ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187173.1| Oryza sativa (japonica cultivar-group), mRNA 74 4e-10
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
3dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
4ref|XM_483727.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.099
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.099
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.099
7dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.099
8dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.099
9ref|XM_482928.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
10emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 44 0.39
11gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, comple... 44 0.39
12gb|AC137550.1| Homo sapiens chromosome 5 clone RP11-464K22, comp... 44 0.39
13dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
14dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
15ref|XM_465607.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
16ref|NM_197112.1| Oryza sativa (japonica cultivar-group) unknown ... 42 1.6
17gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
18ref|XM_424789.1| PREDICTED: Gallus gallus similar to Rho-guanine... 42 1.6
19gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
20gb|BC012039.1| Mus musculus splicing factor, arginine/serine-ric... 42 1.6
21gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
22ref|NM_026499.2| Mus musculus splicing factor, arginine/serine-r... 42 1.6
23gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequ... 42 1.6
25emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
26gb|AC092211.7| Oryza sativa chromosome 10 P0031G09 genomic sequ... 42 1.6
27gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, compl... 42 1.6
28gb|AY033944.1| Myxococcus xanthus probable regulatory protein ge... 42 1.6
29gb|AE011783.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.6
30dbj|AK146293.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-... 42 1.6
31dbj|AK133872.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 42 1.6
32gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.6
33dbj|AK159519.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 42 1.6
34dbj|AK171709.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.6
35dbj|AK004831.1| Mus musculus adult male lung cDNA, RIKEN full-le... 42 1.6
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
41dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.6
42dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
43gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
44gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
45emb|AL590418.16| Mouse DNA sequence from clone RP23-206I14 on ch... 42 1.6
46ref|XM_472176.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
47gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
48gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosom... 40 6.1
49gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
50ref|XM_420351.1| PREDICTED: Gallus gallus similar to ring finger... 40 6.1
51gb|BC026213.1| Homo sapiens F-box and WD-40 domain protein 11, t... 40 6.1
52gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.1
53gb|AE007269.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 6.1
54ref|NM_012300.2| Homo sapiens F-box and WD-40 domain protein 11 ... 40 6.1
55ref|NM_033645.2| Homo sapiens F-box and WD-40 domain protein 11 ... 40 6.1
56ref|NM_033644.2| Homo sapiens F-box and WD-40 domain protein 11 ... 40 6.1
57gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome... 40 6.1
58emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.1
59ref|XM_762134.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 6.1
60gb|AY330485.1| Saccharopolyspora erythraea amino acid permease g... 40 6.1
61ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal mus... 40 6.1
62gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.1
63emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.1
64gb|AC011387.5| Homo sapiens chromosome 5 clone CTB-168B7, comple... 40 6.1
65gb|AY044272.1| Pseudomonas sp. B13 3-oxoadipate:succinyl-CoA tra... 40 6.1
66gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, comp... 40 6.1
67gb|AC011410.6|AC011410 Homo sapiens chromosome 5 clone CTB-78H18... 40 6.1
68gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.1
69dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
70dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
71dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
72dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
73gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the... 40 6.1
74gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 6.1
75dbj|AK066733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
76gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.1
77gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
78emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
79emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005... 40 6.1
80emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1
81gb|AC164564.3| Mus musculus BAC clone RP23-96N11 from chromosome... 40 6.1
82dbj|AB014596.1| Homo sapiens mRNA for KIAA0696 protein, partial cds 40 6.1 
>ref|NM_187173.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2688

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 375 gcgaggggttccagtgcaggtgtgcgcttgttctctccgcggcggtggccgcgctgctcg 434
           ||||||||||| |||||||||| ||  | ||||| || ||||||||||||||| | ||||
Sbjct: 323 gcgaggggttcgagtgcaggtgcgccgtcgttctgtcggcggcggtggccgcgattctcg 382

                                
Query: 435 cattcacgcagcaaaacgtga 455
           | ||||||||||| |||||||
Sbjct: 383 cgttcacgcagcagaacgtga 403



