ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl42f03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3279 Score = 412 bits (208), Expect = e-112 Identities = 346/392 (88%) Strand = Plus / Plus Query: 11 attgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgct 70 ||||||||||| || || ||||| |||||||| || ||||| ||||| || ||||| || Sbjct: 673 attgagaatattgatccaatgggcgtgcatacgggggattccatcacggtcgcgcccgcg 732 Query: 71 cagactctcactgataaggagtaccagagactcagggactactccgtggccatcatccgg 130 ||||| ||||| || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 733 cagacgctcaccgacaaggagtaccagaggctcagggactactccgtggcgatcatccgg 792 Query: 131 gagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccctgcagacggg 190 |||||||| |||||||| || ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 793 gagattggcgtggagtgtgggggttccaatgtgcagttcgcggtgaaccctgccgatggg 852 Query: 191 gaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctcttgcatcaaag 250 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 853 gaggtgatggtgattgagatgaaccccagggtgtcgaggtcatcagctcttgcatcaaag 912 Query: 251 gccactgggtttccgatagccaagatggcagcaaaactctcagtaggctatacgttggac 310 || || ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 913 gcgacagggtttccgattgccaagatggctgcaaagctctctgtaggttatactttggac 972 Query: 311 cagattccaaatgatatcacaaagaagacgcctgctagctttgagccctccattgactat 370 ||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 973 cagattccaaatgatattacgaagaagactcctgctagctttgagccttccattgactac 1032 Query: 371 gttgtcacaaagataccgcgatttgcgtttga 402 || ||||| ||||| || || ||||| ||||| Sbjct: 1033 gtggtcactaagattccacggtttgcatttga 1064
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 404 bits (204), Expect = e-110 Identities = 327/368 (88%) Strand = Plus / Plus Query: 11 attgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgct 70 ||||||||||| || || ||||| |||||||| || ||||| ||||| || ||||| || Sbjct: 21889810 attgagaatattgatccaatgggcgtgcatacgggggattccatcacggtcgcgcccgcg 21889869 Query: 71 cagactctcactgataaggagtaccagagactcagggactactccgtggccatcatccgg 130 ||||| ||||| || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 21889870 cagacgctcaccgacaaggagtaccagaggctcagggactactccgtggcgatcatccgg 21889929 Query: 131 gagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccctgcagacggg 190 |||||||| |||||||| || ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 21889930 gagattggcgtggagtgtgggggttccaatgtgcagttcgcggtgaaccctgccgatggg 21889989 Query: 191 gaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctcttgcatcaaag 250 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 21889990 gaggtgatggtgattgagatgaaccccagggtgtcgaggtcatcagctcttgcatcaaag 21890049 Query: 251 gccactgggtttccgatagccaagatggcagcaaaactctcagtaggctatacgttggac 310 || || ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 21890050 gcgacagggtttccgattgccaagatggctgcaaagctctctgtaggttatactttggac 21890109 Query: 311 cagattccaaatgatatcacaaagaagacgcctgctagctttgagccctccattgactat 370 ||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 21890110 cagattccaaatgatattacgaagaagactcctgctagctttgagccttccattgactac 21890169 Query: 371 gttgtcac 378 || ||||| Sbjct: 21890170 gtggtcac 21890177
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 404 bits (204), Expect = e-110 Identities = 327/368 (88%) Strand = Plus / Plus Query: 11 attgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgct 70 ||||||||||| || || ||||| |||||||| || ||||| ||||| || ||||| || Sbjct: 119103 attgagaatattgatccaatgggcgtgcatacgggggattccatcacggtcgcgcccgcg 119162 Query: 71 cagactctcactgataaggagtaccagagactcagggactactccgtggccatcatccgg 130 ||||| ||||| || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 119163 cagacgctcaccgacaaggagtaccagaggctcagggactactccgtggcgatcatccgg 119222 Query: 131 gagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccctgcagacggg 190 |||||||| |||||||| || ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 119223 gagattggcgtggagtgtgggggttccaatgtgcagttcgcggtgaaccctgccgatggg 119282 Query: 191 gaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctcttgcatcaaag 250 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 119283 gaggtgatggtgattgagatgaaccccagggtgtcgaggtcatcagctcttgcatcaaag 119342 Query: 251 gccactgggtttccgatagccaagatggcagcaaaactctcagtaggctatacgttggac 310 || || ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 119343 gcgacagggtttccgattgccaagatggctgcaaagctctctgtaggttatactttggac 119402 Query: 311 cagattccaaatgatatcacaaagaagacgcctgctagctttgagccctccattgactat 370 ||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 119403 cagattccaaatgatattacgaagaagactcctgctagctttgagccttccattgactac 119462 Query: 371 gttgtcac 378 || ||||| Sbjct: 119463 gtggtcac 119470
>ref|NM_102730.1| Arabidopsis thaliana CARB (CARBAMOYL PHOSPHATE SYNTHETASE B); ATP binding / carbamoyl-phosphate synthase/ ligase AT1G29900 (CARB) mRNA, complete cds Length = 3909 Score = 168 bits (85), Expect = 9e-39 Identities = 322/401 (80%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| |||||||||||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct: 1077 atctgttccattgagaatattgatcctatgggtgtgcacactggtgattccatcactgtg 1136 Query: 62 gcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggcc 121 || ||||| |||||||| || |||| ||||||||| | || ||||| || ||| | || Sbjct: 1137 gcacctgcacagactctaacggatagagagtaccagcggcttagggattattccattgcg 1196 Query: 122 atcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccct 181 || || |||||||||||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1197 attatacgggagattggtgttgagtgtggtggatctaatgtgcagtttgctgtcaacccg 1256 Query: 182 gcagacggggaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctctt 241 | || || || || ||| | || ||||||||||| ||||| ||||| || || |||||| Sbjct: 1257 gttgatggtgaagttatgatcatagagatgaaccctagggtctcaagatcttctgctctt 1316 Query: 242 gcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagtaggctat 301 || || ||||| || |||||||| || || || ||||| || || | || || |||||| Sbjct: 1317 gcttccaaggctacagggtttcccattgctaaaatggctgccaagttgtctgttggctat 1376 Query: 302 acgttggaccagattccaaatgatatcacaaagaagacgcctgctagctttgagccctcc 361 || ||||| |||||||| ||||||||||| | ||| || || |||||||| ||||||||| Sbjct: 1377 accttggatcagattcctaatgatatcacgaggaaaacaccggctagcttcgagccctcc 1436 Query: 362 attgactatgttgtcacaaagataccgcgatttgcgtttga 402 || || ||||| || || ||||| || |||||||| ||||| Sbjct: 1437 atcgattatgtggtgactaagattcctcgatttgcatttga 1477
