Clone Name | bastl42b10 |
---|---|
Clone Library Name | barley_pub |
>gb|AF104924.2|AF104924 Zea mays unconventional myosin heavy chain (MYO1) mRNA, complete cds Length = 5375 Score = 454 bits (229), Expect = e-124 Identities = 356/397 (89%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 34 caaagtcttccaaattttcatctattgggtcacgttttaagctgcaacttcagtctctca 93 |||||||||| ||||||||||| ||||| |||||||||||||| |||||||| || |||| Sbjct: 2161 caaagtcttcaaaattttcatccattggatcacgttttaagcttcaacttcaatccctca 2220 Query: 94 tggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctcc 153 |||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2221 tggaaactttgagctctaccgaaccccactatattagatgtgtgaagccaaataatctcc 2280 Query: 154 tcaagccagccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgttc 213 | |||||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||| Sbjct: 2281 ttaagccagctatttttgagaatacaaatgttatacaacaactaagatgtggaggtgttc 2340 Query: 214 ttgaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttg 273 | |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 2341 tcgaagctatcaggatcagctgtgctggatatcccacaagaaaaacattttatgaatttg 2400 Query: 274 ttaatcgctttggtgttcttggccctgaacttctagaaggaagtaacgacgataagattg 333 | ||||| |||||||| |||| |||||| || ||||||| || || || |||||||||| Sbjct: 2401 tcaatcgttttggtgtccttgctcctgaagttttagaagggagcaatgatgataagattg 2460 Query: 334 catgccaaaagattctggaaaaaatgaagttggagaactaccagataggaaaaacaaagg 393 | |||||||||||| ||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 2461 cgtgccaaaagattttggaaaaaatgggtctggagaattaccagattggaaaaacaaagg 2520 Query: 394 tatttctgagagctggaca-atggctgatttggatgc 429 | ||||| ||||||||||| ||||||||||||||||| Sbjct: 2521 tgtttctaagagctggacagatggctgatttggatgc 2557
>gb|AY109476.1| Zea mays CL1535_1 mRNA sequence Length = 5375 Score = 329 bits (166), Expect = 4e-87 Identities = 335/397 (84%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 34 caaagtcttccaaattttcatctattgggtcacgttttaagctgcaacttcagtctctca 93 |||||||||| ||||||||||| ||||| |||||||||||||| |||||||| || |||| Sbjct: 2161 caaagtcttcaaaattttcatccattggatcacgttttaagcttcaacttcaatccctca 2220 Query: 94 tggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctcc 153 |||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2221 tggaaactttgagctctaccgaaccccactatattagatgtgtgaagccaaataatctcc 2280 Query: 154 tcaagccagccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgttc 213 | |||||||| | ||||| ||||| ||||||||||||||| ||||||||||||||| Sbjct: 2281 ttaagccagctannnnngagaatacaaatgttatacaacaactaagatgtggaggtgttc 2340 Query: 214 ttgaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttg 273 | |||||||||||||| |||||||||||||| |||||||| |||| |||||||||| Sbjct: 2341 tcgaagctatcaggatcagctgtgctggatatcccacaagnnnnncattttatgaatttg 2400 Query: 274 ttaatcgctttggtgttcttggccctgaacttctagaaggaagtaacgacgataagattg 333 | ||||| |||||||| |||| |||||| || ||||||| || || || |||||||||| Sbjct: 2401 tcaatcgttttggtgtccttgctcctgaagttttagaagggagcaatgatgataagattg 2460 Query: 334 catgccaaaagattctggaaaaaatgaagttggagaactaccagataggaaaaacaaagg 393 | |||||||||||| ||| || ||||||| |||||||| || |||||| Sbjct: 2461 cgtgccaaaagattttggnnnnnntgggtctggagaattaccagattggnnnnncaaagg 2520 Query: 394 tatttctgagagctggaca-atggctgatttggatgc 429 | ||||| ||||||||||| ||||||||||||||||| Sbjct: 2521 tgtttctaagagctggacagatggctgatttggatgc 2557
