcggccaccccgtgctgccgacgggggagaacggagccacgcgggcgcc 363
           |  |||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 267 cagcctcatcggccaccccgtgctgccgacgggtgagaacggggcgacgcgggcgcc 323



 Score =  123 bits (62), Expect = 4e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                       
Query: 96  ccccgaccggcctcgagatccctgcgcccatgtcgtcgtcggccatggacgccatcgtcg 155
           |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 56  ccccgaccagcctcgagatcccagcgcccatgtcgtcgtcggccatggaggccatggacg 115

                                         
Query: 156 agctcgtcgagctctccgagtccatgcgcc 185
           |||||||| ||||| |||||||||||||||
Sbjct: 116 agctcgtccagctcgccgagtccatgcgcc 145
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>dbj|AK099699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K16, full
           insert sequence
          Length = 3215

 Score =  176 bits (89), Expect = 3e-41
 Identities = 110/117 (94%)
 Strand = Plus / Plus

                                                                       
Query: 247 caccttcctcaacgccgtcgcgctcggcaacgtcgggtccggcaagtcggccgtgctcaa 306
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 207 caccttcctcaacgccgtcgcgctcggcaacgtcggcgccggcaagtcggccgtgctcaa 266

                                                                    
Query: 307 ctccctcatcggccaccccgtgctgccgacgggggagaacggagccacgcgggcgcc 363
           |  |||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 267 cagcctcatcggccaccccgtgctgccgacgggtgagaacggggcgacgcgggcgcc 323



 Score =  123 bits (62), Expect = 4e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                       
Query: 96  ccccgaccggcctcgagatccctgcgcccatgtcgtcgtcggccatggacgccatcgtcg 155
           |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 56  ccccgaccagcctcgagatcccagcgcccatgtcgtcgtcggccatggaggccatggacg 115

                                         
Query: 156 agctcgtcgagctctccgagtccatgcgcc 185
           |||||||| ||||| |||||||||||||||
Sbjct: 116 agctcgtccagctcgccgagtccatgcgcc 145
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>gb|AY224491.1| Oryza sativa (japonica cultivar-group) isolate 30846 dynamin-like
           protein mRNA, partial cds
          Length = 799

 Score =  168 bits (85), Expect = 8e-39
 Identities = 109/117 (93%)
 Strand = Plus / Plus

                                                                       
Query: 247 caccttcctcaacgccgtcgcgctcggcaacgtcgggtccggcaagtcggccgtgctcaa 306
           ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 18  caccttcctcaacgccgtcgcgctcggcaacgtcggggcgggcaagtcggccgtgctgaa 77

                                                                    
Query: 307 ctccctcatcggccaccccgtgctgccgacgggggagaacggagccacgcgggcgcc 363
           |  ||||||||||||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 78  cagcctcatcggccaccccgtgctgccgacgggggagaacggggcgacgagggcgcc 134
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>dbj|AK102187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086P03, full
           insert sequence
          Length = 3307

 Score =  168 bits (85), Expect = 8e-39
 Identities = 109/117 (93%)
 Strand = Plus / Plus

                                                                       
Query: 247 caccttcctcaacgccgtcgcgctcggcaacgtcgggtccggcaagtcggccgtgctcaa 306
           ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 321 caccttcctcaacgccgtcgcgctcggcaacgtcggggcgggcaagtcggccgtgctgaa 380

                                                                    
Query: 307 ctccctcatcggccaccccgtgctgccgacgggggagaacggagccacgcgggcgcc 363
           |  ||||||||||||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 381 cagcctcatcggccaccccgtgctgccgacgggggagaacggggcgacgagggcgcc 437
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 4e-25
 Identities = 83/90 (92%)
 Strand = Plus / Minus

                                                                            
Query: 96       ccccgaccggcctcgagatccctgcgcccatgtcgtcgtcggccatggacgccatcgtcg 155
                |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 30889611 ccccgaccagcctcgagatcccagcgcccatgtcgtcgtcggccatggaggccatggacg 30889552

                                              
Query: 156      agctcgtcgagctctccgagtccatgcgcc 185
                |||||||| ||||| |||||||||||||||
Sbjct: 30889551 agctcgtccagctcgccgagtccatgcgcc 30889522



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 285      ccggcaagtcggccgtgctcaactccctcatcggccaccccgtgctg 331
                |||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 30889315 ccggcaagtcggccgtgctcaacagcctcatcggccaccccgtgctg 30889269



