ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl42c09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 133 bits (67), Expect = 6e-28 Identities = 185/223 (82%), Gaps = 6/223 (2%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 ||||| |||| | |||||| |||||||||||||| || ||| | || ||||||||||||| Sbjct: 83699 gcaagttgggaaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgaca 83758 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggcacc- 245 |||||||||||| ||||||| | |||||| || |||||||||||||| ||| ||| | Sbjct: 83759 tccagtacatcagcgacgagatggccagcatccacgccttcctcaccaatctcagcagct 83818 Query: 246 --ggcgacgaggag---cacgacgcccagatccaggactgggcgaagcagatccgcgaca 300 ||| |||| || |||||||| |||| | |||||||| ||||||| ||||||||| Sbjct: 83819 ctggcaacgacgacggccacgacgcgcagaccaaggactggatgaagcaggtccgcgaca 83878 Query: 301 tcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 83879 tcgcctacgacatggaggactgcgtcgacgacttcgcccaccg 83921
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 133 bits (67), Expect = 6e-28 Identities = 185/223 (82%), Gaps = 6/223 (2%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 ||||| |||| | |||||| |||||||||||||| || ||| | || ||||||||||||| Sbjct: 16218488 gcaagttgggaaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgaca 16218547 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggcacc- 245 |||||||||||| ||||||| | |||||| || |||||||||||||| ||| ||| | Sbjct: 16218548 tccagtacatcagcgacgagatggccagcatccacgccttcctcaccaatctcagcagct 16218607 Query: 246 --ggcgacgaggag---cacgacgcccagatccaggactgggcgaagcagatccgcgaca 300 ||| |||| || |||||||| |||| | |||||||| ||||||| ||||||||| Sbjct: 16218608 ctggcaacgacgacggccacgacgcgcagaccaaggactggatgaagcaggtccgcgaca 16218667 Query: 301 tcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 16218668 tcgcctacgacatggaggactgcgtcgacgacttcgcccaccg 16218710 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||||||||||||||| || ||||||||| | |||||| |||||||||| ||||||| Sbjct: 22565456 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22565515 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctca 231 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22565516 cagtacatcaacgacgagctcgccagcatgcaggccttcctca 22565558 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 22555118 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 22555177 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22555178 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22555237 Query: 229 tca 231 ||| Sbjct: 22555238 tca 22555240 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | |||||||||||||||||| || ||||||||| | || ||| Sbjct: 22459357 ccgtgaagtccctcgtcaacaagctgggcagcctcctcgcgcaggagtacaccctcatct 22459298 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22459297 ccggcgtccacgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22459238 Query: 229 tca 231 ||| Sbjct: 22459237 tca 22459235 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 27109028 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 27109087 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 230 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27109088 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 27109131 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 22524465 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 22524406 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 242 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 22524405 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 22524352 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||||||| || | ||||||||||| |||||| ||||||||| Sbjct: 27018164 aggactggatgaagcagatccgcgacgtcacctacgacatcgaggactgcatcgacgact 27018223 Query: 334 tcgctcaccg 343 |||| ||||| Sbjct: 27018224 tcgcgcaccg 27018233 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 87 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 146 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 27017965 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 27018024 Query: 147 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 206 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 27018025 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 27018084 Query: 207 ct 208 || Sbjct: 27018085 ct 27018086 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||||||||||||| Sbjct: 22555279 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 22555338 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 294 cgcgacatcgcgtacgacatcgaagactgcgtcgacgacttc 335 |||||| |||| ||||||||||| |||||| ||||||||||| Sbjct: 22524296 cgcgacgtcgcctacgacatcgaggactgcatcgacgacttc 22524255 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||| ||||||||| Sbjct: 22459196 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 22459137 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 296 cgacatcgcgtacgacatcgaagactgcgtcgac 329 |||| ||||| |||||||||| |||||||||||| Sbjct: 26917466 cgacctcgcgcacgacatcgaggactgcgtcgac 26917499 Score = 42.1 bits (21), Expect = 1.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||| ||| |||| || ||| | || |||||| |||| |||| Sbjct: 27109181 aggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgcatcgatgact 27109240 Query: 334 tcgctcaccggct 346 | || |||||||| Sbjct: 27109241 ttgcgcaccggct 27109253 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcatgcaggccttcctcacc 233 |||||||||||||||||||| Sbjct: 7116200 gcatgcaggccttcctcacc 7116181