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 204 bits (103), Expect = 2e-49 Identities = 127/135 (94%) Strand = Plus / Plus Query: 73 agctgcaacttcagtctctcatggagaccttgagctctactgaaccccattatattagat 132 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 89316 agctgcaacttcaatctctcatggagaccttgagctcaacagaaccccattatattagat 89375 Query: 133 gtgtgaagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaac 192 |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 89376 gtgtgaagccaaataacctcctaaagccagccatttttgagaacacaaatgttatacaac 89435 Query: 193 aactacgatgtggag 207 |||| ||||| |||| Sbjct: 89436 aactgcgatgcggag 89450 Score = 170 bits (86), Expect = 2e-39 Identities = 104/110 (94%) Strand = Plus / Plus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaaacattctat 266 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 89518 ggtgttcttgaagctatcaggatcagctgtgctggatatcccacaaggaaaacattctat 89577 Query: 267 gaatttgttaatcgctttggtgttcttggccctgaacttctagaaggaag 316 |||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 89578 gaatttgttaatcgctttggtgttcttgctcctgaagttctagaaggaag 89627 Score = 79.8 bits (40), Expect = 7e-12 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 89962 cagatcggaaaaacaaaggtatttctgagagctggacagatggctgatctggatgc 90017 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 324 gataagattgcatgccaaaagattctggaaaaaatgaagttggagaactaccag 377 ||||| ||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 89735 gataaaattgcatgccagaagattttggaaaaaatggggctggagaactaccag 89788 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 5 tttattcccttcactccctgaagaaccatcaaagtcttccaaattttcatctattgggtc 64 |||||| ||| ||||||||||||| | |||| ||||| ||||||||||| || ||||| Sbjct: 88553 tttatttcctgcactccctgaagagactgcaaaatcttcaaaattttcatcaatcgggtc 88612 Query: 65 acgttttaagctgcaactt 83 |||||| ||| || ||||| Sbjct: 88613 acgtttcaaggtgaaactt 88631
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 73 agctgcaacttcagtctctcatggagaccttgagctctactgaaccccattatattagat 132 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 27089575 agctgcaacttcaatctctcatggagaccttgagctcaacagaaccccattatattagat 27089516 Query: 133 gtgtgaagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaac 192 |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 27089515 gtgtgaagccaaataacctcctaaagccagccatttttgagaacacaaatgttatacaac 27089456 Query: 193 aactacgatgtggag 207 |||| ||||| |||| Sbjct: 27089455 aactgcgatgcggag 27089441 Score = 170 bits (86), Expect = 2e-39 Identities = 104/110 (94%) Strand = Plus / Minus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaaacattctat 266 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 27089373 ggtgttcttgaagctatcaggatcagctgtgctggatatcccacaaggaaaacattctat 27089314 Query: 267 gaatttgttaatcgctttggtgttcttggccctgaacttctagaaggaag 316 |||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 27089313 gaatttgttaatcgctttggtgttcttgctcctgaagttctagaaggaag 27089264 Score = 79.8 bits (40), Expect = 7e-12 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 27088929 cagatcggaaaaacaaaggtatttctgagagctggacagatggctgatctggatgc 27088874 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 324 gataagattgcatgccaaaagattctggaaaaaatgaagttggagaactaccag 377 ||||| ||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 27089156 gataaaattgcatgccagaagattttggaaaaaatggggctggagaactaccag 27089103 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 30476545 cagataggaaaaacaaaggtattcctaagagctgg 30476579 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 5 tttattcccttcactccctgaagaaccatcaaagtcttccaaattttcatctattgggtc 64 |||||| ||| ||||||||||||| | |||| ||||| ||||||||||| || ||||| Sbjct: 27090338 tttatttcctgcactccctgaagagactgcaaaatcttcaaaattttcatcaatcgggtc 27090279 Query: 65 acgttttaagctgcaactt 83 |||||| ||| || ||||| Sbjct: 27090278 acgtttcaaggtgaaactt 27090260