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                   
Query: 247      caccttcctcaacgccgtcgcgctcggcaacgtcg 281
                |||||||||||||||||||||||||||||||||||
Sbjct: 30889460 caccttcctcaacgccgtcgcgctcggcaacgtcg 30889426



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 331      gccgacgggggagaacggagccacgcgggcgcc 363
                ||||||||| |||||||| || |||||||||||
Sbjct: 30889170 gccgacgggtgagaacggggcgacgcgggcgcc 30889138



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      cgccatcgtcgagctcgtcg 164
                ||||||||||||||||||||
Sbjct: 10205176 cgccatcgtcgagctcgtcg 10205157
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>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684F11
          Length = 147731

 Score =  123 bits (62), Expect = 4e-25
 Identities = 83/90 (92%)
 Strand = Plus / Minus

                                                                         
Query: 96    ccccgaccggcctcgagatccctgcgcccatgtcgtcgtcggccatggacgccatcgtcg 155
             |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 73188 ccccgaccagcctcgagatcccagcgcccatgtcgtcgtcggccatggaggccatggacg 73129

                                           
Query: 156   agctcgtcgagctctccgagtccatgcgcc 185
             |||||||| ||||| |||||||||||||||
Sbjct: 73128 agctcgtccagctcgccgagtccatgcgcc 73099



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                            
Query: 285   ccggcaagtcggccgtgctcaactccctcatcggccaccccgtgctg 331
             |||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 72892 ccggcaagtcggccgtgctcaacagcctcatcggccaccccgtgctg 72846



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                
Query: 247   caccttcctcaacgccgtcgcgctcggcaacgtcg 281
             |||||||||||||||||||||||||||||||||||
Sbjct: 73037 caccttcctcaacgccgtcgcgctcggcaacgtcg 73003



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 331   gccgacgggggagaacggagccacgcgggcgcc 363
             ||||||||| |||||||| || |||||||||||
Sbjct: 72747 gccgacgggtgagaacggggcgacgcgggcgcc 72715
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 120   cgcccatgtcgtcgtcggccatggacgccatcgtcgagctcgtcgagctctccgagtcca 179
             ||||||||||||||||||||||||| ||||| | | |||||||| ||||| |||||||||
Sbjct: 34934 cgcccatgtcgtcgtcggccatggaggccatggacaagctcgtccagctcgccgagtcca 34993

               
Query: 180   tg 181
             ||
Sbjct: 34994 tg 34995



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 247   caccttcctcaacgccgtcgcgctcggcaacgtcg 281
             |||||||||||||||||||||||| ||||||||||
Sbjct: 35064 caccttcctcaacgccgtcgcgcttggcaacgtcg 35098
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 120      cgcccatgtcgtcgtcggccatggacgccatcgtcgagctcgtcgagctctccgagtcca 179
                ||||||||||||||||||||||||| ||||| | | |||||||| ||||| |||||||||
Sbjct: 21359921 cgcccatgtcgtcgtcggccatggaggccatggacaagctcgtccagctcgccgagtcca 21359980

                  
Query: 180      tg 181
                ||
Sbjct: 21359981 tg 21359982



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 247      caccttcctcaacgccgtcgcgctcggcaacgtcg 281
                |||||||||||||||||||||||| ||||||||||
Sbjct: 21360051 caccttcctcaacgccgtcgcgcttggcaacgtcg 21360085



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 247     caccttcctcaacgccgtcgcgctcggcaacgt 279
               ||||||| |||||||||||||||||||||||||
Sbjct: 5492480 caccttcgtcaacgccgtcgcgctcggcaacgt 5492512



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 295     ggccgtgctcaactccctcatcggccaccccgtgctg 331
               ||||||||| |||  |||||||||||||||| |||||
Sbjct: 5492616 ggccgtgctgaacagcctcatcggccaccccatgctg 5492652
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 120      cgcccatgtcgtcgtcggccatggacgccatcgtcgagctcgtcgagctctccgagtcca 179
                ||||||||||||||||||||||||| ||||| | | |||||||| ||||| |||||||||
Sbjct: 21371184 cgcccatgtcgtcgtcggccatggaggccatggacaagctcgtccagctcgccgagtcca 21371243

                  
Query: 180      tg 181
                ||
Sbjct: 21371244 tg 21371245



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 247      caccttcctcaacgccgtcgcgctcggcaacgtcg 281
                |||||||||||||||||||||||| ||||||||||
Sbjct: 21371314 caccttcctcaacgccgtcgcgcttggcaacgtcg 21371348



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 247     caccttcctcaacgccgtcgcgctcggcaacgt 279
               ||||||| |||||||||||||||||||||||||
Sbjct: 5493267 caccttcgtcaacgccgtcgcgctcggcaacgt 5493299



