ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl42d09 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 206 bits (524), Expect = 2e-53 Identities = 103/103 (100%), Positives = 103/103 (100%) Frame = +2 Query: 107 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 286 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 287 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEV 415 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEV Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEV 103
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 177 bits (449), Expect = 9e-45 Identities = 85/103 (82%), Positives = 98/103 (95%), Gaps = 1/103 (0%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGVTCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 290 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTGESKFGLTFDWEV 415 VD +NG RGKVGAEA LEQW+T SLPSLTTGES+FG+TFDW+V Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDV 103
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 162 bits (410), Expect = 3e-40 Identities = 77/102 (75%), Positives = 92/102 (90%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 +LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+GVTCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEV 415 VD +NG RG+VG EA LEQW+TSLPSLTTGESKFG+TF+WEV Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEV 101
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 110 bits (274), Expect = 2e-24 Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 3/104 (2%) Frame = +2 Query: 110 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLIS 280 + G L D LTG ++KGTVVLM+KNVLD NDF A+ +D + EFLG +T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 281 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 S D +NG +GK+G A LE W+T++ SLT GES F +TFD+E Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYE 104
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 107 bits (268), Expect = 9e-24 Identities = 52/102 (50%), Positives = 73/102 (71%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 +LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G +TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEV 415 DQ+N GRG VG+EA LEQ +T LPS++ GESK + F+WE+ Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEM 101
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 95.9 bits (237), Expect = 3e-20 Identities = 47/102 (46%), Positives = 70/102 (68%) Frame = +2 Query: 107 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 286 M LGG++D + G + ++KG V+LM+KNVLD + GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 287 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 +V+ D G GK+ A LE W+T + +T GES F +TFDW+ Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWD 100
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 95.9 bits (237), Expect = 3e-20 Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 6/108 (5%) Frame = +2 Query: 107 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVTC 268 M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +GV Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 269 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 +L+S+TA D NGGRGK+G A LE+ V ++ S GES F + F+W+ Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD 108
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 84.7 bits (208), Expect = 8e-17 Identities = 47/100 (47%), Positives = 63/100 (63%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 L+GGLI G + S ++KGTVV+M+KN LD D ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDW 409 D NG +GK A LE ++ +L L GE+ FG+TFDW Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDW 101
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 79.0 bits (193), Expect = 4e-15 Identities = 48/107 (44%), Positives = 63/107 (58%), Gaps = 18/107 (16%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGVTCQ 271 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 272 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 LIS+T D + G+GKVG + LE + SLP+L GES F + F+W+ Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWD 114
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 75.9 bits (185), Expect = 4e-14 Identities = 41/85 (48%), Positives = 57/85 (67%) Frame = +2 Query: 158 RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAE 337 ++KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 338 LEQWVTSLPSLTTGESKFGLTFDWE 412 LE TSLP+L GES F + F+W+ Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWD 88
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 75.1 bits (183), Expect = 6e-14 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 13/114 (11%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 250 +LGGL+ ++ ++KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 251 GKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L G+S F + F+W+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD 106
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 75.1 bits (183), Expect = 6e-14 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 13/102 (12%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGVTCQLISST 286 N+ ++KGTVVLMRKNVLD+N D + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 287 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 D G+GK+G LE ++SLP+L G+S F + F+W+ Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD 109