>gb|AY133548.1| Arabidopsis thaliana At1g29900/F1N18_6 mRNA, complete cds Length = 3564 Score = 168 bits (85), Expect = 9e-39 Identities = 322/401 (80%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| |||||||||||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct: 967 atctgttccattgagaatattgatcctatgggtgtgcacactggtgattccatcactgtg 1026 Query: 62 gcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggcc 121 || ||||| |||||||| || |||| ||||||||| | || ||||| || ||| | || Sbjct: 1027 gcacctgcacagactctaacggatagagagtaccagcggcttagggattattccattgcg 1086 Query: 122 atcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccct 181 || || |||||||||||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1087 attatacgggagattggtgttgagtgtggtggatctaatgtgcagtttgctgtcaacccg 1146 Query: 182 gcagacggggaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctctt 241 | || || || || ||| | || ||||||||||| ||||| ||||| || || |||||| Sbjct: 1147 gttgatggtgaagttatgatcatagagatgaaccctagggtctcaagatcttctgctctt 1206 Query: 242 gcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagtaggctat 301 || || ||||| || |||||||| || || || ||||| || || | || || |||||| Sbjct: 1207 gcttccaaggctacagggtttcccattgctaaaatggctgccaagttgtctgttggctat 1266 Query: 302 acgttggaccagattccaaatgatatcacaaagaagacgcctgctagctttgagccctcc 361 || ||||| |||||||| ||||||||||| | ||| || || |||||||| ||||||||| Sbjct: 1267 accttggatcagattcctaatgatatcacgaggaaaacaccggctagcttcgagccctcc 1326 Query: 362 attgactatgttgtcacaaagataccgcgatttgcgtttga 402 || || ||||| || || ||||| || |||||||| ||||| Sbjct: 1327 atcgattatgtggtgactaagattcctcgatttgcatttga 1367
>gb|AF367268.1|AF367268 Arabidopsis thaliana At1g29900/F1N18_6 mRNA, complete cds Length = 3909 Score = 168 bits (85), Expect = 9e-39 Identities = 322/401 (80%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| |||||||||||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct: 1077 atctgttccattgagaatattgatcctatgggtgtgcacactggtgattccatcactgtg 1136 Query: 62 gcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggcc 121 || ||||| |||||||| || |||| ||||||||| | || ||||| || ||| | || Sbjct: 1137 gcacctgcacagactctaacggatagagagtaccagcggcttagggattattccattgcg 1196 Query: 122 atcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccct 181 || || |||||||||||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1197 attatacgggagattggtgttgagtgtggtggatctaatgtgcagtttgctgtcaacccg 1256 Query: 182 gcagacggggaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctctt 241 | || || || || ||| | || ||||||||||| ||||| ||||| || || |||||| Sbjct: 1257 gttgatggtgaagttatgatcatagagatgaaccctagggtctcaagatcttctgctctt 1316 Query: 242 gcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagtaggctat 301 || || ||||| || |||||||| || || || ||||| || || | || || |||||| Sbjct: 1317 gcttccaaggctacagggtttcccattgctaaaatggctgccaagttgtctgttggctat 1376 Query: 302 acgttggaccagattccaaatgatatcacaaagaagacgcctgctagctttgagccctcc 361 || ||||| |||||||| ||||||||||| | ||| || || |||||||| ||||||||| Sbjct: 1377 accttggatcagattcctaatgatatcacgaggaaaacaccggctagcttcgagccctcc 1436 Query: 362 attgactatgttgtcacaaagataccgcgatttgcgtttga 402 || || ||||| || || ||||| || |||||||| ||||| Sbjct: 1437 atcgattatgtggtgactaagattcctcgatttgcatttga 1477
>gb|U40341.1|ATU40341 Arabidopsis thaliana carbamoyl phosphate synthetase large chain (CARB) mRNA, complete cds Length = 3677 Score = 168 bits (85), Expect = 9e-39 Identities = 322/401 (80%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| |||||||||||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct: 973 atctgttccattgagaatattgatcctatgggtgtgcacactggtgattccatcactgtg 1032 Query: 62 gcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggcc 121 || ||||| |||||||| || |||| ||||||||| | || ||||| || ||| | || Sbjct: 1033 gcacctgcacagactctaacggatagagagtaccagcggcttagggattattccattgcg 1092 Query: 122 atcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccct 181 || || |||||||||||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1093 attatacgggagattggtgttgagtgtggtggatctaatgtgcagtttgctgtcaacccg 1152 Query: 182 gcagacggggaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctctt 241 | || || || || ||| | || ||||||||||| ||||| ||||| || || |||||| Sbjct: 1153 gttgatggtgaagttatgatcatagagatgaaccctagggtctcaagatcttctgctctt 1212 Query: 242 gcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagtaggctat 301 || || ||||| || |||||||| || || || ||||| || || | || || |||||| Sbjct: 1213 gcttccaaggctacagggtttcccattgctaaaatggctgccaagttgtctgttggctat 1272 Query: 302 acgttggaccagattccaaatgatatcacaaagaagacgcctgctagctttgagccctcc 361 || ||||| |||||||| ||||||||||| | ||| || || |||||||| ||||||||| Sbjct: 1273 accttggatcagattcctaatgatatcacgaggaaaacaccggctagcttcgagccctcc 1332 Query: 362 attgactatgttgtcacaaagataccgcgatttgcgtttga 402 || || ||||| || || ||||| || |||||||| ||||| Sbjct: 1333 atcgattatgtggtgactaagattcctcgatttgcatttga 1373