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 295     ggccgtgctcaactccctcatcggccaccccgtgctg 331
               ||||||||| |||  |||||||||||||||| |||||
Sbjct: 5493403 ggccgtgctgaacagcctcatcggccaccccatgctg 5493439
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                  
Query: 247     caccttcctcaacgccgtcgcgctcggcaacgtcg 281
               |||||||||||||||||||||||||||||||||||
Sbjct: 7672871 caccttcctcaacgccgtcgcgctcggcaacgtcg 7672905



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                            
Query: 287     ggcaagtcggccgtgctcaactccctcatcggccaccccgtgctg 331
               ||||||||||||||||| |||  ||||||||||||||||||||||
Sbjct: 7673023 ggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctg 7673067



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 326     gtgctgccgacgggggagaacggagccacgcgggcgcc 363
               |||| |||||||||||||||||| || ||| |||||||
Sbjct: 7673170 gtgcagccgacgggggagaacggggcgacgagggcgcc 7673207
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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1136_C11
          Length = 124827

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                
Query: 247   caccttcctcaacgccgtcgcgctcggcaacgtcg 281
             |||||||||||||||||||||||||||||||||||
Sbjct: 96126 caccttcctcaacgccgtcgcgctcggcaacgtcg 96160



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 287   ggcaagtcggccgtgctcaactccctcatcggccaccccgtgctg 331
             ||||||||||||||||| |||  ||||||||||||||||||||||
Sbjct: 96278 ggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctg 96322



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 326   gtgctgccgacgggggagaacggagccacgcgggcgcc 363
             |||| |||||||||||||||||| || ||| |||||||
Sbjct: 96425 gtgcagccgacgggggagaacggggcgacgagggcgcc 96462
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>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
              complete sequence
          Length = 149892

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 122    cccatgtcgtcgtcggccatggacgccatcgtcgagctcgtcgagctctccgagtccatg 181
              |||||||||||||| ||||| || ||||| | ||||||| || ||||| |||||||||||
Sbjct: 102141 cccatgtcgtcgtcagccattgaggccatggacgagctcatccagctcgccgagtccatg 102082

                  
Query: 182    cgcc 185
              ||||
Sbjct: 102081 cgcc 102078



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 247    caccttcctcaacgccgtcgcgctcggcaacgtc 280
              |||||||||||||||||||||||| |||||||||
Sbjct: 102017 caccttcctcaacgccgtcgcgcttggcaacgtc 101984
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 122      cccatgtcgtcgtcggccatggacgccatcgtcgagctcgtcgagctctccgagtccatg 181
                |||||||||||||| ||||| || ||||| | ||||||| || ||||| |||||||||||
Sbjct: 29299095 cccatgtcgtcgtcagccattgaggccatggacgagctcatccagctcgccgagtccatg 29299036

                    
Query: 182      cgcc 185
                ||||
Sbjct: 29299035 cgcc 29299032



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 247      caccttcctcaacgccgtcgcgctcggcaacgtc 280
                |||||||||||||||||||||||| |||||||||
Sbjct: 29298971 caccttcctcaacgccgtcgcgcttggcaacgtc 29298938



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 337      gggggagaacggagccacgc 356
                ||||||||||||||||||||
Sbjct: 11079251 gggggagaacggagccacgc 11079232
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>ref|NM_197705.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0010C11.9), mRNA
          Length = 336

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 247 caccttcctcaacgccgtcgcgctcggcaacgtc 280
           |||||||||||||||||||||||| |||||||||
Sbjct: 111 caccttcctcaacgccgtcgcgcttggcaacgtc 144
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>ref|NM_195209.1| Oryza sativa (japonica cultivar-group) putative dynamin-like
           protein (OSJNBa0029P16.9), mRNA
          Length = 237

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 247 caccttcctcaacgccgtcgcgctcggcaacgt 279
           ||||||| |||||||||||||||||||||||||
Sbjct: 108 caccttcgtcaacgccgtcgcgctcggcaacgt 140
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>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence
          Length = 173644

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 247   caccttcctcaacgccgtcgcgctcggcaacgt 279
             ||||||| |||||||||||||||||||||||||
Sbjct: 51168 caccttcgtcaacgccgtcgcgctcggcaacgt 51136



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 295   ggccgtgctcaactccctcatcggccaccccgtgctg 331
             ||||||||| |||  |||||||||||||||| |||||
Sbjct: 51032 ggccgtgctgaacagcctcatcggccaccccatgctg 50996
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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
             sequence
          Length = 163712