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 133 bits (67), Expect = 6e-28 Identities = 185/223 (82%), Gaps = 6/223 (2%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 ||||| |||| | |||||| |||||||||||||| || ||| | || ||||||||||||| Sbjct: 16308470 gcaagttgggaaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgaca 16308529 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggcacc- 245 |||||||||||| ||||||| | |||||| || |||||||||||||| ||| ||| | Sbjct: 16308530 tccagtacatcagcgacgagatggccagcatccacgccttcctcaccaatctcagcagct 16308589 Query: 246 --ggcgacgaggag---cacgacgcccagatccaggactgggcgaagcagatccgcgaca 300 ||| |||| || |||||||| |||| | |||||||| ||||||| ||||||||| Sbjct: 16308590 ctggcaacgacgacggccacgacgcgcagaccaaggactggatgaagcaggtccgcgaca 16308649 Query: 301 tcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 16308650 tcgcctacgacatggaggactgcgtcgacgacttcgcccaccg 16308692 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||||||||||||||| || ||||||||| | |||||| |||||||||| ||||||| Sbjct: 22875367 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22875426 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctca 231 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22875427 cagtacatcaacgacgagctcgccagcatgcaggccttcctca 22875469 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 22865029 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 22865088 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22865089 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22865148 Query: 229 tca 231 ||| Sbjct: 22865149 tca 22865151 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | |||||||||||||||||| || ||||||||| | || ||| Sbjct: 22769268 ccgtgaagtccctcgtcaacaagctgggcagcctcctcgcgcaggagtacaccctcatct 22769209 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22769208 ccggcgtccacgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 22769149 Query: 229 tca 231 ||| Sbjct: 22769148 tca 22769146 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 27436081 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 27436140 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 230 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27436141 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 27436184 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 22834376 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 22834317 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 242 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 22834316 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 22834263 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||||||| || | ||||||||||| |||||| ||||||||| Sbjct: 27345217 aggactggatgaagcagatccgcgacgtcacctacgacatcgaggactgcatcgacgact 27345276 Query: 334 tcgctcaccg 343 |||| ||||| Sbjct: 27345277 tcgcgcaccg 27345286 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 87 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 146 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 27345018 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 27345077 Query: 147 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 206 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 27345078 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 27345137 Query: 207 ct 208 || Sbjct: 27345138 ct 27345139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||||||||||||| Sbjct: 22865190 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 22865249 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 294 cgcgacatcgcgtacgacatcgaagactgcgtcgacgacttc 335 |||||| |||| ||||||||||| |||||| ||||||||||| Sbjct: 22834207 cgcgacgtcgcctacgacatcgaggactgcatcgacgacttc 22834166 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||| ||||||||| Sbjct: 22769107 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 22769048 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 296 cgacatcgcgtacgacatcgaagactgcgtcgac 329 |||| ||||| |||||||||| |||||||||||| Sbjct: 27244519 cgacctcgcgcacgacatcgaggactgcgtcgac 27244552 Score = 42.1 bits (21), Expect = 1.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||| ||| |||| || ||| | || |||||| |||| |||| Sbjct: 27436234 aggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgcatcgatgact 27436293 Query: 334 tcgctcaccggct 346 | || |||||||| Sbjct: 27436294 ttgcgcaccggct 27436306 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcatgcaggccttcctcacc 233 |||||||||||||||||||| Sbjct: 7182171 gcatgcaggccttcctcacc 7182152