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 79  ccccaccttcctccgtgcgaccgagctccgcctcctccgctgcaccctcccttccccgat 138
           ||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||||  
Sbjct: 27  ccccaccttcctccgcgaggtcgagctccgcctcctccgctgcacgctcccctccccggc 86

                                                                       
Query: 139 ctcccaaccagctcccccctcacctcccccagaacacccgctcggtcctgtcgtgtcctc 198
           | |||  ||  | || ||||| ||||||||    ||||||||||  || ||||   ||||
Sbjct: 87  caccctgcctcccccgccctcgcctccccctcgccacccgctcgccccggtcgccgcctc 146

                                                                
Query: 199 tgccgtcgccgccgtcgaggtcggggactacgtggctgctatcgcctccgccg 251
            ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 147 cgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 199
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                            
Query: 79       ccccaccttcctccgtgcgaccgagctccgcctcctccgctgcaccctcccttccccgat 138
                ||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||||  
Sbjct: 15733752 ccccaccttcctccgcgaggtcgagctccgcctcctccgctgcacgctcccctccccggc 15733693

                                                                            
Query: 139      ctcccaaccagctcccccctcacctcccccagaacacccgctcggtcctgtcgtgtcctc 198
                | |||  ||  | || ||||| ||||||||    ||||||||||  || ||||   ||||
Sbjct: 15733692 caccctgcctcccccgccctcgcctccccctcgccacccgctcgccccggtcgccgcctc 15733633

                                                                     
Query: 199      tgccgtcgccgccgtcgaggtcggggactacgtggctgctatcgcctccgccg 251
                 ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 15733632 cgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 15733580



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 375      gcgaggggttccagtgcaggtgtgcgcttgttctctccgcggcggtggccgcgctgctcg 434
                ||||||||||| |||||||||| ||  | ||||| || ||||||||||||||| | ||||
Sbjct: 15733456 gcgaggggttcgagtgcaggtgcgccgtcgttctgtcggcggcggtggccgcgattctcg 15733397

                                     
Query: 435      cattcacgcagcaaaacgtga 455
                | ||||||||||| |||||||
Sbjct: 15733396 cgttcacgcagcagaacgtga 15733376
to top
>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0075N02
          Length = 186945

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                          
Query: 79     ccccaccttcctccgtgcgaccgagctccgcctcctccgctgcaccctcccttccccgat 138
              ||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||||  
Sbjct: 131609 ccccaccttcctccgcgaggtcgagctccgcctcctccgctgcacgctcccctccccggc 131550

                                                                          
Query: 139    ctcccaaccagctcccccctcacctcccccagaacacccgctcggtcctgtcgtgtcctc 198
              | |||  ||  | || ||||| ||||||||    ||||||||||  || ||||   ||||
Sbjct: 131549 caccctgcctcccccgccctcgcctccccctcgccacccgctcgccccggtcgccgcctc 131490

                                                                   
Query: 199    tgccgtcgccgccgtcgaggtcggggactacgtggctgctatcgcctccgccg 251
               ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 131489 cgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 131437



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 375    gcgaggggttccagtgcaggtgtgcgcttgttctctccgcggcggtggccgcgctgctcg 434
              ||||||||||| |||||||||| ||  | ||||| || ||||||||||||||| | ||||
Sbjct: 131313 gcgaggggttcgagtgcaggtgcgccgtcgttctgtcggcggcggtggccgcgattctcg 131254

                                   
Query: 435    cattcacgcagcaaaacgtga 455
              | ||||||||||| |||||||
Sbjct: 131253 cgttcacgcagcagaacgtga 131233
to top
>ref|XM_483727.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1851

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 413 gcggcggtggccgcgctgctcgc 435
           |||||||||||||||||||||||
Sbjct: 14  gcggcggtggccgcgctgctcgc 36
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 413      gcggcggtggccgcgctgctcgc 435
                |||||||||||||||||||||||
Sbjct: 27787266 gcggcggtggccgcgctgctcgc 27787288