>emb|AJ319872.1|NTA319872 Nicotiana tabacum mRNA for putative carbamoyl phosphate synthase large subunit (CT4 gene) Length = 3947 Score = 161 bits (81), Expect = 2e-36 Identities = 318/397 (80%) Strand = Plus / Plus Query: 11 attgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgct 70 ||||||||||| || || ||||| || ||||| || || || ||||| ||||| |||||| Sbjct: 1092 attgagaatattgatcctatgggagttcatacgggggactccatcactgtggctcctgct 1151 Query: 71 cagactctcactgataaggagtaccagagactcagggactactccgtggccatcatccgg 130 |||||| | || ||||| ||||| || |||| ||||| || || | ||||||||| || Sbjct: 1152 cagactttgacagataaagagtatcaacgacttagggattattcgattgccatcatcagg 1211 Query: 131 gagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccctgcagacggg 190 || || || || ||||| |||||||| |||||||||||||| || || || | || || Sbjct: 1212 gaaatcggagttgagtgtggtggttctaatgtacagtttgctgtaaatccagttgatggt 1271 Query: 191 gaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctcttgcatcaaag 250 || |||||||| ||||| ||||| || || ||||| ||||| |||||| | || ||||| Sbjct: 1272 gaagtcatggtaattgaaatgaatcctagagtttcgaggtcttcagctttagcctcaaaa 1331 Query: 251 gccactgggtttccgatagccaagatggcagcaaaactctcagtaggctatacgttggac 310 || ||||| ||||| ||||| |||||||| || || || ||||| || || | |||| Sbjct: 1332 gctactggctttccaatagctaagatggctgctaagctatcagtgggatactctctggat 1391 Query: 311 cagattccaaatgatatcacaaagaagacgcctgctagctttgagccctccattgactat 370 |||||||| || ||||||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 1392 cagattcctaacgatatcacaaagaagactccagctagttttgagccatccatagattat 1451 Query: 371 gttgtcacaaagataccgcgatttgcgtttgagaaat 407 || || ||||||||||| ||||||| |||||||||| Sbjct: 1452 gtagttacaaagatacctagatttgcatttgagaaat 1488
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 157 bits (79), Expect = 3e-35 Identities = 298/371 (80%) Strand = Plus / Minus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| |||||||||||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct: 25855 atctgttccattgagaatattgatcctatgggtgtgcacactggtgattccatcactgtg 25796 Query: 62 gcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggcc 121 || ||||| |||||||| || |||| ||||||||| | || ||||| || ||| | || Sbjct: 25795 gcacctgcacagactctaacggatagagagtaccagcggcttagggattattccattgcg 25736 Query: 122 atcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccct 181 || || |||||||||||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 25735 attatacgggagattggtgttgagtgtggtggatctaatgtgcagtttgctgtcaacccg 25676 Query: 182 gcagacggggaggtcatggtgattgagatgaaccccagggtttcaaggtcatcagctctt 241 | || || || || ||| | || ||||||||||| ||||| ||||| || || |||||| Sbjct: 25675 gttgatggtgaagttatgatcatagagatgaaccctagggtctcaagatcttctgctctt 25616 Query: 242 gcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagtaggctat 301 || || ||||| || |||||||| || || || ||||| || || | || || |||||| Sbjct: 25615 gcttccaaggctacagggtttcccattgctaaaatggctgccaagttgtctgttggctat 25556 Query: 302 acgttggaccagattccaaatgatatcacaaagaagacgcctgctagctttgagccctcc 361 || ||||| |||||||| ||||||||||| | ||| || || |||||||| ||||||||| Sbjct: 25555 accttggatcagattcctaatgatatcacgaggaaaacaccggctagcttcgagccctcc 25496 Query: 362 attgactatgt 372 || || ||||| Sbjct: 25495 atcgattatgt 25485
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 97.6 bits (49), Expect = 3e-17 Identities = 181/225 (80%) Strand = Plus / Minus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 ||||||||| ||||| || |||||||||||||| || || || ||||| || |||||||| Sbjct: 1757458 catctgctcgattgaaaacatcgaccccatgggggttcacactggcgactccatcaccgt 1757399 Query: 61 ggcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggc 120 ||| || || ||||| ||||| || |||||||||||| | || | |||||| || | || Sbjct: 1757398 ggccccggcccagaccctcaccgacaaggagtaccagcggctgcgcgactacgccatcgc 1757339 Query: 121 catcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccc 180 |||||| || |||||||| ||||| ||| || ||||| || ||||||||||| ||||| Sbjct: 1757338 catcatgcgcgagattggggtggaaaccgggggatccaacgtgcagtttgccgtcaaccc 1757279 Query: 181 tgcagacggggaggtcatggtgattgagatgaaccccagggtttc 225 || |||| ||||| |||||| ||||||||||| ||||||| Sbjct: 1757278 cgccaacggcgaggtgcgggtgatcgagatgaacccgcgggtttc 1757234
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| ||||| |||| |||||||| || || || |||||||| |||||||| Sbjct: 1391138 catctgctccatcgagaacttcgatcccatgggggtccacacgggcgattccatcaccgt 1391197 Query: 61 ggcgcctgctcagactctcactgataaggagtaccaga 98 || || || ||||| |||||||| ||||||||||||| Sbjct: 1391198 tgccccggcccagaccctcactgacaaggagtaccaga 1391235
>gb|AE006187.1| Pasteurella multocida subsp. multocida str. Pm70 section 154 of 204 of the complete genome Length = 11656 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 349 ctttgagccctccattgactatgttgtcacaaagataccgcgatttgcgtttgagaaat 407 ||||||||| || ||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 4081 ctttgagccttctattgactatgttgtcactaaagtaccgcgttttgcgtttgagaaat 4139
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| ||||| || ||||||||||| |||||| | || ||||||||||| |||||||| Sbjct: 2351982 atctgttccatcgaaaatatcgacccgatgggtatccacacaggcgattctatcaccgtc 2351923 Query: 62 gcgcctgctcagactctcactgataaggagtacca 96 || || || || |||||||| |||||||| ||||| Sbjct: 2351922 gcccccgcccaaactctcaccgataaggaatacca 2351888
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||| ||||| ||||| ||||||||||||| || ||||| ||||| || |||||||| Sbjct: 1989395 catctgttccatcgagaacttcgaccccatgggggtccataccggcgactccatcaccgt 1989454 Query: 61 ggcgcctgctcagactctcactgataaggagtaccaga 98 ||| || || ||||| ||||| || |||||||| |||| Sbjct: 1989455 ggccccggcccagaccctcaccgacaaggagtatcaga 1989492