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||||||||||||||| || ||||||||| | |||||| |||||||||| ||||||| Sbjct: 122601 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 122660 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctca 231 ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122661 cagtacatcaacgacgagctcgccagcatgcaggccttcctca 122703 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 112263 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 112322 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112323 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 112382 Query: 229 tca 231 ||| Sbjct: 112383 tca 112385 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | |||||||||||||||||| || ||||||||| | || ||| Sbjct: 16502 ccgtgaagtccctcgtcaacaagctgggcagcctcctcgcgcaggagtacaccctcatct 16443 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16442 ccggcgtccacgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 16383 Query: 229 tca 231 ||| Sbjct: 16382 tca 16380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 81610 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 81551 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 242 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 81550 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 81497 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||||||||||||| Sbjct: 112424 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 112483 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 294 cgcgacatcgcgtacgacatcgaagactgcgtcgacgacttc 335 |||||| |||| ||||||||||| |||||| ||||||||||| Sbjct: 81441 cgcgacgtcgcctacgacatcgaggactgcatcgacgacttc 81400 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||| ||||||||| Sbjct: 16341 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 16282
>dbj|AK065351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020O22, full insert sequence Length = 3275 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 109 ccgtgaagtctctggtgagcaagctgggcagcctcctagcccaggagtacgctctgatcc 168 |||||||||| || || | ||||||||||| |||||| || ||||||||| | || ||| Sbjct: 94 ccgtgaagtcgctcgtcaacaagctgggcaccctcctggcgcaggagtacaccctcatct 153 Query: 169 gtggcgtccgcggcgacatccagtacatcaacgacgagctctgcagcatgcaggccttcc 228 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 154 ccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcc 213 Query: 229 tca 231 ||| Sbjct: 214 tca 216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 273 caggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgac 332 ||||||||| ||||||| | ||||| |||| ||||||||||| ||||||||||||||| Sbjct: 255 caggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 314
>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0047M04, complete sequence Length = 109523 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 60081 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 60140 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 230 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 60141 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 60184 Score = 42.1 bits (21), Expect = 1.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||| ||| |||| || ||| | || |||||| |||| |||| Sbjct: 60234 aggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgcatcgatgact 60293 Query: 334 tcgctcaccggct 346 | || |||||||| Sbjct: 60294 ttgcgcaccggct 60306
>dbj|AK108692.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D06, full insert sequence Length = 2265 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 70 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 129 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 230 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 130 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 173 Score = 42.1 bits (21), Expect = 1.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||| ||| |||| || ||| | || |||||| |||| |||| Sbjct: 223 aggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgcatcgatgact 282 Query: 334 tcgctcaccggct 346 | || |||||||| Sbjct: 283 ttgcgcaccggct 295
>dbj|AK073759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065D18, full insert sequence Length = 3778 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| ||||| || | |||||||| || |||| Sbjct: 439 gcaagctgggcaaccttcttgcccaggagtattctctggtcagcggcgtccgtggtgaca 498 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcctc 230 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 499 tccagtacatcaatgacgagcttgccagcatgcaggccttcctc 542 Score = 42.1 bits (21), Expect = 1.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||| ||| |||| || ||| | || |||||| |||| |||| Sbjct: 592 aggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgcatcgatgact 651 Query: 334 tcgctcaccggct 346 | || |||||||| Sbjct: 652 ttgcgcaccggct 664
>ref|NM_194733.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OSJNBb0004A06.5), mRNA Length = 1023 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 50 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 109 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 229 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 110 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 152