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 204      tcgccgccgtcgaggtcgggga 225
                ||||||||||||||||||||||
Sbjct: 23410137 tcgccgccgtcgaggtcgggga 23410116
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 412    cgcggcggtggccgcgctgctcg 434
              |||||||||||||||||||||||
Sbjct: 816765 cgcggcggtggccgcgctgctcg 816743



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 407     ctctccgcggcggtggccgcgctg 430
               ||||||||||||| ||||||||||
Sbjct: 1947716 ctctccgcggcggcggccgcgctg 1947693
to top
>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1125_C01
          Length = 123849

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 413    gcggcggtggccgcgctgctcgc 435
              |||||||||||||||||||||||
Sbjct: 120188 gcggcggtggccgcgctgctcgc 120210
to top
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0439B07
          Length = 89475

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 413   gcggcggtggccgcgctgctcgc 435
             |||||||||||||||||||||||
Sbjct: 41723 gcggcggtggccgcgctgctcgc 41745
to top
>ref|XM_482928.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 963

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 204 tcgccgccgtcgaggtcgggga 225
           ||||||||||||||||||||||
Sbjct: 206 tcgccgccgtcgaggtcgggga 185
to top
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 200    gccgtcgccgccgtcgaggtcg 221
              ||||||||||||||||||||||
Sbjct: 262709 gccgtcgccgccgtcgaggtcg 262730
to top
>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence
          Length = 145242

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 112    cctccgctgcaccctcccttcc 133
              ||||||||||||||||||||||
Sbjct: 140679 cctccgctgcaccctcccttcc 140700
to top
>gb|AC137550.1| Homo sapiens chromosome 5 clone RP11-464K22, complete sequence
          Length = 43879

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 112   cctccgctgcaccctcccttcc 133
             ||||||||||||||||||||||
Sbjct: 26013 cctccgctgcaccctcccttcc 26034
to top
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 204   tcgccgccgtcgaggtcgggga 225
             ||||||||||||||||||||||
Sbjct: 91974 tcgccgccgtcgaggtcgggga 91953
to top
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1111_E05
          Length = 126978

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 204  tcgccgccgtcgaggtcgggga 225
            ||||||||||||||||||||||
Sbjct: 1552 tcgccgccgtcgaggtcgggga 1531
to top
>ref|XM_465607.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 387

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 cctcccttccccgatctccca 144
           |||||||||||||||||||||
Sbjct: 51  cctcccttccccgatctccca 71
to top
>ref|NM_197112.1| Oryza sativa (japonica cultivar-group) unknown protein
           (P0031G09.5), mRNA
          Length = 707

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 cctcccttccccgatctccca 144
           |||||||||||||||||||||
Sbjct: 106 cctcccttccccgatctccca 126
to top
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
              complete sequence
          Length = 132017

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    gccgtcgccgccgtcgaggtc 220
              |||||||||||||||||||||
Sbjct: 128750 gccgtcgccgccgtcgaggtc 128770
to top
>ref|XM_424789.1| PREDICTED: Gallus gallus similar to Rho-guanine nucleotide exchange
            factor (LOC427201), partial mRNA
          Length = 4862

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cgctgctcgcattcacgcagc 446
            |||||||||||||||||||||
Sbjct: 4141 cgctgctcgcattcacgcagc 4121
to top
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   gccgtcgccgccgtcgaggtc 220
             |||||||||||||||||||||
Sbjct: 78362 gccgtcgccgccgtcgaggtc 78382
to top
>gb|BC012039.1| Mus musculus splicing factor, arginine/serine-rich 6, mRNA (cDNA
           clone MGC:6276 IMAGE:2648111), complete cds
          Length = 3567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 132 tcctccgggaggctggcggaggggc 108
to top
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 412   cgcggcggtggccgcgctgct 432
             |||||||||||||||||||||
Sbjct: 31581 cgcggcggtggccgcgctgct 31601
to top
>ref|NM_026499.2| Mus musculus splicing factor, arginine/serine-rich 6 (Sfrs6), mRNA
          Length = 3567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 132 tcctccgggaggctggcggaggggc 108
to top
>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 195    cctctgccgtcgccgccgtcg 215
              |||||||||||||||||||||
Sbjct: 134080 cctctgccgtcgccgccgtcg 134060
to top
>gb|AC146481.2| Oryza sativa chromosome 10  B1288B10 genomic sequence, complete
             sequence
          Length = 58734