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 23 gaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcact 82 ||||||||||| |||||||| ||||| || |||||||| ||||| || ||||| || || Sbjct: 820681 gaccccatgggcgtgcataccggcgactcgatcaccgtcgcgccggcgcagaccctgacc 820740 Query: 83 gataaggagtaccaga 98 || ||||||||||||| Sbjct: 820741 gacaaggagtaccaga 820756 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 248 aaggccactgggtttccgatagccaagatggcagcaaa 285 ||||||||||| || ||||| |||||| |||||||||| Sbjct: 820906 aaggccactggtttcccgattgccaaggtggcagcaaa 820943
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 63.9 bits (32), Expect = 4e-07 Identities = 170/216 (78%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| || || || ||||| ||||| ||||| || ||||| || |||||||| Sbjct: 223598 catctgctccatagaaaacatggacccgatgggggtgcacaccggcgactccatcaccgt 223657 Query: 61 ggcgcctgctcagactctcactgataaggagtaccagagactcagggactactccgtggc 120 ||| || || || || ||||| || || || |||||| | || |||||||| || | || Sbjct: 223658 ggccccggcccaaaccctcaccgacaaagaataccagcggctgcgggactacgccatcgc 223717 Query: 121 catcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaaccc 180 |||||| || || ||||| || ||| ||| || ||||| || || |||||||| ||||| Sbjct: 223718 catcatgcgcgaaattggcgtagagaccgggggatccaacgtgcaatttgccgtcaaccc 223777 Query: 181 tgcagacggggaggtcatggtgattgagatgaaccc 216 ||| |||| ||||| |||||| ||||||||||| Sbjct: 223778 tgccaacggcgaggtgcgggtgatcgagatgaaccc 223813
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 5 tgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcg 64 |||||||| || || ||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 320549 tgctccatcgaaaacatcgatcccatgggtgtgcacaccggcgactccatcaccgtggca 320608 Query: 65 cctgctcagac 75 ||||| ||||| Sbjct: 320609 cctgcccagac 320619
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| ||||| ||||||||||||| ||||| || ||||| || |||||||| Sbjct: 202405 catctgctccatcgagaacttcgaccccatgggcgtgcacacgggcgactccatcaccgt 202346 Query: 61 ggc 63 ||| Sbjct: 202345 ggc 202343
>gb|AC168047.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940115D9, complete sequence Length = 108001 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| ||||| | ||||||||||| ||||| || ||||| || |||||||| Sbjct: 51337 catctgctccatcgagaacctggaccccatgggcgtgcacaccggcgactcgatcaccgt 51396 Query: 61 ggcgcctgctcagactctcactgataaggagtaccaga 98 ||| || || ||||| || || || ||||| ||||||| Sbjct: 51397 ggcacccgcgcagacgctgaccgacaaggaataccaga 51434
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 60.0 bits (30), Expect = 6e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||||||||| || || || || |||||||||||||| || ||||| || | Sbjct: 4986208 tcgacccgatgggtgtgcacaccggtgactcgatcaccgtggcgccggcacagaccctga 4986149 Query: 81 ctgataaggagtaccaga 98 | || ||||||||||||| Sbjct: 4986148 ccgacaaggagtaccaga 4986131
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 29 atgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcactgataag 88 ||||| |||||||| || ||||| || ||||||||||||||||| || || || |||||| Sbjct: 2926241 atgggcgtgcatacgggggattccattaccgtggcgcctgctcaaacccttacggataag 2926182 Query: 89 gagtaccag 97 || |||||| Sbjct: 2926181 gaataccag 2926173
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||| ||||| || ||||| || |||||||||||||| || ||||| |||| Sbjct: 2155747 tcgacccgatgggcgtgcacaccggcgactcgatcaccgtggcgccggcgcagacgctca 2155806 Query: 81 ctgataaggagtaccag 97 | || ||||| |||||| Sbjct: 2155807 ccgacaaggaataccag 2155823
>gb|AE011819.1| Xanthomonas axonopodis pv. citri str. 306, section 197 of 469 of the complete genome Length = 11660 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||||||||| || ||||| || |||||||| ||||| || ||||| |||| Sbjct: 5801 tcgacccgatgggtgtgcacaccggcgactcgatcaccgttgcgccggcgcagacgctca 5860 Query: 81 ctgataaggagtaccag 97 | || ||||| |||||| Sbjct: 5861 ccgacaaggaataccag 5877
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 ||||||| || ||||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 3329439 tctgctcgatcgagaatatcgatccgatgggcgttcataccggcgattcgatcaccgtgg 3329498 Query: 63 c 63 | Sbjct: 3329499 c 3329499
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 164 cagtttgccgtgaaccctgcagacggggaggtcatggtgattgagatgaaccc 216 |||||||| |||||||||||| |||| ||| | || ||||||||||||||||| Sbjct: 1957331 cagtttgcggtgaaccctgcaaacggcgagatgattgtgattgagatgaaccc 1957383 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcga 48 ||||||||| ||||| || ||||||| ||||| |||||||||||||| Sbjct: 1957168 catctgctcgattgaaaacttcgacccgatgggcgtgcatacaggcga 1957215
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 ||||||||| || ||||| ||||||| ||||| ||||| || ||||| || ||||| || Sbjct: 1984710 catctgctcgatcgagaacttcgacccgatgggcgtgcacaccggcgactccatcacggt 1984651 Query: 61 ggcgcctgctcagactctcactgataaggagtaccag 97 ||||| || ||||| ||||| || |||||||||||| Sbjct: 1984650 cgcgccggcccagacgctcaccgacaaggagtaccag 1984614
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 23 gaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcact 82 ||||| ||||| ||||| || |||||||| |||||||||||||| || ||||| || || Sbjct: 154032 gacccgatgggcgtgcacaccggcgattcgatcaccgtggcgccggcccagacgctgacc 154091 Query: 83 gataaggagtaccaga 98 || ||||| ||||||| Sbjct: 154092 gacaaggaataccaga 154107
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 23 gaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcact 82 ||||| ||||| ||||| || |||||||| |||||||||||||| || ||||| || || Sbjct: 266477 gacccgatgggcgtgcacaccggcgattcgatcaccgtggcgccggcccagacgctgacc 266536 Query: 83 gataaggagtaccaga 98 || ||||| ||||||| Sbjct: 266537 gacaaggaataccaga 266552
