ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-relate... 31 0.84
2C1QT7_HUMAN (Q9BXJ2) Complement C1q tumor necrosis factor-relate... 31 0.84

>C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-related protein 7|
           precursor
          Length = 289

 Score = 31.2 bits (69), Expect = 0.84
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 112 PAVARFVCPFPGIIYFS 62
           PA  +F+C FPGI YFS
Sbjct: 180 PATGKFICAFPGIYYFS 196



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>C1QT7_HUMAN (Q9BXJ2) Complement C1q tumor necrosis factor-related protein 7|
           precursor
          Length = 289

 Score = 31.2 bits (69), Expect = 0.84
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 112 PAVARFVCPFPGIIYFS 62
           PA  +F+C FPGI YFS
Sbjct: 180 PATGKFICAFPGIYYFS 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,004,594
Number of Sequences: 219361
Number of extensions: 300300
Number of successful extensions: 790
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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