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 73.6 bits (179), Expect = 2e-13 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = +2 Query: 140 GANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGK 319 G + S ++KGTVV+M KNVLD D ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 320 VGAEAELEQWVTSLPSLTTG-ESKFGLTFDW 409 A LE + +L LT G E+ FG+TFDW Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDW 102
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 69.3 bits (168), Expect = 3e-12 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 18/103 (17%) Frame = +2 Query: 158 RLKGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGVTCQLISS 283 ++KGTVVLMRKNVLD N + +D + FLG+ V QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 284 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 T + G+GKVG + LE + SLP+L GES F + F+W+ Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD 118
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 68.2 bits (165), Expect = 7e-12 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 20/108 (18%) Frame = +2 Query: 149 KSARLKGTVVLMRKNVLDLNDFGA--------------------TIIDGIGEFLGKGVTC 268 + +LKGTV+LM+KNVLD+N A +IID FLG+ V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 269 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 +LIS+T D G+GKV EA LE +TS+P+L +S F + F+W+ Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD 113
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 65.1 bits (157), Expect = 6e-11 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 22/111 (19%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLNDF------------------GATIIDGIGE----FLGKG 259 +K ++KGTVVLM KNVLD N G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 260 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 ++ QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWD 114
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 63.2 bits (152), Expect = 2e-10 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 22/111 (19%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 259 N+ ++KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 260 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 + QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ Sbjct: 66 IAIQLISATKT--DGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD 114
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 62.0 bits (149), Expect = 5e-10 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 13/101 (12%) Frame = +2 Query: 149 KSARLKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGV----------TCQLISSTA 289 K ++KGT+V+M+KNVLD+N G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 412 D GG+GK+G L +T LP+L GE + + F+W+ Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWD 102
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 34.3 bits (77), Expect = 0.12 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPR 247 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQ 1704 Query: 246 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 130 N S V P +L SS + T PL + PV++ Sbjct: 1705 NIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 32.7 bits (73), Expect = 0.35 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 S + + R LDS V+ +V C +S + PRP ++W +++ LPR +P Sbjct: 397 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTP 452 Query: 237 MP--SMMVAP 214 + S++++P Sbjct: 453 LESGSLLISP 462
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 31.2 bits (69), Expect = 1.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 131 TLTGANKSARLKGTVVLMRKNVLDLNDFGATI 226 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 30.8 bits (68), Expect = 1.3 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 3/99 (3%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPR 247 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1648 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQ 1707 Query: 246 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 130 N S V P SS + T PL + PV++ Sbjct: 1708 NIKFSSAPVTPNVPSSSPAPNIQTGRPLVLSSRATPVQL 1746
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -1 Query: 402 KVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLS 298 +++P + +PVV+ ++ SSS+SAP P PP S Sbjct: 552 EIKPYVVNPVVATAAAASNSSSSSSAPLPPPPPPS 586
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -1 Query: 330 SAPTFPRPPLSWS-TAVELISWQVTPLPRNSPMPSMMVAPKSLRSS 196 +A T P PPLS + ++V ++S PL +NS +PS++ +S R+S Sbjct: 960 AASTMPPPPLSRAPSSVSMVS--PPPLHKNSRVPSLVATSESPRAS 1003
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 414 TSQSK-VRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 TSQ+K + P+ P +S + + A APT P PP T + + + P P Sbjct: 91 TSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEP 150 Query: 237 MPS 229 +P+ Sbjct: 151 VPA 153
>SYA_PORGI (Q7MV54) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 29.6 bits (65), Expect = 2.9 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 17/94 (18%) Frame = +2 Query: 161 LKGTVVLMRKNVLDLNDFGATIIDGIGEF-------LGKGVTCQLISSTAVDQDNGG--- 310 L+ + L+ K + D G+T++DG+ F +T ++S + D G Sbjct: 375 LETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDT 434 Query: 311 -------RGKVGAEAELEQWVTSLPSLTTGESKF 391 R + A E WV L GESKF Sbjct: 435 EMQKQKERARNAAAVEAGDWVV----LREGESKF 464
>GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precursor| (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha) (Antigen CD42b-alpha) (CD42b antigen) [Contains: Glycocalicin] Length = 626 Score = 29.3 bits (64), Expect = 3.8 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 ST++ P PV +T + S PT P P + A + + TP+P + Sbjct: 378 STTEPTPSPTTSEPVPEPAPNMTTLEPTPS-PTTPEP--TSEPAPSPTTPEPTPIPTIAT 434 Query: 237 MPSMMVAPKSLRSSTFLRMSTTVPLS 160 P+++V+ SL + ++TT P+S Sbjct: 435 SPTILVSATSLITPKSTFLTTTKPVS 460
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.3 bits (64), Expect = 3.8 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -1 Query: 405 SKVRPNL-----DSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNS 241 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 240 PMP--SMMVAPKSL 205 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.9 bits (63), Expect = 5.0 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -1 Query: 348 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVTPLPRNSPMPSMM----VAPKSLR 202 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 201 SSTFLR 184 TFLR Sbjct: 63 PETFLR 68
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 5.0 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 5.0 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 269 GGYQQRPPGQQQGGHEQGRQGQEGGYQQRPSGQQQGGHQQGR 310 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP G H Q R Sbjct: 223 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGR 264 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 200 GGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 241 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP G H Q R Sbjct: 177 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGR 218 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 154 GGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 195
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 28.9 bits (63), Expect = 5.0 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 S + + R LDS V+ +V C +S + PRP ++W +++ LPR + Sbjct: 403 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTL 458 Query: 237 MP--SMMVAP 214 + S++++P Sbjct: 459 LESGSLLISP 468
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 28.9 bits (63), Expect = 5.0 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP---- 250 STS +P LD+ +DG S ASA P+P + + + S TP P Sbjct: 842 STSNETTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSF 901 Query: 249 ----------RNSPMPSMMVAPKSLRSS 196 N+P + AP S +S Sbjct: 902 GNNSGVKASSNNNPSTNSSTAPFSFGTS 929
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +2 Query: 182 MRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 361 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 362 PSL 370 L Sbjct: 147 EKL 149
>AMPR_PSEAE (P24734) HTH-type transcriptional activator ampR| Length = 296 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 382 LPRRQRRQARHPLLQLRLRAH 320 LPR + QARHP + LRL H Sbjct: 110 LPRLEDFQARHPFIDLRLSTH 130
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 183 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153
>PACC_SCLSC (Q9P413) pH-response transcription factor pacC/RIM101| Length = 625 Score = 25.4 bits (54), Expect(2) = 8.2 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = -1 Query: 393 PNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPMPSMMVAP 214 P++ + S TH S S S+ T P S S V+ NSPM S ++P Sbjct: 382 PHVSTSYASAPMTATHSSHSVSSGTPALTPPSSS---------VSYTSGNSPMSSSGMSP 432 Query: 213 KSLRSST 193 S SST Sbjct: 433 ISRHSST 439 Score = 21.2 bits (43), Expect(2) = 8.2 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -2 Query: 119 LPAASCSWPPLLAFTAPTNGTSTLF 45 LPA + + P + TAPT+ T F Sbjct: 447 LPAVTLGYSPHHSATAPTSTLGTNF 471
>ZN318_HUMAN (Q5VUA4) Zinc finger protein 318 (Endocrine regulatory protein)| Length = 2099 Score = 28.1 bits (61), Expect = 8.6 Identities = 20/76 (26%), Positives = 35/76 (46%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 +++Q+K+RPNL P L CS++ S P PL+ +++ PLP Sbjct: 1162 TSTQTKIRPNLPIPSTV---LRKSCSATMSKPA----PLNTFLSIKSSGTTAKPLPVVKE 1214 Query: 237 MPSMMVAPKSLRSSTF 190 + ++ P + S F Sbjct: 1215 SSADLLLPPDIISKAF 1230
>VIV_ORYSA (P37398) Protein viviparous homolog| Length = 728 Score = 28.1 bits (61), Expect = 8.6 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 11/56 (19%) Frame = +1 Query: 64 LVGAVKARRGGQEQ-DAAGRADRHPHGGEQE-------RPA---QGHGGAHAQERA 198 L+ VK RR QEQ +++G +H HG ++ +PA G GG + E A Sbjct: 632 LIRGVKVRRAAQEQGNSSGAVGKHKHGSPEKPGVSSNTKPAGAEDGTGGDDSPEAA 687
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 28.1 bits (61), Expect = 8.6 Identities = 23/76 (30%), Positives = 33/76 (43%) Frame = -1 Query: 414 TSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPM 235 T++ V+PN PV + T TF RPP++ ST + V P RN P+ Sbjct: 412 TAKEAVKPN--QPV----EVQTPLPKQELPETFQRPPIASSTPMPRAEPSVIPAARNEPI 465 Query: 234 PSMMVAPKSLRSSTFL 187 L++S FL Sbjct: 466 --------GLKASDFL 473 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,371,658 Number of Sequences: 219361 Number of extensions: 833943 Number of successful extensions: 2652 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 2453 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2618 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
