>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  198 bits (100), Expect = 8e-48
 Identities = 157/176 (89%)
 Strand = Plus / Minus

                                                                            
Query: 134      atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc 193
                |||||||||||||| ||||| ||||||||  ||||||||||||||||||||| |||||||
Sbjct: 26160330 atggaggaggacgcggaggggatggaccggttcgacatggacggcgacttcgagggcggc 26160271

                                                                            
Query: 194      cgcttcgaccgcgacggggagttctactacaagagccgccgccagcgggcgccccagacc 253
                || |||| | | ||||| |||||||||||| || |||||||| |||| ||||| ||||| 
Sbjct: 26160270 cggttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgcgccgcagacg 26160211

                                                                        
Query: 254      cgcgacgacgctgtctacggcgtcttcgccgagggggactccgactacgactccga 309
                |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 26160210 cgcgacgacgcgctctacggcgtcttcgccgagggcgactccgactacgactccga 26160155

>dbj|AK073946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N19, full
           insert sequence
          Length = 2778

 Score =  198 bits (100), Expect = 8e-48
 Identities = 157/176 (89%)
 Strand = Plus / Plus

                                                                       
Query: 134 atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc 193
           |||||||||||||| ||||| ||||||||  ||||||||||||||||||||| |||||||
Sbjct: 69  atggaggaggacgcggaggggatggaccggttcgacatggacggcgacttcgagggcggc 128

                                                                       
Query: 194 cgcttcgaccgcgacggggagttctactacaagagccgccgccagcgggcgccccagacc 253
           || |||| | | ||||| |||||||||||| || |||||||| |||| ||||| ||||| 
Sbjct: 129 cggttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgcgccgcagacg 188

                                                                   
Query: 254 cgcgacgacgctgtctacggcgtcttcgccgagggggactccgactacgactccga 309
           |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 189 cgcgacgacgcgctctacggcgtcttcgccgagggcgactccgactacgactccga 244

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  198 bits (100), Expect = 8e-48
 Identities = 157/176 (89%)
 Strand = Plus / Minus

                                                                            
Query: 134      atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc 193
                |||||||||||||| ||||| ||||||||  ||||||||||||||||||||| |||||||
Sbjct: 26088506 atggaggaggacgcggaggggatggaccggttcgacatggacggcgacttcgagggcggc 26088447

                                                                            
Query: 194      cgcttcgaccgcgacggggagttctactacaagagccgccgccagcgggcgccccagacc 253
                || |||| | | ||||| |||||||||||| || |||||||| |||| ||||| ||||| 
Sbjct: 26088446 cggttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgcgccgcagacg 26088387

                                                                        
Query: 254      cgcgacgacgctgtctacggcgtcttcgccgagggggactccgactacgactccga 309
                |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 26088386 cgcgacgacgcgctctacggcgtcttcgccgagggcgactccgactacgactccga 26088331

>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144241

 Score =  198 bits (100), Expect = 8e-48
 Identities = 157/176 (89%)
 Strand = Plus / Minus

                                                                         
Query: 134   atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc 193
             |||||||||||||| ||||| ||||||||  ||||||||||||||||||||| |||||||
Sbjct: 50568 atggaggaggacgcggaggggatggaccggttcgacatggacggcgacttcgagggcggc 50509

                                                                         
Query: 194   cgcttcgaccgcgacggggagttctactacaagagccgccgccagcgggcgccccagacc 253
             || |||| | | ||||| |||||||||||| || |||||||| |||| ||||| ||||| 
Sbjct: 50508 cggttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgcgccgcagacg 50449

                                                                     
Query: 254   cgcgacgacgctgtctacggcgtcttcgccgagggggactccgactacgactccga 309
             |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 50448 cgcgacgacgcgctctacggcgtcttcgccgagggcgactccgactacgactccga 50393

>gb|AF160731.1|AF160731 Oryza officinalis repetitive sequence
          Length = 879

 Score =  167 bits (84), Expect = 3e-38
 Identities = 154/176 (87%), Gaps = 1/176 (0%)
 Strand = Plus / Plus

                                                                       
Query: 134 atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc 193
           ||||||||||| || ||||| ||||||||| ||||||||||||||||||||| ||| || 
Sbjct: 300 atggaggaggatgcggaggggatggaccgcttcgacatggacggcgacttcgagggtgga 359

                                                                       
Query: 194 cgcttcgaccgcgacggggagttctactacaagagccgccgccagcgggcgccccagacc 253
           ||||||| | | ||||| |||||||||||| || |||||||| |||| || |||||||| 
Sbjct: 360 cgcttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgccccccagacg 419