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 23 gaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcact 82 ||||| ||||| ||||| || |||||||| |||||||||||||| || ||||| || || Sbjct: 141306 gacccgatgggcgtgcacaccggcgattcgatcaccgtggcgccggcccagacgctgacc 141365 Query: 83 gataaggagtaccaga 98 || ||||| ||||||| Sbjct: 141366 gacaaggaataccaga 141381
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 |||||||||| ||||| ||||||||||||| ||||| || ||||| || |||||||| | Sbjct: 44703 tctgctccatcgagaacttcgaccccatgggcgtgcacaccggcgactcgatcaccgtcg 44644 Query: 63 cgcc 66 |||| Sbjct: 44643 cgcc 44640
>gb|AE004889.1| Pseudomonas aeruginosa PAO1, section 450 of 529 of the complete genome Length = 11415 Score = 56.0 bits (28), Expect = 9e-05 Identities = 79/96 (82%) Strand = Plus / Minus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 |||||||||| ||||| ||||||| ||||| ||||| || || || || |||||||||| Sbjct: 4624 tctgctccatcgagaacttcgacccgatgggcgtgcacaccggtgactcgatcaccgtgg 4565 Query: 63 cgcctgctcagactctcactgataaggagtaccaga 98 |||| || ||||| || || || ||||| ||||||| Sbjct: 4564 cgccggcgcagaccctgaccgacaaggaataccaga 4529
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 56.0 bits (28), Expect = 9e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 |||||||| || ||||| ||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 3070884 atctgctcgatcgagaacctcgaccccatgggcgtgcacacgggcgaatccatcacggtg 3070943 Query: 62 gcgcctgctcagactctcac 81 ||||| || ||||| ||||| Sbjct: 3070944 gcgccggcccagaccctcac 3070963
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| || || |||||||| |||||||||||||| || || || |||||||| Sbjct: 341610 catctgctccatcgaaaacatcgacccgatgggtgtgcataccggtgactccatcaccgt 341669
>gb|U81259.1|PAU81259 Pseudomonas aeruginosa dihydrodipicolinate reductase (dapB) gene, partial cds, carbamoylphosphate synthetase small subunit (carA) and carbamoylphosphate synthetase large subunit (carB) genes, complete cds, and FtsJ homolog (ftsJ) gene, partial cds Length = 7285 Score = 56.0 bits (28), Expect = 9e-05 Identities = 79/96 (82%) Strand = Plus / Plus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 |||||||||| ||||| ||||||| ||||| ||||| || || || || |||||||||| Sbjct: 3097 tctgctccatcgagaacttcgacccgatgggcgtgcacaccggtgactcgatcaccgtgg 3156 Query: 63 cgcctgctcagactctcactgataaggagtaccaga 98 |||| || ||||| || || || ||||| ||||||| Sbjct: 3157 cgccggcgcagaccctgaccgacaaggaataccaga 3192
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 218 agggtttcaaggtcatcagctcttgcatcaaaggc 252 |||||||||||||||||||| |||||||| ||||| Sbjct: 3002252 agggtttcaaggtcatcagcccttgcatccaaggc 3002218 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 17 aatatcgaccccatgggtgtgcatacagg 45 ||||| ||||||||||| ||||||||||| Sbjct: 3002444 aatattgaccccatgggcgtgcatacagg 3002416
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtg 61 ||||| ||||| || ||||||||||| |||||| | || || ||||||||||| ||||| Sbjct: 4603950 atctgttccatcgaaaatatcgacccgatgggtatccacaccggcgattcaattaccgtc 4604009 Query: 62 gcgcctgctcagactctcactgataaggagtacca 96 || || || || || ||||| |||||||| ||||| Sbjct: 4604010 gcccccgcccaaaccctcaccgataaggaatacca 4604044
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 320 aatgatatcacaaagaagacgcctgctagctttgagccctccattgactatgttgtcaca 379 ||||| ||||| ||| ||||||||| ||||| ||||| |||| |||||||| ||||| Sbjct: 979886 aatgacatcaccaaggtgacgcctgccagcttcgagccgaccatcgactatgtcgtcacc 979827 Query: 380 aagataccgcgatttgcgtttgagaa 405 ||||| ||| ||| ||||||||||| Sbjct: 979826 aagatcccgaaattcgcgtttgagaa 979801
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 52.0 bits (26), Expect = 0.001 Identities = 110/138 (79%) Strand = Plus / Plus Query: 7 ctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcc 66 |||||| ||||| ||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 2176791 ctccatcgagaacttcgaccccatgggcgtgcataccggggattccatcacggtggcccc 2176850 Query: 67 tgctcagactctcactgataaggagtaccagagactcagggactactccgtggccatcat 126 || || || |||| || |||||||||| | || | ||||||||| | |||||||| Sbjct: 2176851 cgcacaaacgctcagcgacgtggagtaccagcgcctgcgtgactactccctcgccatcat 2176910 Query: 127 ccgggagattggtgtgga 144 ||| ||||| || ||||| Sbjct: 2176911 ccgcgagatcggcgtgga 2176928
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||| ||||| || ||||| || |||||||||||||| || ||||| || | Sbjct: 4100929 tcgacccgatgggcgtgcacaccggcgactccatcaccgtggcgccggcgcagacgctga 4100870 Query: 81 ctgataaggagtaccaga 98 | || ||||| ||||||| Sbjct: 4100869 ccgacaaggaataccaga 4100852
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 31083 cggtggttccaatgtccagtttgcggtgaaccc 31115
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||||||||| |||||||| || ||||| ||||| ||||| || || ||||| |||| Sbjct: 1657485 tcgaccccatgggggtgcatacgggggattcgatcacggtggctcccgcccagaccctca 1657544 Query: 81 c 81 | Sbjct: 1657545 c 1657545
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 ||||| ||||||| || ||||||| ||||| ||||| ||||| ||||||||||| |||| Sbjct: 1134037 tctgcgccattgaaaacttcgaccctatgggcgtgcacacaggtgattcaatcacagtgg 1134096 Query: 63 c 63 | Sbjct: 1134097 c 1134097
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 119 gccatcatccgggagattggtgtggagtgcggtggttccaatgtacagtttgccgtgaac 178 ||||||||||| ||||| || || || ||||||||||||||| |||||||| ||||| Sbjct: 3495049 gccatcatccgcgagatcggcgttgaaaccggtggttccaatgtccagtttgcggtgaat 3495108 Query: 179 cctgc 183 ||||| Sbjct: 3495109 cctgc 3495113 Score = 46.1 bits (23), Expect = 0.088 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 ||||||||||||||| || ||||| ||||||| || ||||| || || || |||||||| Sbjct: 3494931 catctgctccattgaaaacatcgatgccatgggcgtccataccggtgactccatcaccgt 3494990 Query: 61 ggc 63 ||| Sbjct: 3494991 ggc 3494993