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 73 agctgcaacttcagtctctcatggagaccttgagctctactgaaccccattatattagat 132 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 27180898 agctgcaacttcaatctctcatggagaccttgagctcaacagaaccccattatattagat 27180839 Query: 133 gtgtgaagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaac 192 |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 27180838 gtgtgaagccaaataacctcctaaagccagccatttttgagaacacaaatgttatacaac 27180779 Query: 193 aactacgatgtggag 207 |||| ||||| |||| Sbjct: 27180778 aactgcgatgcggag 27180764 Score = 170 bits (86), Expect = 2e-39 Identities = 104/110 (94%) Strand = Plus / Minus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaaacattctat 266 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 27180696 ggtgttcttgaagctatcaggatcagctgtgctggatatcccacaaggaaaacattctat 27180637 Query: 267 gaatttgttaatcgctttggtgttcttggccctgaacttctagaaggaag 316 |||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 27180636 gaatttgttaatcgctttggtgttcttgctcctgaagttctagaaggaag 27180587 Score = 79.8 bits (40), Expect = 7e-12 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 27180252 cagatcggaaaaacaaaggtatttctgagagctggacagatggctgatctggatgc 27180197 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 324 gataagattgcatgccaaaagattctggaaaaaatgaagttggagaactaccag 377 ||||| ||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 27180479 gataaaattgcatgccagaagattttggaaaaaatggggctggagaactaccag 27180426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 30567967 cagataggaaaaacaaaggtattcctaagagctgg 30568001 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 5 tttattcccttcactccctgaagaaccatcaaagtcttccaaattttcatctattgggtc 64 |||||| ||| ||||||||||||| | |||| ||||| ||||||||||| || ||||| Sbjct: 27181661 tttatttcctgcactccctgaagagactgcaaaatcttcaaaattttcatcaatcgggtc 27181602 Query: 65 acgttttaagctgcaactt 83 |||||| ||| || ||||| Sbjct: 27181601 acgtttcaaggtgaaactt 27181583
>gb|U94782.1|U94782 Helianthus annuus unconventional myosin (hamy2) mRNA, partial cds Length = 4059 Score = 141 bits (71), Expect = 2e-30 Identities = 203/247 (82%) Strand = Plus / Plus Query: 4 gtttattcccttcactccctgaagaaccatcaaagtcttccaaattttcatctattgggt 63 ||||||| ||| | || |||| |||| |||| || |||||||||||||| || ||||| | Sbjct: 2039 gtttatttcctccgcttcctgtagaatcatccaaatcttccaaattttcctccattggtt 2098 Query: 64 cacgttttaagctgcaacttcagtctctcatggagaccttgagctctactgaaccccatt 123 | || |||||| |||||||||||||||| ||||| || |||||| | || ||||| |||| Sbjct: 2099 cgcgatttaagttgcaacttcagtctctaatggaaacgttgagcacaaccgaacctcatt 2158 Query: 124 atattagatgtgtgaagccaaataatctcctcaagccagccatttttgagaacacaaacg 183 | ||| |||||||||| || || ||| | |||||||| || |||||||| ||| ||| Sbjct: 2159 acattcgatgtgtgaaaccgaacaatgttctcaagcctgctatttttgaaaacctaaata 2218 Query: 184 ttatacaacaactacgatgtggaggtgttcttgaagctatcaggataagctgtgctggat 243 |||| |||||| |||||||||| ||||||||||| || |||||||| || |||||||| | Sbjct: 2219 ttatccaacaattacgatgtggtggtgttcttgaggcaatcaggatcagttgtgctggtt 2278 Query: 244 accccac 250 | ||||| Sbjct: 2279 atcccac 2285
