ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PATL2_ARATH (Q56ZI2) Patellin-2 35 0.062
2FIBP_ADE02 (P03275) Fiber protein (pIV) 31 0.89
3CPN_DROME (Q02910) Calphotin 30 1.2
4DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC... 30 1.5
5CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... 30 2.0
6AMOT_HUMAN (Q4VCS5) Angiomotin 29 2.6
7MUC1_YEAST (P08640) Mucin-like protein 1 precursor 29 3.4
8PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... 28 4.4
9APT_STRCO (P52561) Adenine phosphoribosyltransferase (EC 2.4.2.7... 28 4.4
10FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 28 5.8
11Y220_SILPO (Q5LX20) UPF0247 protein SPO0220 28 5.8

>PATL2_ARATH (Q56ZI2) Patellin-2|
          Length = 683

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 26/94 (27%), Positives = 37/94 (39%)
 Frame = -2

Query: 286 VEVAPAAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXXXXXXXVHRKEKEEG*RVAT 107
           VE  PAAP+ A T   E+ P AP+T  T   E                 KE+E+   V T
Sbjct: 197 VETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTT 256

Query: 106 VEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 5
              +  + +      E      A   TQ++R +K
Sbjct: 257 ETKEEEKAAPGETKKE----EKATASTQVKRASK 286



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -2

Query: 313 AQVAARTGAVEVAPAAPLTACTGA------VEVAPVAPLTART 203
           A V A T   E+ PAAP+T  T        VE  P AP+T  T
Sbjct: 203 APVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTET 245



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>FIBP_ADE02 (P03275) Fiber protein (pIV)|
          Length = 582

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 313 AQVAARTGAVEVAPAAPLTACTGAVEVAPVAPLTARTGAL 194
           A +   +GA+ VA  APL   +GA+ V   APLT +   L
Sbjct: 103 APLTITSGALTVATTAPLIVTSGALSVQSQAPLTVQDSKL 142



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 286 VEVAPAAPLTACTGAVEVAPVAPLTARTGAL 194
           + +  +APLT  +GA+ VA  APL   +GAL
Sbjct: 97  ISLDTSAPLTITSGALTVATTAPLIVTSGAL 127



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>CPN_DROME (Q02910) Calphotin|
          Length = 864

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -2

Query: 322 VAVAQVAARTGAVEVAPAAPLTACTGAVEVAPVAPLTART 203
           V VA  A  T  V  A A+P  +   AVE A VAP++A T
Sbjct: 245 VVVAPPATETPVVAPAAASPHVSVAPAVETAVVAPVSAST 284



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>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC|
           3.1.3.16)
          Length = 295

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 19  LAACVWRLQA--IREARGRPARHCRGQRRLRQSPLVTPPP 132
           LAA V  L A  +REA GR A+ CR   R     L+ PPP
Sbjct: 166 LAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPP 205



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>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)|
           (Carboxypeptidase H) (CPH) (Enkephalin convertase)
           (Prohormone-processing carboxypeptidase)
          Length = 476

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 16  SLAACVWRLQAIREARGRPARHCRGQRRLRQ 108
           +LAAC W L A  +  G PA   R +RRL+Q
Sbjct: 15  ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45



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>AMOT_HUMAN (Q4VCS5) Angiomotin|
          Length = 1084

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -2

Query: 319  AVAQVAARTGAVEVAPAAPLTACTGAVEVAPVAPLTARTGA 197
            AVA  AA   AV+VAPAAP      A+   P AP  A+  A
Sbjct: 958  AVAPSAAAAAAVQVAPAAPAPVPAPALVPVP-APAAAQASA 997



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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +3

Query: 75  APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 203
           AP+P P+SSS + +  PSS  F                 S+ P
Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906



 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
 Frame = +3

Query: 57  SSRPAGAPLPRPASSSTVATRHP-SSFSFRXXXXXXXXXXXXXXXXSRAPVRAVXXXXXX 233
           ++  + AP+P P+SS+T ++  P +S +                  S APV         
Sbjct: 546 TTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 605

Query: 234 XXXXPXXXXXXXXXXXXXXPVRAATCATAT 323
               P              PV ++T  +++
Sbjct: 606 SSSAPAPTPSSSTTESSSAPVTSSTTESSS 635



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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%)
 Frame = -2

Query: 115 VATVEDDAGRGSGAPA----------GLELHVLPAAA 35
           +A+V D  GRG G PA          GL L+++PAAA
Sbjct: 17  IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53



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>APT_STRCO (P52561) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)|
          Length = 182

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
 Frame = -2

Query: 319 AVAQVAARTGAVEVAP--------AAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXX 164
           A+A+ A RTGA +V           AP+    G +   PV       GA           
Sbjct: 47  ALAEAAGRTGATKVVGLEARGFILGAPVALRAG-LGFIPVRKAGKLPGATLSQAYDLEYG 105

Query: 163 XXXXXVHRKEKEEG*RVATVEDDAGRGSGAPAGLEL 56
                VH ++   G RV  V+D    G  A A LEL
Sbjct: 106 SAEIEVHAEDLTAGDRVLVVDDVLATGGTAEASLEL 141



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>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 57  SSRPAGAPLPRPASSSTVATRHPSSFS 137
           +++PA  P+P PA++   AT+ PSS S
Sbjct: 207 AAQPAPVPVPAPAATPKAATQAPSSRS 233



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>Y220_SILPO (Q5LX20) UPF0247 protein SPO0220|
          Length = 156

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 118 RVATVEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 5
           RV  VED    G GA A L    LPA A    L+ + K
Sbjct: 40  RVVEVEDKKNAGMGAEAALLRKALPAGAVLCTLDERGK 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,443,951
Number of Sequences: 219361
Number of extensions: 367830
Number of successful extensions: 1904
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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