>emb|BX572097.1| Prochlorococcus marinus MIT9313 complete genome; segment 3/7 Length = 349823 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 29 atgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcac 81 |||||||| |||||||| ||||||||||| || || ||||| || |||||||| Sbjct: 202843 atgggtgttcatacaggagattcaatcactgttgctcctgcgcaaactctcac 202791 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 362 attgactatgttgtcacaaagataccgcgatttgcgtttgagaa 405 ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 202510 attgattatgttgtcacgaagattccacgatttgcatttgagaa 202467
>emb|BX321861.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 6/10 Length = 298050 Score = 50.1 bits (25), Expect = 0.006 Identities = 64/77 (83%) Strand = Plus / Minus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||||||||| || ||||| || ||||| || || || |||||||| ||||| || | Sbjct: 257013 tcgaccccatgggagttcatacgggagattcgattacggttgcgcctgcccagacgctga 256954 Query: 81 ctgataaggagtaccag 97 | || |||||||||||| Sbjct: 256953 cggacaaggagtaccag 256937
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 164 cagtttgccgtgaaccctgcagacggggaggtcatggtgattgagatgaaccc 216 |||||||| |||||||||| | |||| ||| | || ||||||||||||||||| Sbjct: 236272 cagtttgcggtgaaccctgaaaacggcgagatgattgtgattgagatgaaccc 236220
>gb|AF299295.1|AF299295 Zymomonas mobilis ZM4 fosmid clone 43E12-I, complete sequence Length = 18366 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 17 aatatcgaccccatgggtgtgcatacaggcgattcaatcac 57 ||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 4072 aatatcgacccgatgggggttcataccggcgattcaatcac 4032
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 30569 cggtggttccaatgtccagtttgcggtgaaccc 30601
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 218 agggtttcaaggtcatcagctcttgcatcaaaggccactgggtttccgatagccaagatg 277 ||||||||||| || |||||| | || |||||||| ||||| | ||| ||||||||| || Sbjct: 2947013 agggtttcaagatcttcagctttagcttcaaaggcaactggttatccaatagccaaggtg 2946954 Query: 278 gcagc 282 ||||| Sbjct: 2946953 gcagc 2946949
>gb|AF086791.1|AF086791 Zymomonas mobilis strain ZM4 clone 67E10 carbamoylphosphate synthetase small subunit (carA), carbamoylphosphate synthetase large subunit (carB), transcription elongation factor (greA), enolase (eno), pyruvate dehydrogenase alpha subunit (pdhA), pyruvate dehydrogenase beta subunit (pdhB), ribonuclease H (rnh), homoserine kinase homolog, alcohol dehydrogenase II (adhB), and excinuclease ABC subunit A (uvrA) genes, complete cds; and unknown genes Length = 37867 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 17 aatatcgaccccatgggtgtgcatacaggcgattcaatcac 57 ||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 3258 aatatcgacccgatgggggttcataccggcgattcaatcac 3298
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 36028 cggtggttccaatgtccagtttgcggtgaaccc 36060
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 17 aatatcgaccccatgggtgtgcatacaggcgattcaatcac 57 ||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 1657640 aatatcgacccgatgggggttcataccggcgattcaatcac 1657600
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 36027 cggtggttccaatgtccagtttgcggtgaaccc 36059
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 50407 cggtggttccaatgtccagtttgcggtgaaccc 50439
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 31688 cggtggttccaatgtccagtttgcggtgaaccc 31720
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 ||||||||||||||| |||||||| |||||||| Sbjct: 38819 cggtggttccaatgtccagtttgcggtgaaccc 38851
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 48.1 bits (24), Expect = 0.022 Identities = 78/96 (81%) Strand = Plus / Plus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 |||||||||| ||||| ||||||| ||||| ||||| || || || || |||||||||| Sbjct: 960912 tctgctccatcgagaacttcgacccgatgggcgtgcacaccggtgactccatcaccgtgg 960971 Query: 63 cgcctgctcagactctcactgataaggagtaccaga 98 | || || ||||| || || || ||||| ||||||| Sbjct: 960972 ctccggcacagaccctgaccgacaaggaataccaga 961007
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| ||||| |||| |||||||| |||||||| || || || |||||||| Sbjct: 758166 catctgctccatcgagaacgtcgatcccatgggcgtgcataccggtgactccatcaccgt 758225
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 46.1 bits (23), Expect = 0.088 Identities = 80/99 (80%) Strand = Plus / Minus Query: 11 attgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgct 70 ||||||||| | ||||| |||||||| || || || ||||| || || || || || || Sbjct: 911019 attgagaatttagacccaatgggtgtccacactggagattccattactgtagctcccgca 910960 Query: 71 cagactctcactgataaggagtaccagagactcagggac 109 |||||| | || |||||||||||||||||| | |||||| Sbjct: 910959 cagactttaacagataaggagtaccagagattgagggac 910921
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.088 Identities = 47/55 (85%) Strand = Plus / Plus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcac 57 |||||||||| ||||| ||||||||||||| ||||| || ||||| || ||||| Sbjct: 1235460 tctgctccatcgagaacctcgaccccatgggcgtgcacaccggcgactccatcac 1235514
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 46.1 bits (23), Expect = 0.088 Identities = 62/75 (82%) Strand = Plus / Minus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| || || |||| ||||||| || ||||| ||||| || |||||||| Sbjct: 1885275 catctgctccatcgaaaacttcgatgccatgggcgttcataccggcgactccatcaccgt 1885216 Query: 61 ggcgcctgctcagac 75 |||||| || ||||| Sbjct: 1885215 ggcgccggcgcagac 1885201
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 46.1 bits (23), Expect = 0.088 Identities = 104/131 (79%) Strand = Plus / Minus Query: 239 cttgcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagtaggc 298 ||||| || ||||| ||||| || ||||| |||||| | || || || ||| | |||||| Sbjct: 1583169 cttgcctcgaaggcgactggcttcccgattgccaaggtagctgccaagctcgcggtaggc 1583110 Query: 299 tatacgttggaccagattccaaatgatatcacaaagaagacgcctgctagctttgagccc 358 |||||| | ||| ||||| | || || ||||| |||| |||||| || ||||| ||||| Sbjct: 1583109 tatacgctcgacgagattaccaacgacatcaccaagacgacgcccgcaagcttcgagcct 1583050 Query: 359 tccattgacta 369 || |||||||| Sbjct: 1583049 tcgattgacta 1583039