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 247   caccttcctcaacgccgtcgcgctcggcaacgtcg 281
             ||||||| |||| ||||||||||||||||||||||
Sbjct: 85864 caccttcgtcaatgccgtcgcgctcggcaacgtcg 85898



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 295   ggccgtgctcaactccctcatcggccaccccgtgctg 331
             ||||||||| |||  |||||||||||||||| |||||
Sbjct: 86000 ggccgtgctgaacagcctcatcggccaccccatgctg 86036
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 247      caccttcctcaacgccgtcgcgctcggcaacgtcg 281
                ||||||| |||| ||||||||||||||||||||||
Sbjct: 29685513 caccttcgtcaatgccgtcgcgctcggcaacgtcg 29685479



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 295      ggccgtgctcaactccctcatcggccaccccgtgctg 331
                ||||||||| |||  |||||||||||||||| |||||
Sbjct: 29685377 ggccgtgctgaacagcctcatcggccaccccatgctg 29685341
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 247      caccttcctcaacgccgtcgcgctcggcaacgtcg 281
                ||||||| |||| ||||||||||||||||||||||
Sbjct: 29776935 caccttcgtcaatgccgtcgcgctcggcaacgtcg 29776901



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 295      ggccgtgctcaactccctcatcggccaccccgtgctg 331
                ||||||||| |||  |||||||||||||||| |||||
Sbjct: 29776799 ggccgtgctgaacagcctcatcggccaccccatgctg 29776763
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>ref|XM_482475.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3182

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 249 ccttcctcaacgccgtcgcgctcggcaacgtcgg 282
           ||||||||| || |||||||||||||||| ||||
Sbjct: 351 ccttcctcaccgtcgtcgcgctcggcaacatcgg 384
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>dbj|AK072791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141K11, full
           insert sequence
          Length = 1831

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 249 ccttcctcaacgccgtcgcgctcggcaacgtcgg 282
           ||||||||| || |||||||||||||||| ||||
Sbjct: 332 ccttcctcaccgtcgtcgcgctcggcaacatcgg 365
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>dbj|AK069134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E19, full
           insert sequence
          Length = 3183

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 249 ccttcctcaacgccgtcgcgctcggcaacgtcgg 282
           ||||||||| || |||||||||||||||| ||||
Sbjct: 351 ccttcctcaccgtcgtcgcgctcggcaacatcgg 384
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>dbj|D16416.1|WHTWZF1B Triticum aestivum mRNA for zinc-finger protein WZF1, complete cds
          Length = 1254

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 123 ccatgtcgtcgtcggccatgga 144
           ||||||||||||||||||||||
Sbjct: 127 ccatgtcgtcgtcggccatgga 148
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>dbj|D16415.1|WHTWZF1A Triticum aestivum gene for zinc-finger protein WZF1, complete cds
          Length = 2862

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 123  ccatgtcgtcgtcggccatgga 144
            ||||||||||||||||||||||
Sbjct: 1236 ccatgtcgtcgtcggccatgga 1257
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 258     acgccgtcgcgctcggcaacg 278
               |||||||||||||||||||||
Sbjct: 5385628 acgccgtcgcgctcggcaacg 5385648
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 120     cgcccatgtcgtcgtcggcca 140
               |||||||||||||||||||||
Sbjct: 3415027 cgcccatgtcgtcgtcggcca 3415047
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 249      ccttcctcaacgccgtcgcgctcggcaac 277
                ||||||||| || ||||||||||||||||
Sbjct: 20401329 ccttcctcaccgtcgtcgcgctcggcaac 20401357
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 127      gtcgtcgtcggccatggacgc 147
                |||||||||||||||||||||
Sbjct: 27063414 gtcgtcgtcggccatggacgc 27063394
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>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0671D01
          Length = 163006

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 127    gtcgtcgtcggccatggacgc 147
              |||||||||||||||||||||
Sbjct: 122245 gtcgtcgtcggccatggacgc 122225
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>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0056L09
          Length = 152910

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 249    ccttcctcaacgccgtcgcgctcggcaac 277
              ||||||||| || ||||||||||||||||
Sbjct: 149077 ccttcctcaccgtcgtcgcgctcggcaac 149105
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>gb|AF156879.1|AF156879 Rhodospirillum rubrum (R)-specific trans-2,3-enoylacyl-CoA hydratase
            (phaJ) gene, complete cds
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 120  cgcccatgtcgtcgtcggcca 140
            |||||||||||||||||||||
Sbjct: 1067 cgcccatgtcgtcgtcggcca 1087
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>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0456B03
          Length = 152973