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   cctcccttccccgatctccca 144
             |||||||||||||||||||||
Sbjct: 37578 cctcccttccccgatctccca 37558
to top
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
              complete sequence
          Length = 164577

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 415    ggcggtggccgcgctgctcgc 435
              |||||||||||||||||||||
Sbjct: 148139 ggcggtggccgcgctgctcgc 148119
to top
>gb|AC092211.7| Oryza sativa chromosome 10  P0031G09 genomic sequence, complete
            sequence
          Length = 17072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 124  cctcccttccccgatctccca 144
            |||||||||||||||||||||
Sbjct: 5686 cctcccttccccgatctccca 5666
to top
>gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, complete sequence
          Length = 142645

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    gcgaccgagctccgcctcctc 115
             |||||||||||||||||||||
Sbjct: 65118 gcgaccgagctccgcctcctc 65138
to top
>gb|AY033944.1| Myxococcus xanthus probable regulatory protein gene, partial cds;
           alcohol dehydrogenase and FapA (fapA) genes, complete
           cds; and unknown genes
          Length = 5590

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 409 ctccgcggcggtggccgcgctgctc 433
           |||||||||||||| ||||||||||
Sbjct: 939 ctccgcggcggtgggcgcgctgctc 963
to top
>gb|AE011783.1| Xanthomonas axonopodis pv. citri str. 306,  section 161 of 469 of the
             complete genome
          Length = 12465

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 325   cactgccgctgccgaggcgtt 345
             |||||||||||||||||||||
Sbjct: 11267 cactgccgctgccgaggcgtt 11247
to top
>dbj|AK146293.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
           library, clone:I730047L24 product:splicing factor,
           arginine/serine-rich 6, full insert sequence
          Length = 3524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 123 tcctccgggaggctggcggaggggc 99
to top
>dbj|AK133872.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730471G08 product:splicing
           factor, arginine/serine-rich 6, full insert sequence
          Length = 3523

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 126 tcctccgggaggctggcggaggggc 102
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 415     ggcggtggccgcgctgctcgc 435
               |||||||||||||||||||||
Sbjct: 3390464 ggcggtggccgcgctgctcgc 3390484



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    cgtcgccgccgtcgaggtcg 221
              ||||||||||||||||||||
Sbjct: 133813 cgtcgccgccgtcgaggtcg 133794
to top
>dbj|AK159519.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420022J23 product:splicing factor,
           arginine/serine-rich 6, full insert sequence
          Length = 3523

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 123 tcctccgggaggctggcggaggggc 99
to top
>dbj|AK171709.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830006B22 product:splicing factor,
           arginine/serine-rich 6, full insert sequence
          Length = 2898

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 126 tcctccgggaggctggcggaggggc 102
to top
>dbj|AK004831.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1210001E11 product:SPLICING FACTOR,
           ARGININE/SERINE-RICH 6 homolog [Homo sapiens], full
           insert sequence
          Length = 1753

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 345 tcctccgggaggatggcggaggggc 369
           |||||||||||| ||||||||||||
Sbjct: 126 tcctccgggaggctggcggaggggc 102
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 415      ggcggtggccgcgctgctcgc 435
                |||||||||||||||||||||
Sbjct: 25421581 ggcggtggccgcgctgctcgc 25421561