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 1934627 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 1934568 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 229 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1934567 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 25356 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 25297 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 229 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 25296 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 25254
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 1934627 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 1934568 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 229 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1934567 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 127 gcaagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgaca 186 |||||||||||| ||| || ||||||||||| | ||||||| | |||||||| || |||| Sbjct: 1934578 gcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgaca 1934519 Query: 187 tccagtacatcaacgacgagctctgcagcatgcaggccttcct 229 |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1934518 tccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934476
>dbj|AK119331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-B07, full insert sequence Length = 3124 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 129 aagctgggcagcctcctagcccaggagtacgctctgatccgtggcgtccgcggcgacatc 188 ||||| ||||||||||| |||||||||||| | || ||| | ||||| ||| |||| ||| Sbjct: 161 aagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcgagatc 220 Query: 189 cagtacatcaacgacgagctctgcagcatgcaggccttcctcaccaacctcggc 242 ||||||||||| |||||||| ||||||||| ||||||||| |||||||||| Sbjct: 221 cagtacatcaaggacgagctggccagcatgcacgccttcctcctcaacctcggc 274 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 294 cgcgacatcgcgtacgacatcgaagactgcgtcgacgacttc 335 |||||| |||| ||||||||||| |||||| ||||||||||| Sbjct: 330 cgcgacgtcgcctacgacatcgaggactgcatcgacgacttc 371
>dbj|AK064142.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B04, full insert sequence Length = 2789 Score = 89.7 bits (45), Expect = 8e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 259 acgacgcccagatccaggactgggcgaagcagatccgcgacatcgcgtacgacatcgaag 318 ||||||| |||| | |||||||| ||||||| ||||||||||||| |||||||| || | Sbjct: 315 acgacgcgcagaccaaggactggatgaagcaggtccgcgacatcgcctacgacatggagg 374 Query: 319 actgcgtcgacgacttcgctcaccg 343 ||||||||||||||||||| ||||| Sbjct: 375 actgcgtcgacgacttcgcccaccg 399
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||||||| || | ||||||||||| |||||| ||||||||| Sbjct: 71452 aggactggatgaagcagatccgcgacgtcacctacgacatcgaggactgcatcgacgact 71511 Query: 334 tcgctcaccg 343 |||| ||||| Sbjct: 71512 tcgcgcaccg 71521 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 87 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 146 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 71253 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 71312 Query: 147 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 206 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 71313 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 71372 Query: 207 ct 208 || Sbjct: 71373 ct 71374
>dbj|AK103659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H03, full insert sequence Length = 2323 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 274 aggactgggcgaagcagatccgcgacatcgcgtacgacatcgaagactgcgtcgacgact 333 |||||||| |||||||||||||||| || | ||||||||||| |||||| ||||||||| Sbjct: 535 aggactggatgaagcagatccgcgacgtcacctacgacatcgaggactgcatcgacgact 594 Query: 334 tcgctcaccg 343 |||| ||||| Sbjct: 595 tcgcgcaccg 604 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 87 gtggtgggagcttcgcaatccaccgtgaagtctctggtgagcaagctgggcagcctccta 146 |||||||| |||||| | ||||| ||| ||||||| ||| |||||| || || | || Sbjct: 336 gtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactc 395 Query: 147 gcccaggagtacgctctgatccgtggcgtccgcggcgacatccagtacatcaacgacgag 206 |||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||| Sbjct: 396 tcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgag 455 Query: 207 ct 208 || Sbjct: 456 ct 457
>gb|AF151964.1|AF151964 Pseudomonas putida strain KT2440 proline permease (putP) gene, complete cds Length = 3859 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 tctggtgagcaagctgggcagcc 141 ||||||||||||||||||||||| Sbjct: 1753 tctggtgagcaagctgggcagcc 1775
>gb|AF153207.1|AF153207 Pseudomonas putida proline dehydrogenase (putA) and proline permease (putP) genes, complete cds Length = 8660 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 tctggtgagcaagctgggcagcc 141 ||||||||||||||||||||||| Sbjct: 6554 tctggtgagcaagctgggcagcc 6576
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 119 tctggtgagcaagctgggcagcc 141 ||||||||||||||||||||||| Sbjct: 5628716 tctggtgagcaagctgggcagcc 5628694
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 296 cgacatcgcgtacgacatcgaagactgcgtcgac 329 |||| ||||| |||||||||| |||||||||||| Sbjct: 28440 cgacctcgcgcacgacatcgaggactgcgtcgac 28407
