Clone Name | bastl42d05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PATL2_ARATH (Q56ZI2) Patellin-2 | 35 | 0.062 | 2 | FIBP_ADE02 (P03275) Fiber protein (pIV) | 31 | 0.89 | 3 | CPN_DROME (Q02910) Calphotin | 30 | 1.2 | 4 | DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC... | 30 | 1.5 | 5 | CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... | 30 | 2.0 | 6 | AMOT_HUMAN (Q4VCS5) Angiomotin | 29 | 2.6 | 7 | MUC1_YEAST (P08640) Mucin-like protein 1 precursor | 29 | 3.4 | 8 | PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... | 28 | 4.4 | 9 | APT_STRCO (P52561) Adenine phosphoribosyltransferase (EC 2.4.2.7... | 28 | 4.4 | 10 | FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 | 28 | 5.8 | 11 | Y220_SILPO (Q5LX20) UPF0247 protein SPO0220 | 28 | 5.8 |
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>PATL2_ARATH (Q56ZI2) Patellin-2| Length = 683 Score = 34.7 bits (78), Expect = 0.062 Identities = 26/94 (27%), Positives = 37/94 (39%) Frame = -2 Query: 286 VEVAPAAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXXXXXXXVHRKEKEEG*RVAT 107 VE PAAP+ A T E+ P AP+T T E KE+E+ V T Sbjct: 197 VETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTT 256 Query: 106 VEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 5 + + + E A TQ++R +K Sbjct: 257 ETKEEEKAAPGETKKE----EKATASTQVKRASK 286 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Frame = -2 Query: 313 AQVAARTGAVEVAPAAPLTACTGA------VEVAPVAPLTART 203 A V A T E+ PAAP+T T VE P AP+T T Sbjct: 203 APVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTET 245
>FIBP_ADE02 (P03275) Fiber protein (pIV)| Length = 582 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2 Query: 313 AQVAARTGAVEVAPAAPLTACTGAVEVAPVAPLTARTGAL 194 A + +GA+ VA APL +GA+ V APLT + L Sbjct: 103 APLTITSGALTVATTAPLIVTSGALSVQSQAPLTVQDSKL 142 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 286 VEVAPAAPLTACTGAVEVAPVAPLTARTGAL 194 + + +APLT +GA+ VA APL +GAL Sbjct: 97 ISLDTSAPLTITSGALTVATTAPLIVTSGAL 127
>CPN_DROME (Q02910) Calphotin| Length = 864 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -2 Query: 322 VAVAQVAARTGAVEVAPAAPLTACTGAVEVAPVAPLTART 203 V VA A T V A A+P + AVE A VAP++A T Sbjct: 245 VVVAPPATETPVVAPAAASPHVSVAPAVETAVVAPVSAST 284
>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 295 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +1 Query: 19 LAACVWRLQA--IREARGRPARHCRGQRRLRQSPLVTPPP 132 LAA V L A +REA GR A+ CR R L+ PPP Sbjct: 166 LAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPP 205
>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)| (Carboxypeptidase H) (CPH) (Enkephalin convertase) (Prohormone-processing carboxypeptidase) Length = 476 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 16 SLAACVWRLQAIREARGRPARHCRGQRRLRQ 108 +LAAC W L A + G PA R +RRL+Q Sbjct: 15 ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = -2 Query: 319 AVAQVAARTGAVEVAPAAPLTACTGAVEVAPVAPLTARTGA 197 AVA AA AV+VAPAAP A+ P AP A+ A Sbjct: 958 AVAPSAAAAAAVQVAPAAPAPVPAPALVPVP-APAAAQASA 997
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +3 Query: 75 APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 203 AP+P P+SSS + + PSS F S+ P Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 1/90 (1%) Frame = +3 Query: 57 SSRPAGAPLPRPASSSTVATRHP-SSFSFRXXXXXXXXXXXXXXXXSRAPVRAVXXXXXX 233 ++ + AP+P P+SS+T ++ P +S + S APV Sbjct: 546 TTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 605 Query: 234 XXXXPXXXXXXXXXXXXXXPVRAATCATAT 323 P PV ++T +++ Sbjct: 606 SSSAPAPTPSSSTTESSSAPVTSSTTESSS 635
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%) Frame = -2 Query: 115 VATVEDDAGRGSGAPA----------GLELHVLPAAA 35 +A+V D GRG G PA GL L+++PAAA Sbjct: 17 IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53
>APT_STRCO (P52561) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 182 Score = 28.5 bits (62), Expect = 4.4 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 8/96 (8%) Frame = -2 Query: 319 AVAQVAARTGAVEVAP--------AAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXX 164 A+A+ A RTGA +V AP+ G + PV GA Sbjct: 47 ALAEAAGRTGATKVVGLEARGFILGAPVALRAG-LGFIPVRKAGKLPGATLSQAYDLEYG 105 Query: 163 XXXXXVHRKEKEEG*RVATVEDDAGRGSGAPAGLEL 56 VH ++ G RV V+D G A A LEL Sbjct: 106 SAEIEVHAEDLTAGDRVLVVDDVLATGGTAEASLEL 141
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 57 SSRPAGAPLPRPASSSTVATRHPSSFS 137 +++PA P+P PA++ AT+ PSS S Sbjct: 207 AAQPAPVPVPAPAATPKAATQAPSSRS 233
>Y220_SILPO (Q5LX20) UPF0247 protein SPO0220| Length = 156 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -2 Query: 118 RVATVEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 5 RV VED G GA A L LPA A L+ + K Sbjct: 40 RVVEVEDKKNAGMGAEAALLRKALPAGAVLCTLDERGK 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,443,951 Number of Sequences: 219361 Number of extensions: 367830 Number of successful extensions: 1904 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1776 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1888 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)