>gb|U94785.1|U94785 Helianthus annuus unconventional myosin (hamy5) mRNA, complete cds Length = 5228 Score = 119 bits (60), Expect = 8e-24 Identities = 174/212 (82%) Strand = Plus / Plus Query: 39 tcttccaaattttcatctattgggtcacgttttaagctgcaacttcagtctctcatggag 98 ||||| |||||||| || ||||| || || ||||||||||||||||||||| | ||||| Sbjct: 2000 tcttcaaaattttcctccattggttctcgatttaagctgcaacttcagtctttaatggaa 2059 Query: 99 accttgagctctactgaaccccattatattagatgtgtgaagccaaataatctcctcaag 158 |||||||| | || ||||| || || |||||||| |||||||| || ||| | || ||| Sbjct: 2060 accttgagtacaacagaacctcactacattagatgcgtgaagccgaacaatgttcttaag 2119 Query: 159 ccagccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgttcttgaa 218 || || |||||||| ||| |||| |||| |||||| |||||||||| ||||| ||||| Sbjct: 2120 cctgctatttttgaaaacttaaacattatccaacaattacgatgtggtggtgtacttgag 2179 Query: 219 gctatcaggataagctgtgctggataccccac 250 || |||||||| || |||||||| || ||||| Sbjct: 2180 gcgatcaggatcagttgtgctggttatcccac 2211
>ref|XM_475779.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 7281 Score = 105 bits (53), Expect = 1e-19 Identities = 137/165 (83%) Strand = Plus / Plus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctc 152 |||||||| || || ||||| ||||| ||||||||||||||| | ||||| |||||||| Sbjct: 2722 atggagactttaagttctacagaacctcattatattagatgtattaagcccaataatctt 2781 Query: 153 ctcaagccagccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgtt 212 || ||||| || | |||||||||| | || ||| |||| ||||| |||||| |||||| Sbjct: 2782 cttaagcctgctacttttgagaacgccaatgttttacatcaacttcgatgttcgggtgtt 2841 Query: 213 cttgaagctatcaggataagctgtgctggataccccacaagaaaa 257 ||||||||||| | || || |||||||||||||| ||||||||| Sbjct: 2842 cttgaagctattcgcatcagttgtgctggataccctacaagaaaa 2886 Score = 40.1 bits (20), Expect = 6.0 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||| ||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 3004 cagattggaagaactaaggtgtttctgagagccggtcagatggctgaattggatgc 3059
>ref|NM_122056.3| Arabidopsis thaliana XIK; motor/ protein binding AT5G20490 (XIK) mRNA, complete cds Length = 5079 Score = 103 bits (52), Expect = 5e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 43 ccaaattttcatctattgggtcacgttttaagctgcaacttcagtctctcatggagacct 102 |||||||||| || || |||||||| |||||||| |||||||| ||| | |||||||| Sbjct: 1841 ccaaattttcttccatcgggtcacgctttaagcttcaacttcaatctttgatggagacac 1900 Query: 103 tgagctctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagccag 162 |||| || || ||||| || ||||| ||||||||||||||||||||| | || ||||| | Sbjct: 1901 tgagttcaacagaacctcactatatcagatgtgtgaagccaaataatgtacttaagcctg 1960 Query: 163 ccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgttcttgaagcta 222 | || || ||||| ||||| || |||||| |||| ||||| |||||||| ||||||| Sbjct: 1961 ctatcttcgagaatgtgaacgtaattcaacaattacggtgtggtggtgttctggaagcta 2020 Query: 223 tcaggataagctgtgc 238 | || || |||||||| Sbjct: 2021 ttagaatcagctgtgc 2036
>ref|NM_191733.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4602 Score = 89.7 bits (45), Expect = 7e-15 Identities = 132/161 (81%) Strand = Plus / Plus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctc 152 |||||||| ||||||||||| || || ||||| ||||||||||| || ||||||| | | Sbjct: 1849 atggagacgttgagctctacagagcctcattacattagatgtgtaaaaccaaatagtgtt 1908 Query: 153 ctcaagccagccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgtt 212 || || || || || ||||||||||| || ||| | || ||||| |||||| |||||| Sbjct: 1909 cttaaacctgctatatttgagaacacgaatgttctgcagcaacttcgatgttcgggtgtt 1968 Query: 213 cttgaagctatcaggataagctgtgctggataccccacaag 253 |||||||| || || || |||||||||||||| |||||||| Sbjct: 1969 cttgaagcgattagaatcagctgtgctggatatcccacaag 2009