>dbj|AK066559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H11, full insert sequence Length = 3799 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 296 cgacatcgcgtacgacatcgaagactgcgtcgac 329 |||| ||||| |||||||||| |||||||||||| Sbjct: 295 cgacctcgcgcacgacatcgaggactgcgtcgac 328
>ref|XM_482053.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2901 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 acgacatcgaagactgcgtcgacga 331 ||||||||||||||||||| ||||| Sbjct: 212 acgacatcgaagactgcgtggacga 236
>gb|AC102101.7| Mus musculus chromosome 15, clone RP23-74N15, complete sequence Length = 191261 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cagcctcctagcccaggagta 157 ||||||||||||||||||||| Sbjct: 20725 cagcctcctagcccaggagta 20705
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 acgacatcgaagactgcgtcgacga 331 ||||||||||||||||||| ||||| Sbjct: 17471439 acgacatcgaagactgcgtggacga 17471415
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 acgacatcgaagactgcgtcgacga 331 ||||||||||||||||||| ||||| Sbjct: 82284 acgacatcgaagactgcgtggacga 82260
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 tggtgagcaagctgggcagcc 141 ||||||||||||||||||||| Sbjct: 5304752 tggtgagcaagctgggcagcc 5304732
>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence Length = 218949 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cagcctcctagcccaggagta 157 ||||||||||||||||||||| Sbjct: 218304 cagcctcctagcccaggagta 218284
>gb|AY850006.1| Volvox carteri f. nagariensis arsenite-resistance protein mRNA, complete cds Length = 2716 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cggcaccggcgacgaggagc 258 |||||||||||||||||||| Sbjct: 1080 cggcaccggcgacgaggagc 1099
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1033094 aatccaccgtgaagtctctg 1033113
>ref|NM_017332.1| Rattus norvegicus fatty acid synthase (Fasn), mRNA Length = 9136 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 2466 cttcctcaccaacctcggca 2485
>ref|NM_183904.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2478 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 292 tccgcgacatcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||||||| |||| ||||||||||| ||||| ||||| |||||| ||||| Sbjct: 212 tccgcgacctcgcctacgacatcgaggactggatcgacctcttcgcccaccg 263
>ref|NM_186249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 171 ggcgtccgcggcgacatccagtacatcaacgacgag 206 ||||||||||||||| | |||| |||||| |||||| Sbjct: 97 ggcgtccgcggcgacgtgcagttcatcaaggacgag 132
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcatgcaggccttcctcacc 233 |||||||||||||||||||| Sbjct: 66355 gcatgcaggccttcctcacc 66374
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcatgcaggccttcctcacc 233 |||||||||||||||||||| Sbjct: 29420 gcatgcaggccttcctcacc 29401
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cgagatcgccgtgaagatcg 453 |||||||||||||||||||| Sbjct: 1796083 cgagatcgccgtgaagatcg 1796064
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cgagatcgccgtgaagatcg 453 |||||||||||||||||||| Sbjct: 3040072 cgagatcgccgtgaagatcg 3040053
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tcaaactcgaaaatggatct 85 |||||||||||||||||||| Sbjct: 16759852 tcaaactcgaaaatggatct 16759833 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tctctggtgagcaagctggg 136 |||||||||||||||||||| Sbjct: 2773502 tctctggtgagcaagctggg 2773483
>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence Length = 173054 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 agctgggcagcctcctagcc 149 |||||||||||||||||||| Sbjct: 143398 agctgggcagcctcctagcc 143417
>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 agctgggcagcctcctagcc 149 |||||||||||||||||||| Sbjct: 137206 agctgggcagcctcctagcc 137187
>emb|X62888.1|RNFASRNA R.norvegicus FAS mRNA for fatty acid synthase Length = 9143 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 2471 cttcctcaccaacctcggca 2490
>emb|X62889.1|RNFASDNA R.norvegicus FAS gene for fatty acid synthase Length = 23713 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 12639 cttcctcaccaacctcggca 12658
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tcaaactcgaaaatggatct 85 |||||||||||||||||||| Sbjct: 110645 tcaaactcgaaaatggatct 110626
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tggatctggtggtgggagct 98 |||||||||||||||||||| Sbjct: 39659 tggatctggtggtgggagct 39640
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1043905 aatccaccgtgaagtctctg 1043924
>ref|XM_786492.1| PREDICTED: Strongylocentrotus purpuratus similar to fatty acid synthase (LOC586721), mRNA Length = 7092 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 2067 cttcctcaccaacctcggca 2086
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gccgtgaagatcgccgagctcaag 464 |||| ||||||||||||||||||| Sbjct: 16676 gccgagaagatcgccgagctcaag 16699
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gccgtgaagatcgccgagctcaag 464 |||| ||||||||||||||||||| Sbjct: 273456 gccgagaagatcgccgagctcaag 273479
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gccgtgaagatcgccgagctcaag 464 |||| ||||||||||||||||||| Sbjct: 207113 gccgagaagatcgccgagctcaag 207136