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 198      ctgccgtcgccgccgtcgag 217
                ||||||||||||||||||||
Sbjct: 18214189 ctgccgtcgccgccgtcgag 18214170
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 195      cctctgccgtcgccgccgtcg 215
                |||||||||||||||||||||
Sbjct: 22981573 cctctgccgtcgccgccgtcg 22981553
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 124      cctcccttccccgatctccca 144
                |||||||||||||||||||||
Sbjct: 18065445 cctcccttccccgatctccca 18065425



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 107      cgcctcctccgctgcaccct 126
                ||||||||||||||||||||
Sbjct: 19820193 cgcctcctccgctgcaccct 19820212
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 412      cgcggcggtggccgcgctgct 432
                |||||||||||||||||||||
Sbjct: 22442174 cgcggcggtggccgcgctgct 22442194



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 200      gccgtcgccgccgtcgaggtc 220
                |||||||||||||||||||||
Sbjct: 20240090 gccgtcgccgccgtcgaggtc 20240110



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                                
Query: 352      ggaggatggcggagg-ggccgcgagcgagggg 382
                ||||||||||||||| ||| ||||||||||||
Sbjct: 23147380 ggaggatggcggaggcggcggcgagcgagggg 23147349



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 104      ctccgcctcctccgctgcac 123
                ||||||||||||||||||||
Sbjct: 15020663 ctccgcctcctccgctgcac 15020644
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 124      cctcccttccccgatctccca 144
                |||||||||||||||||||||
Sbjct: 16287312 cctcccttccccgatctccca 16287332
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 277     cttcgccgaggttgcccaggg 297
               |||||||||||||||||||||
Sbjct: 1091823 cttcgccgaggttgcccaggg 1091843
to top
>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487H05
          Length = 176057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    cctcccttccccgatctccca 144
              |||||||||||||||||||||
Sbjct: 121799 cctcccttccccgatctccca 121819
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 124      cctcccttccccgatctccca 144
                |||||||||||||||||||||
Sbjct: 18074698 cctcccttccccgatctccca 18074678



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 107      cgcctcctccgctgcaccct 126
                ||||||||||||||||||||
Sbjct: 19831469 cgcctcctccgctgcaccct 19831488
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 195      cctctgccgtcgccgccgtcg 215
                |||||||||||||||||||||
Sbjct: 23291483 cctctgccgtcgccgccgtcg 23291463
to top
>emb|AL590418.16| Mouse DNA sequence from clone RP23-206I14 on chromosome 2, complete
              sequence
          Length = 175045

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 345    tcctccgggaggatggcggaggggc 369
              |||||||||||| ||||||||||||
Sbjct: 169893 tcctccgggaggctggcggaggggc 169869
to top
>ref|XM_472176.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ctgccgtcgccgccgtcgag 217
           ||||||||||||||||||||
Sbjct: 31  ctgccgtcgccgccgtcgag 50
to top
>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0076A09, complete sequence
          Length = 157010

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   ctccgcctcctccgctgcac 123
             ||||||||||||||||||||
Sbjct: 49413 ctccgcctcctccgctgcac 49394
to top
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0096G08 map E1363S, complete sequence
          Length = 140681

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   cgcctcctccgctgcaccct 126
             ||||||||||||||||||||
Sbjct: 81231 cgcctcctccgctgcaccct 81250
to top
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 352   ggaggatggcggagg-ggccgcgagcgagggg 382
             ||||||||||||||| ||| ||||||||||||
Sbjct: 79155 ggaggatggcggaggcggcggcgagcgagggg 79124
to top
>ref|XM_420351.1| PREDICTED: Gallus gallus similar to ring finger protein 128
           (LOC422382), mRNA
          Length = 1318

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 413 gcggcggtggccgcgctgct 432
           ||||||||||||||||||||
Sbjct: 40  gcggcggtggccgcgctgct 59
to top
>gb|BC026213.1| Homo sapiens F-box and WD-40 domain protein 11, transcript variant 2,
            mRNA (cDNA clone MGC:21122 IMAGE:4419029), complete cds
          Length = 4395