                                                                   
Query: 254 cgcgacgacgctgtctacggcgtcttcgccgagggggactccgactacgactccga 309
           |||||||||||  | ||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 420 cgcgacgacgccctatacggcgtcttcg-cgagggcgactccgactacgactccga 474

>ref|XM_471448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 295  cgactacgactccgaggagga 315
            |||||||||||||||||||||
Sbjct: 1140 cgactacgactccgaggagga 1160

>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
             complete sequence
          Length = 142814

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 295   cgactacgactccgaggagga 315
             |||||||||||||||||||||
Sbjct: 94855 cgactacgactccgaggagga 94835

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 295      cgactacgactccgaggagga 315
                |||||||||||||||||||||
Sbjct: 11086200 cgactacgactccgaggagga 11086180

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     ccagacccgcgacgacgctg 266
               ||||||||||||||||||||
Sbjct: 1466284 ccagacccgcgacgacgctg 1466303

>ref|NM_184874.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 gccatggaggaggacgccgagggc 154
           |||||||||||||||| |||||||
Sbjct: 673 gccatggaggaggacgacgagggc 696

>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003G23, complete sequence
          Length = 135931

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   gccatggaggaggacgccgagggc 154
             |||||||||||||||| |||||||
Sbjct: 72935 gccatggaggaggacgacgagggc 72958

>ref|XM_657233.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4721.2), mRNA
          Length = 3726

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ggactccgactacgactccg 308
           ||||||||||||||||||||
Sbjct: 566 ggactccgactacgactccg 547

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 131      gccatggaggaggacgccgagggc 154
                |||||||||||||||| |||||||
Sbjct: 26761277 gccatggaggaggacgacgagggc 26761254

>ref|XM_533636.2| PREDICTED: Canis familiaris similar to hypoxia-inducible factor-3
            alpha isoform a (LOC476429), mRNA
          Length = 1956

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 130  agccatggaggaggacgccgaggg 153
            ||||||||||||||| ||||||||
Sbjct: 1734 agccatggaggaggaggccgaggg 1711

>emb|AL031729.16|HS159A19 Human DNA sequence from clone RP1-159A19 on chromosome 1p36.13 Contains
             the gene for a novel protein, the FGR gene for
             Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene
             homolog, a novel pseudogene, the 3' end of a novel gene
             and two CpG islands, complete sequence
          Length = 125287

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cgctccctccctccgtctct 40
             ||||||||||||||||||||
Sbjct: 50433 cgctccctccctccgtctct 50414

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      gagccgccgccagcgggcgc 245
                ||||||||||||||||||||
Sbjct: 11375413 gagccgccgccagcgggcgc 11375432

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 131      gccatggaggaggacgccgagggc 154
                |||||||||||||||| |||||||
Sbjct: 26852600 gccatggaggaggacgacgagggc 26852577

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    gccgcttcgaccgcgacggg 211
              ||||||||||||||||||||
Sbjct: 837077 gccgcttcgaccgcgacggg 837058

>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   gagccgccgccagcgggcgc 245
             ||||||||||||||||||||
Sbjct: 75924 gagccgccgccagcgggcgc 75943

>dbj|AK109129.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D08, full
           insert sequence
          Length = 1325

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 gactccgactacgactccga 309
           ||||||||||||||||||||
Sbjct: 743 gactccgactacgactccga 762

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    ggcggccgcttcgaccgcga 207
              ||||||||||||||||||||
Sbjct: 684560 ggcggccgcttcgaccgcga 684579

>dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B07, full
           insert sequence
          Length = 1424

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 gccatggaggaggacgccgagggc 154
           |||||||||||||||| |||||||
Sbjct: 642 gccatggaggaggacgacgagggc 665

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 188     ggcggccgcttcgaccgcga 207
               ||||||||||||||||||||
Sbjct: 1947569 ggcggccgcttcgaccgcga 1947588

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    tggaggaggacgccgagggcatgg 158
              |||||||| |||||||||||||||
Sbjct: 383809 tggaggagaacgccgagggcatgg 383832

>emb|AL627184.18| Mouse DNA sequence from clone RP23-125F21 on chromosome 4, complete
             sequence
          Length = 152069

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cgctccctccctccgtctct 40
             ||||||||||||||||||||
Sbjct: 50727 cgctccctccctccgtctct 50708


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,590,259
Number of Sequences: 3902068
Number of extensions: 1590259
Number of successful extensions: 45704
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45294
Number of HSP's gapped (non-prelim): 409
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)