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 249   ccttcctcaacgccgtcgcgctcggcaac 277
             ||||||||| || ||||||||||||||||
Sbjct: 31959 ccttcctcaccgtcgtcgcgctcggcaac 31987
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>gb|AF203882.1|AF203882 Astragalus sinicus dynamin homolog (DH1) mRNA, complete cds
          Length = 3435

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 254 ctcaacgccgtcgcgctcggcaacgtcgg 282
           ||||||| |||||| ||||||||||||||
Sbjct: 360 ctcaacgtcgtcgcactcggcaacgtcgg 388
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>ref|XM_471447.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2145

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 gggggagaacggagccacgc 356
           ||||||||||||||||||||
Sbjct: 67  gggggagaacggagccacgc 48
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>ref|XM_360184.1| Magnaporthe grisea 70-15 hypothetical protein (MG05558.4) partial
           mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 ctgccgacgggggagaacgg 348
           ||||||||||||||||||||
Sbjct: 364 ctgccgacgggggagaacgg 383
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     cgccgtcgcgctcggcaacg 278
               ||||||||||||||||||||
Sbjct: 2888393 cgccgtcgcgctcggcaacg 2888412
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>ref|XM_753355.1| Ustilago maydis 521 hypothetical protein (UM02301.1) partial mRNA
          Length = 1944

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  catgtcgtcgtcggccatgg 143
            ||||||||||||||||||||
Sbjct: 1047 catgtcgtcgtcggccatgg 1066
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     cgccgtcgcgctcggcaacg 278
               ||||||||||||||||||||
Sbjct: 1066974 cgccgtcgcgctcggcaacg 1066993
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>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
             complete sequence
          Length = 142814

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   gggggagaacggagccacgc 356
             ||||||||||||||||||||
Sbjct: 87906 gggggagaacggagccacgc 87887
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 134     tcggccatggacgccatcgtcgag 157
               |||||||| |||||||||||||||
Sbjct: 3317182 tcggccatcgacgccatcgtcgag 3317205
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    cgccgtcgcgctcggcaacg 278
              ||||||||||||||||||||
Sbjct: 661655 cgccgtcgcgctcggcaacg 661674
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>gb|AY572858.2| Reticulitermes flavipes hexamerin I mRNA, complete cds
          Length = 3242

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tccgcctccaatttcctcgc 54
           ||||||||||||||||||||
Sbjct: 517 tccgcctccaatttcctcgc 536



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 tccgcctccaatttcctcgc 54
          ||||||||||||||||||||
Sbjct: 46 tccgcctccaatttcctcgc 65
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     cgccgtcgcgctcggcaacg 278
               ||||||||||||||||||||
Sbjct: 1609207 cgccgtcgcgctcggcaacg 1609226
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 247      caccttcctcaacgccgtcg 266
                ||||||||||||||||||||
Sbjct: 11270356 caccttcctcaacgccgtcg 11270337
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>dbj|AP005674.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1126F07
          Length = 125007

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   caccttcctcaacgccgtcg 266
             ||||||||||||||||||||
Sbjct: 84334 caccttcctcaacgccgtcg 84315
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>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0055M07
          Length = 150901

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cgccatcgtcgagctcgtcg 164
             ||||||||||||||||||||
Sbjct: 77542 cgccatcgtcgagctcgtcg 77523
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>dbj|AK069447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019B19, full
           insert sequence
          Length = 2558

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 gggggagaacggagccacgc 356
           ||||||||||||||||||||
Sbjct: 128 gggggagaacggagccacgc 109
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>dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0438G07
          Length = 138878

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    caccttcctcaacgccgtcg 266
              ||||||||||||||||||||
Sbjct: 110332 caccttcctcaacgccgtcg 110313
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>emb|AL117190.6|CNS01DRF Human chromosome 14 DNA sequence BAC R-123M6 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165049

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  tcatcggccaccccgtgctg 331
            ||||||||||||||||||||
Sbjct: 5079 tcatcggccaccccgtgctg 5060
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>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185799

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    tcatcggccaccccgtgctg 331
              ||||||||||||||||||||
Sbjct: 180452 tcatcggccaccccgtgctg 180433


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,205,325
Number of Sequences: 3902068
Number of extensions: 1205325
Number of successful extensions: 25144
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24329
Number of HSP's gapped (non-prelim): 815
length of query: 363
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 341
effective length of database: 17,147,199,772
effective search space: 5847195122252
effective search space used: 5847195122252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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