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 108  gcctcctccgctgcaccctcccttcccc 135
            ||||||||| |||| |||||||||||||
Sbjct: 3976 gcctcctcccctgccccctcccttcccc 3949
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 91      ccgtgcgaccgagctccgcc 110
               ||||||||||||||||||||
Sbjct: 2041340 ccgtgcgaccgagctccgcc 2041359
to top
>gb|AE007269.1| Sinorhizobium meliloti 1021 plasmid pSymA section 75 of 121 of the
            complete plasmid sequence
          Length = 8430

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  gccgaggcgttcctccggga 354
            ||||||||||||||||||||
Sbjct: 3179 gccgaggcgttcctccggga 3160
to top
>ref|NM_012300.2| Homo sapiens F-box and WD-40 domain protein 11 (FBXW11), transcript
            variant 3, mRNA
          Length = 4575

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 108  gcctcctccgctgcaccctcccttcccc 135
            ||||||||| |||| |||||||||||||
Sbjct: 4014 gcctcctcccctgccccctcccttcccc 3987
to top
>ref|NM_033645.2| Homo sapiens F-box and WD-40 domain protein 11 (FBXW11), transcript
            variant 1, mRNA
          Length = 4473

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 108  gcctcctccgctgcaccctcccttcccc 135
            ||||||||| |||| |||||||||||||
Sbjct: 3912 gcctcctcccctgccccctcccttcccc 3885
to top
>ref|NM_033644.2| Homo sapiens F-box and WD-40 domain protein 11 (FBXW11), transcript
            variant 2, mRNA
          Length = 4536

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 108  gcctcctccgctgcaccctcccttcccc 135
            ||||||||| |||| |||||||||||||
Sbjct: 3975 gcctcctcccctgccccctcccttcccc 3948
to top
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence
          Length = 165049

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   cggcggtggccgcgctgctc 433
             ||||||||||||||||||||
Sbjct: 54350 cggcggtggccgcgctgctc 54369
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    ccgcggcggtggccgcgctg 430
              ||||||||||||||||||||
Sbjct: 368884 ccgcggcggtggccgcgctg 368903
to top
>ref|XM_762134.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_113_4136_3006)
           partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 ttacgccgacctcactgccg 332
           ||||||||||||||||||||
Sbjct: 976 ttacgccgacctcactgccg 957
to top
>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
            transport protein, helix-turn-helix regulator (pkeRI),
            P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
            P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
            PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
            cds; pkeAIV gene, complete sequence; type I PKS,
            monooxygenases, transporter, ketoacyl-ACP synthase
            (typeII), acyl carrier protien, amino transferase, and
            DNA-binding protein genes, complete cds; and unknown
            genes
          Length = 68451

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ggccacggccatggcggcga 68
            ||||||||||||||||||||
Sbjct: 2218 ggccacggccatggcggcga 2199
to top
>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA
          Length = 15358

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   cggcggtggccgcgctgctc 433
             ||||||||||||||||||||
Sbjct: 13116 cggcggtggccgcgctgctc 13135
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 408     tctccgcggcggtggccgcg 427
               ||||||||||||||||||||
Sbjct: 4719279 tctccgcggcggtggccgcg 4719260
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     ccgtgcgaccgagctccgcc 110
              ||||||||||||||||||||
Sbjct: 202879 ccgtgcgaccgagctccgcc 202898
to top
>gb|AC011387.5| Homo sapiens chromosome 5 clone CTB-168B7, complete sequence
          Length = 164055

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 108   gcctcctccgctgcaccctcccttcccc 135
             ||||||||| |||| |||||||||||||
Sbjct: 39248 gcctcctcccctgccccctcccttcccc 39275
to top
>gb|AY044272.1| Pseudomonas sp. B13 3-oxoadipate:succinyl-CoA transferase subunit A
            (catI), 3-oxoadipate:succinyl-CoA transferase subunit B
            (catJ), 3-oxoadipyl-CoA thiolase (catF), and 3-oxoadipate
            enol-lactone hydrolase (catD) genes, complete cds; and
            unknown gene
          Length = 5888