>dbj|AB180675.1| Nicotiana tabacum Ntmy170 mRNA for myosin XI, complete cds Length = 5144 Score = 75.8 bits (38), Expect = 1e-10 Identities = 182/230 (79%) Strand = Plus / Plus Query: 21 cctgaagaaccatcaaagtcttccaaattttcatctattgggtcacgttttaagctgcaa 80 ||||||||| ||||||| || |||||||| || || |||||||||||||| ||||| ||| Sbjct: 1871 cctgaagaatcatcaaaatcgtccaaattctcctccattgggtcacgtttcaagctacaa 1930 Query: 81 cttcagtctctcatggagaccttgagctctactgaaccccattatattagatgtgtgaag 140 || || ||| | ||||| || || || || || || || || || || ||||| |||||| Sbjct: 1931 ctgcaatctttaatggaaacattaagttcaacagagcctcactacatcagatgcgtgaag 1990 Query: 141 ccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaacaactacga 200 || |||||| |||| ||||| ||||| ||||| ||||| || || ||| | ||| Sbjct: 1991 cctaataatgtccttaagccttgtattttcgagaatgtgaacgtgatccagcaattgcga 2050 Query: 201 tgtggaggtgttcttgaagctatcaggataagctgtgctggataccccac 250 ||||| |||||| | |||||||| || || |||||||||||||| ||||| Sbjct: 2051 tgtggtggtgttttagaagctattagaatcagctgtgctggatatcccac 2100
>ref|XM_466107.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4065 Score = 73.8 bits (37), Expect = 4e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 138 aagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaacaacta 197 |||||||||||| | ||||||||||| ||||||||||||| || ||| | || ||||| Sbjct: 1459 aagccaaataatgttctcaagccagcaatttttgagaacagcaatgttctccagcaactt 1518 Query: 198 cgatgtggaggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaa 257 ||||||||||| || || || || || || |||||||| || ||||| ||||||| | Sbjct: 1519 cgatgtggaggagtgctagaggcaataagaataagctgcctagggtacccaacaagaaga 1578 Query: 258 acattctatgaatttgttaatcgctttggtgtt 290 ||||| |||| |||||| |||| ||||||||| Sbjct: 1579 acatttgatgagtttgttgatcgttttggtgtt 1611
>gb|AF338254.1|AF338254 Petroselinum crispum myosin subfamily XI heavy chain (PCM3) mRNA, complete cds Length = 4935 Score = 73.8 bits (37), Expect = 4e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 138 aagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaacaacta 197 ||||| |||||||| | |||||||| || ||||||||| || ||| ||||||||||| Sbjct: 2022 aagcctaataatcttttgaagccagctatatttgagaaccacaatgttttacaacaacta 2081 Query: 198 cgatgtggaggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaa 257 || ||||| || || | || || ||||| ||||||||||||||||| || || |||||| Sbjct: 2082 cgttgtgggggagtcatggaggcaatcagaataagctgtgctggatatcctactagaaaa 2141 Query: 258 acattctatgaatttgt 274 | |||||||||||||| Sbjct: 2142 ccgttctatgaatttgt 2158
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 69.9 bits (35), Expect = 7e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctc 152 |||||||| || || ||||| ||||| ||||||||||||||| | ||||| |||||||| Sbjct: 1372 atggagactttaagttctacagaacctcattatattagatgtattaagcccaataatctt 1431 Query: 153 ctcaagccagccatttttgagaacacaaacgttatacaacaactacgatgt 203 || ||||| || | |||||||||| | || ||| |||| ||||| |||||| Sbjct: 1432 cttaagcctgctacttttgagaacgccaatgttttacatcaacttcgatgt 1482 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaa 257 ||||||||||||||||| | || || |||||||||||||| ||||||||| Sbjct: 1564 ggtgttcttgaagctattcgcatcagttgtgctggataccctacaagaaaa 1614 Score = 40.1 bits (20), Expect = 6.0 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||| ||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 2233 cagattggaagaactaaggtgtttctgagagccggtcagatggctgaattggatgc 2288