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 46.1 bits (23), Expect = 0.088 Identities = 56/67 (83%) Strand = Plus / Minus Query: 3 tctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtgg 62 ||||||| |||||||| | || || ||||| || ||||| ||||||||||||||||| | Sbjct: 174628 tctgctcaattgagaactttgatccaatgggcgtacataccggcgattcaatcaccgttg 174569 Query: 63 cgcctgc 69 | ||||| Sbjct: 174568 cacctgc 174562
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 212 aaccccagggtttcaaggtcatcagctcttgcatc 246 |||||||||||||| ||||| ||||| |||||||| Sbjct: 48499 aaccccagggtttccaggtcttcagcccttgcatc 48465
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 attgactatgttgtcacaaagatacc 387 |||||||||||||| ||||||||||| Sbjct: 1539102 attgactatgttgttacaaagatacc 1539127
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 44.1 bits (22), Expect = 0.35 Identities = 46/54 (85%) Strand = Plus / Minus Query: 23 gaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagact 76 ||||| ||||||||||| |||||||| || ||||| || || ||||| |||||| Sbjct: 982992 gacccaatgggtgtgcacacaggcgactctatcacggttgcccctgcgcagact 982939
>emb|AJ431666.1|HEU431666 Halomonas eurihalina dapB gene (partial), carA gene and carB gene, strain F2-7 Length = 4965 Score = 44.1 bits (22), Expect = 0.35 Identities = 64/78 (82%) Strand = Plus / Plus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 |||| |||||||| ||||| || || ||||| ||||||||||| || || ||||| || | Sbjct: 2444 tcgatcccatgggcgtgcacaccggggattccatcaccgtggcacccgcccagacgctga 2503 Query: 81 ctgataaggagtaccaga 98 | || ||||| ||||||| Sbjct: 2504 cggacaaggaataccaga 2521
>gb|AE012286.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 194 of 460 of the complete genome Length = 11290 Score = 44.1 bits (22), Expect = 0.35 Identities = 58/70 (82%) Strand = Plus / Plus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||| ||||| || || || || |||||||||||||| || ||||| |||| Sbjct: 5551 tcgacccgatgggcgtgcacaccggtgactcgatcaccgtggcgccggcgcagacgctca 5610 Query: 81 ctgataagga 90 | || ||||| Sbjct: 5611 ccgacaagga 5620
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.35 Identities = 58/70 (82%) Strand = Plus / Minus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||| ||||| || || || || |||||||||||||| || ||||| |||| Sbjct: 2838211 tcgacccgatgggcgtgcacaccggtgactcgatcaccgtggcgccggcgcagacgctca 2838152 Query: 81 ctgataagga 90 | || ||||| Sbjct: 2838151 ccgacaagga 2838142
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 tcatcagctcttgcatcaaaggccactgg 258 |||||||| ||||| |||||||||||||| Sbjct: 494705 tcatcagcccttgcctcaaaggccactgg 494733
>gb|J01597.1|ECOCARAB Escherichia coli carbamoyl-phosphate synthetase subunit A (carA) and carbamoyl-phosphate synthetase subunit B (carB) genes, complete cds Length = 5227 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 |||||||||||| || |||||||| |||||||| Sbjct: 2476 cggtggttccaacgttcagtttgcggtgaaccc 2508
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 |||||||||||| || |||||||| |||||||| Sbjct: 33545 cggtggttccaacgtccagtttgcggtgaaccc 33577
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.4 Identities = 60/73 (82%) Strand = Plus / Minus Query: 26 cccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcactgat 85 |||||||||||||| || ||||| || ||||| || ||||| || ||||| || || || Sbjct: 2819488 cccatgggtgtgcacaccggcgactccatcacagtcgcgccagcccagacgctgaccgac 2819429 Query: 86 aaggagtaccaga 98 ||||| ||||||| Sbjct: 2819428 aaggaataccaga 2819416
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 |||||||||||| || |||||||| |||||||| Sbjct: 31653 cggtggttccaacgttcagtttgcggtgaaccc 31685
>emb|AL136532.22| Human DNA sequence from clone RP11-379F14 on chromosome 20 Contains the MRPS16P gene for mitochondrial ribosomal protein S16 pseudogene, complete sequence Length = 94387 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 agatgaaccccagggtttcaa 227 ||||||||||||||||||||| Sbjct: 3373 agatgaaccccagggtttcaa 3353
>gb|AY834753.1| Cystobacter fuscus cystothiazole A gene cluster, complete sequence Length = 63876 Score = 42.1 bits (21), Expect = 1.4 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgt 60 |||||||||||| ||||| | || || ||||| ||||| || ||||| || ||||| || Sbjct: 11549 catctgctccatcgagaacctggatccgatgggcgtgcacacgggcgactccatcacggt 11608 Query: 61 ggcgcctgctcagactctcac 81 |||||| || ||||| ||||| Sbjct: 11609 ggcgccggcgcagacgctcac 11629
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 |||||||||||| || |||||||| |||||||| Sbjct: 31653 cggtggttccaacgttcagtttgcggtgaaccc 31685
>gb|AC010102.3|AC010102 Homo sapiens BAC clone RP11-486B15 from 2, complete sequence Length = 230827 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 agatgaaccccagggtttcaa 227 ||||||||||||||||||||| Sbjct: 142509 agatgaaccccagggtttcaa 142489
>emb|V01500.1|ECCARB E. coli gene carB encoding carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5). Map position is 1 minute Length = 3674 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 148 cggtggttccaatgtacagtttgccgtgaaccc 180 |||||||||||| || |||||||| |||||||| Sbjct: 923 cggtggttccaacgttcagtttgcggtgaaccc 955
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 agattggtgtggagtgcggtg 152 ||||||||||||||||||||| Sbjct: 146087 agattggtgtggagtgcggtg 146107