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cgagatcgccgtgaagatcg 453 |||||||||||||||||||| Sbjct: 2770035 cgagatcgccgtgaagatcg 2770016
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1045104 aatccaccgtgaagtctctg 1045123
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cggcgacgaggagcacgacg 264 |||||||||||||||||||| Sbjct: 1696289 cggcgacgaggagcacgacg 1696308
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 171 ggcgtccgcggcgacatccagtacatcaacgacgag 206 ||||||||||||||| | |||| |||||| |||||| Sbjct: 2185849 ggcgtccgcggcgacgtgcagttcatcaaggacgag 2185814
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tcaaactcgaaaatggatct 85 |||||||||||||||||||| Sbjct: 16753485 tcaaactcgaaaatggatct 16753466 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tctctggtgagcaagctggg 136 |||||||||||||||||||| Sbjct: 2773612 tctctggtgagcaagctggg 2773593
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 292 tccgcgacatcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||||||| |||| ||||||||||| ||||| ||||| |||||| ||||| Sbjct: 13127453 tccgcgacctcgcctacgacatcgaggactggatcgacctcttcgcccaccg 13127402
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1036550 aatccaccgtgaagtctctg 1036569
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tctctggtgagcaagctggg 136 |||||||||||||||||||| Sbjct: 45458 tctctggtgagcaagctggg 45439
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tctctggtgagcaagctggg 136 |||||||||||||||||||| Sbjct: 118421 tctctggtgagcaagctggg 118402
>gb|AF033217.1|AF033217 Anopheles farauti 6 internal transcribed spacer 2, complete sequence Length = 565 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cggcgacgaggagcacgacg 264 |||||||||||||||||||| Sbjct: 523 cggcgacgaggagcacgacg 542
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 292 tccgcgacatcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||||||| |||| ||||||||||| ||||| ||||| |||||| ||||| Sbjct: 103174 tccgcgacctcgcctacgacatcgaggactggatcgacctcttcgcccaccg 103123
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 171 ggcgtccgcggcgacatccagtacatcaacgacgag 206 ||||||||||||||| | |||| |||||| |||||| Sbjct: 53751 ggcgtccgcggcgacgtgcagttcatcaaggacgag 53716
>dbj|AK100802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K14, full insert sequence Length = 2509 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcatgcaggccttcctcacc 233 |||||||||||||||||||| Sbjct: 1713 gcatgcaggccttcctcacc 1732
>dbj|AK068195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146B15, full insert sequence Length = 2761 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 292 tccgcgacatcgcgtacgacatcgaagactgcgtcgacgacttcgctcaccg 343 |||||||| |||| ||||||||||| ||||| ||||| |||||| ||||| Sbjct: 369 tccgcgacctcgcctacgacatcgaggactggatcgacctcttcgcccaccg 420
>emb|BX510324.7| Zebrafish DNA sequence from clone DKEY-18C8 in linkage group 20, complete sequence Length = 164369 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gtaaatatccatcatcatcccatc 35 |||||||||||||||| ||||||| Sbjct: 131368 gtaaatatccatcatcttcccatc 131345
>emb|X13415.1|RNFAS Rat mRNA for fatty acid synthase (EC 2.3.1.85) Length = 8936 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 2264 cttcctcaccaacctcggca 2283
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 cgagatcgccgtgaagatcg 453 |||||||||||||||||||| Sbjct: 2109779 cgagatcgccgtgaagatcg 2109798
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1308630 aatccaccgtgaagtctctg 1308649
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tccatcatcatcccatccat 38 |||||||||||||||||||| Sbjct: 2824539 tccatcatcatcccatccat 2824558
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1223813 aatccaccgtgaagtctctg 1223832
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 907337 aatccaccgtgaagtctctg 907356
>emb|AL845530.7| Mouse DNA sequence from clone RP23-281B6 on chromosome 2, complete sequence Length = 189809 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gagctctgcagcatgcaggc 223 |||||||||||||||||||| Sbjct: 112936 gagctctgcagcatgcaggc 112955
>gb|M76767.1|RATFASA Rattus norvegicus fatty acid synthase mRNA, complete cds Length = 9136 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 2466 cttcctcaccaacctcggca 2485
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 2235633 aatccaccgtgaagtctctg 2235614
>gb|M84761.1|RATFASYN Rat fatty acid synthase gene, complete cds Length = 18171 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cttcctcaccaacctcggca 243 |||||||||||||||||||| Sbjct: 7615 cttcctcaccaacctcggca 7634
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatccaccgtgaagtctctg 122 |||||||||||||||||||| Sbjct: 1064325 aatccaccgtgaagtctctg 1064344 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,721,143 Number of Sequences: 3902068 Number of extensions: 2721143 Number of successful extensions: 52799 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51356 Number of HSP's gapped (non-prelim): 1436 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