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 69.9 bits (35), Expect = 7e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctc 152 |||||||| || || ||||| ||||| ||||||||||||||| | ||||| |||||||| Sbjct: 132588 atggagactttaagttctacagaacctcattatattagatgtattaagcccaataatctt 132647 Query: 153 ctcaagccagccatttttgagaacacaaacgttatacaacaactacgatgt 203 || ||||| || | |||||||||| | || ||| |||| ||||| |||||| Sbjct: 132648 cttaagcctgctacttttgagaacgccaatgttttacatcaacttcgatgt 132698 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaa 257 ||||||||||||||||| | || || |||||||||||||| ||||||||| Sbjct: 132780 ggtgttcttgaagctattcgcatcagttgtgctggataccctacaagaaaa 132830 Score = 40.1 bits (20), Expect = 6.0 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||| ||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 133449 cagattggaagaactaaggtgtttctgagagccggtcagatggctgaattggatgc 133504
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 7e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaataatctc 152 |||||||| || || ||||| ||||| ||||||||||||||| | ||||| |||||||| Sbjct: 26487897 atggagactttaagttctacagaacctcattatattagatgtattaagcccaataatctt 26487956 Query: 153 ctcaagccagccatttttgagaacacaaacgttatacaacaactacgatgt 203 || ||||| || | |||||||||| | || ||| |||| ||||| |||||| Sbjct: 26487957 cttaagcctgctacttttgagaacgccaatgttttacatcaacttcgatgt 26488007 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaa 257 ||||||||||||||||| | || || |||||||||||||| ||||||||| Sbjct: 26488089 ggtgttcttgaagctattcgcatcagttgtgctggataccctacaagaaaa 26488139 Score = 40.1 bits (20), Expect = 6.0 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctggaca-atggctgatttggatgc 429 ||||| |||| ||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 26488758 cagattggaagaactaaggtgtttctgagagccggtcagatggctgaattggatgc 26488813
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 138 aagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaacaacta 197 |||||||||||| | ||||||||||| ||||||||||||| || ||| | || ||||| Sbjct: 20397419 aagccaaataatgttctcaagccagcaatttttgagaacagcaatgttctccagcaactt 20397478 Query: 198 cgatgtggag 207 |||||||||| Sbjct: 20397479 cgatgtggag 20397488 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgtt 275 ||||| |||||||||||||||||||| || || || |||| ||| |||||||| || | Sbjct: 35050938 gaagcaatcaggataagctgtgctgggtatccaactagaagaactttctatgagttcata 35050997 Query: 276 aatcgctttggtgttcttg 294 ||||||||||| |||||| Sbjct: 35050998 gatcgctttggtattcttg 35051016
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 138 aagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaacaacta 197 |||||||||||| | ||||||||||| ||||||||||||| || ||| | || ||||| Sbjct: 39843 aagccaaataatgttctcaagccagcaatttttgagaacagcaatgttctccagcaactt 39902 Query: 198 cgatgtggag 207 |||||||||| Sbjct: 39903 cgatgtggag 39912
>ref|NM_128748.2| Arabidopsis thaliana XIF AT2G31900 (XIF) mRNA, complete cds Length = 4671 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 42 tccaaattttcatctattgggtcacgttttaagctgcaacttcagtctctcatggagacc 101 |||||||||||||| || ||| | ||||| |||| ||||| || |||| |||||||| Sbjct: 1798 tccaaattttcatccatagggacccgtttcaagcaacaactccaagctctaatggagacg 1857 Query: 102 ttgagctctactgaaccccattatattagatgtgtgaagccaaat 146 ||| | | || || ||||||||||||||||||||||| |||||| Sbjct: 1858 ctgaacacaacagagccccattatattagatgtgtgaaaccaaat 1902 Score = 46.1 bits (23), Expect = 0.097 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 371 ctaccagataggaaaaacaaaggtatttctgagagctggaca-atggctga 420 |||||||||||| ||||||||| ||||||| || || ||||| |||||||| Sbjct: 2124 ctaccagatagggaaaacaaagatatttcttagggccggacagatggctga 2174