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 26 cccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctcactgat 85 ||||||||| | ||||| || ||||| || ||||||||||| ||||| ||| | || ||| Sbjct: 153697 cccatgggtattcatactggtgattccattaccgtggcgccagctcaaactttgaccgat 153756 Query: 86 aagga 90 ||||| Sbjct: 153757 aagga 153761
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcac 57 ||||||| |||||||||||||| ||||| || ||||| Sbjct: 1183655 tcgacccaatgggtgtgcatactggcgactctatcac 1183691
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 164 cagtttgccgtgaaccctgcagacggggaggtcatggtgattgagatgaaccc 216 |||||||| |||||||||| | |||| ||| | || ||||| ||||||||||| Sbjct: 46578 cagtttgcggtgaaccctgaaaacggcgagatgattgtgatcgagatgaaccc 46526
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 5 tgctccattgagaatatcgaccccatgggtgtgcatacaggcgat 49 |||| |||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 976731 tgctgcattgaaaatattgaccccatgggcgttcataccggcgat 976687
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 tcatcagctcttgcatcaaaggccactgg 258 |||||||| ||||| |||||||||||||| Sbjct: 499517 tcatcagcccttgcctcaaaggccactgg 499545
>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete sequence Length = 208029 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ttgagatgaaccccagggtt 223 |||||||||||||||||||| Sbjct: 71825 ttgagatgaaccccagggtt 71844
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 23 gaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcc 66 ||||| ||||| || ||||| ||||| || |||||||||||||| Sbjct: 2561250 gacccgatgggcgtccataccggcgactcgatcaccgtggcgcc 2561293
>gb|AE009168.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 194 of 256 of the complete sequence Length = 10875 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcga 48 |||||||||||| || || |||||||| ||||| ||||| || ||||| Sbjct: 6545 catctgctccatcgaaaacatcgacccgatgggcgtgcacaccggcga 6592
>emb|AJ012388.1|LLA012388 Lactococcus lactis dar gene and genes encoding five hypothetical proteins Length = 5469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 attccaaatgatatcacaaa 333 |||||||||||||||||||| Sbjct: 2237 attccaaatgatatcacaaa 2256
>ref|XM_785630.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8211-PA (LOC585820), partial mRNA Length = 417 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 atggcagcaaaactctcagt 294 |||||||||||||||||||| Sbjct: 109 atggcagcaaaactctcagt 90
>emb|Y11467.1|TT11467 T.thermophilus yqhj gene partial, ORF1, carB gene, yaaq gene and ORF2 partial Length = 5836 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 ggccatcatccgggagattggtgtggag 145 |||||||||||||||||| || |||||| Sbjct: 2473 ggccatcatccgggagatcggggtggag 2500
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 5.4 Identities = 50/60 (83%) Strand = Plus / Minus Query: 10 cattgagaatatcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgc 69 |||||| ||| |||| |||||||| | || || || |||||||||||||| |||||||| Sbjct: 1232852 cattgaaaatttcgatcccatgggcattcacacgggtgattcaatcaccgtagcgcctgc 1232793
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 1 catctgctccattgagaatatcgaccccatgggtgtgcatacaggcga 48 |||||||||||| || || |||||||| ||||| ||||| || ||||| Sbjct: 2151317 catctgctccatcgaaaacatcgacccgatgggcgtgcacaccggcga 2151364
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 ggccatcatccgggagattggtgtggag 145 |||||||||||||||||| || |||||| Sbjct: 581520 ggccatcatccgggagatcggggtggag 581493
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 2 atctgctccattgagaatatcgaccccatggg 33 |||||||||||||| || || ||||||||||| Sbjct: 2427964 atctgctccattgaaaacattgaccccatggg 2427933
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 40.1 bits (20), Expect = 5.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 236 gctcttgcatcaaaggccactgggtttccgatagccaagatggcagcaaaactctcagta 295 |||||||| ||||| || || || ||||| || ||||| || ||||||||||| ||||| Sbjct: 1173733 gctcttgcttcaaaagcaacaggttttcctattgccaaaattgcagcaaaacttgcagta 1173674 Query: 296 ggctatac 303 || ||||| Sbjct: 1173673 ggttatac 1173666
>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 187696 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ttgagatgaaccccagggtt 223 |||||||||||||||||||| Sbjct: 54554 ttgagatgaaccccagggtt 54535
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 3 tctgctccattgagaatatcgaccccatgggt 34 ||||||| |||||||||||||| || |||||| Sbjct: 30027 tctgctcaattgagaatatcgatccaatgggt 29996
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tctgctccattgagaatatcgaccccatgggt 34 ||||||| |||||||||||||| || |||||| Sbjct: 1730954 tctgctcaattgagaatatcgatccaatgggt 1730985
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 atctgctccattgagaatatcgaccccatggg 33 ||||||||||| ||||| ||||||||||||| Sbjct: 1135570 atctgctccatcgagaacttcgaccccatggg 1135601
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.4 Identities = 50/60 (83%) Strand = Plus / Minus Query: 21 tcgaccccatgggtgtgcatacaggcgattcaatcaccgtggcgcctgctcagactctca 80 ||||||| ||||| ||||| || ||||| || ||||||||||| || || ||||| |||| Sbjct: 679119 tcgacccgatgggcgtgcacacgggcgactccatcaccgtggcccccgcgcagacgctca 679060
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 ggccatcatccgggagattggtgtggag 145 |||||||||||||||||| || |||||| Sbjct: 235503 ggccatcatccgggagatcggggtggag 235476
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggaggtcatggtgattgaga 209 |||||||||||||||||||| Sbjct: 138008 ggaggtcatggtgattgaga 137989 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,897,362 Number of Sequences: 3902068 Number of extensions: 2897362 Number of successful extensions: 58066 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57312 Number of HSP's gapped (non-prelim): 743 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