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 48   cggccacggccatggcggcgaccaccgc 75
            |||||||||| | |||||||||||||||
Sbjct: 2146 cggccacggcgaaggcggcgaccaccgc 2173
to top
>gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, complete cds
          Length = 15358

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   cggcggtggccgcgctgctc 433
             ||||||||||||||||||||
Sbjct: 13116 cggcggtggccgcgctgctc 13135
to top
>gb|AC011410.6|AC011410 Homo sapiens chromosome 5 clone CTB-78H18, complete sequence
          Length = 119649

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 108  gcctcctccgctgcaccctcccttcccc 135
            ||||||||| |||| |||||||||||||
Sbjct: 2890 gcctcctcccctgccccctcccttcccc 2863
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      ccgtgcgaccgagctccgcc 110
               ||||||||||||||||||||
Sbjct: 2122046 ccgtgcgaccgagctccgcc 2122027
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgaggcgttcctccgggagg 356
               ||||||||||||||||||||
Sbjct: 4698211 cgaggcgttcctccgggagg 4698192
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 422      gccgcgctgctcgcattcacgcag 445
                |||||||||||||| |||||||||
Sbjct: 28350179 gccgcgctgctcgccttcacgcag 28350156
to top
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   gccgcgctgctcgcattcacgcag 445
             |||||||||||||| |||||||||
Sbjct: 62757 gccgcgctgctcgccttcacgcag 62734
to top
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0623A10
          Length = 156517

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 422    gccgcgctgctcgcattcacgcag 445
              |||||||||||||| |||||||||
Sbjct: 148208 gccgcgctgctcgccttcacgcag 148185
to top
>gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the complete genome
          Length = 10179

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  cgtcgccgccgtcgaggtcg 221
            ||||||||||||||||||||
Sbjct: 7401 cgtcgccgccgtcgaggtcg 7420
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 202     cgtcgccgccgtcgaggtcg 221
               ||||||||||||||||||||
Sbjct: 2658652 cgtcgccgccgtcgaggtcg 2658633
to top
>dbj|AK066733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074I15, full
           insert sequence
          Length = 3961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 352 ggaggatggcggagg-ggccgcgagcgagggg 382
           ||||||||||||||| ||| ||||||||||||
Sbjct: 177 ggaggatggcggaggcggcggcgagcgagggg 146
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 41      tcgccaccggccacggccat 60
               ||||||||||||||||||||
Sbjct: 3074022 tcgccaccggccacggccat 3074003
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgaggcgttcctccgggagg 356
               ||||||||||||||||||||
Sbjct: 4698189 cgaggcgttcctccgggagg 4698170
to top
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17,
             complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctgccgtcgccgccgtcgag 217
             ||||||||||||||||||||
Sbjct: 49863 ctgccgtcgccgccgtcgag 49844
to top
>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 161762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    cgaggcgttcctccgggagg 356
              ||||||||||||||||||||
Sbjct: 148923 cgaggcgttcctccgggagg 148942
to top
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 147355

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   cgaggcgttcctccgggagg 356
             ||||||||||||||||||||
Sbjct: 53916 cgaggcgttcctccgggagg 53935
to top
>gb|AC164564.3| Mus musculus BAC clone RP23-96N11 from chromosome 7, complete sequence
          Length = 247415

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    cggcggtggccgcgctgctc 433
              ||||||||||||||||||||
Sbjct: 238626 cggcggtggccgcgctgctc 238645
to top
>dbj|AB014596.1| Homo sapiens mRNA for KIAA0696 protein, partial cds
          Length = 4230

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 108  gcctcctccgctgcaccctcccttcccc 135
            ||||||||| |||| |||||||||||||
Sbjct: 3669 gcctcctcccctgccccctcccttcccc 3642


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,594,570
Number of Sequences: 3902068
Number of extensions: 3594570
Number of successful extensions: 174046
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 171202
Number of HSP's gapped (non-prelim): 2848
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top