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 73 agctgcaacttcagtctctcatggagaccttgagctctactgaaccccattatattagat 132 |||| |||||||| ||| | |||||||| |||| || || ||||| || ||||| |||| Sbjct: 35395 agcttcaacttcaatctttgatggagacactgagttcaacagaacctcactatatcagat 35336 Query: 133 gtgtgaagccaaataat 149 ||||||||||||||||| Sbjct: 35335 gtgtgaagccaaataat 35319
>gb|AF147739.1|AF147739 Zea mays myosin XI (M2) mRNA, partial cds Length = 4313 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 156 aagccagccatttttgagaacacaaacgttatacaacaactacgatgtggaggtgttctt 215 ||||| || |||||||||||| |||||| | || ||||| |||||||||| ||| | Sbjct: 1426 aagcctgcaatttttgagaaccagaacgttcttcagcaactcagatgtggaggagttatg 1485 Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaattt 272 || || || ||||| || ||||||||||| || || |||| |||||||||||||||| Sbjct: 1486 gaggcgattaggatcagttgtgctggatatccgaccagaagaacattctatgaattt 1542
>ref|NM_100746.2| Arabidopsis thaliana XIC; motor/ protein binding AT1G08730 (XIC) mRNA, complete cds Length = 4687 Score = 54.0 bits (27), Expect = 4e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 9 ttcccttcactccctgaagaaccatcaaagtcttccaaattttcatctattgggtcacgt 68 |||||| ||||||| |||||| |||| || || || || |||||||| ||||| || || Sbjct: 1789 ttccctccactcccagaagaaacatctaaatcgtcaaagttttcatccattggttctcgc 1848 Query: 69 tttaagctgcaacttcagtctctcatggagaccttgagctctactgaaccccattatatt 128 |||||||||||||| ||| || ||||| || || | | || || || ||||| || Sbjct: 1849 tttaagctgcaactccagcaactgatggaaacattaaattgcaccgagcctcattacatc 1908 Query: 129 agatgtgtgaagccaaataatctcctcaagccagccatttttgagaa 175 |||||||||||||| || ||||| || ||||| ||||| |||||||| Sbjct: 1909 agatgtgtgaagcctaacaatcttctaaagcctgccatatttgagaa 1955
>ref|XM_468404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4587 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgtt 275 ||||| |||||||||||||||||||| || || || |||| ||| |||||||| || | Sbjct: 2026 gaagcaatcaggataagctgtgctgggtatccaactagaagaactttctatgagttcata 2085 Query: 276 aatcgctttggtgttcttg 294 ||||||||||| |||||| Sbjct: 2086 gatcgctttggtattcttg 2104
>ref|XM_469738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4644 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 2128 cagataggaaaaacaaaggtattcctaagagctgg 2162
>gb|AY374517.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E3 protein (MyoXIE3) mRNA, complete cds Length = 5307 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 2128 cagataggaaaaacaaaggtattcctaagagctgg 2162
>gb|AY374516.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E2 protein (MyoXIE2) mRNA, complete cds Length = 5348 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 2128 cagataggaaaaacaaaggtattcctaagagctgg 2162
>gb|AY374515.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E1 protein (MyoXIE1) mRNA, complete cds Length = 5139 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 2128 cagataggaaaaacaaaggtattcctaagagctgg 2162
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 470 cagataggaaaaacaaaggtattcctaagagctgg 436
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||||||||||||||||||||| || |||||||| Sbjct: 8118 cagataggaaaaacaaaggtattcctaagagctgg 8152
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaata 147 |||||||| ||||||||||| || || ||||| ||||||||||| || ||||||| Sbjct: 29660540 atggagacgttgagctctacagagcctcattacattagatgtgtaaaaccaaata 29660486 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaag 253 |||||||||||||| || || || |||||||||||||| |||||||| Sbjct: 29660341 ggtgttcttgaagcgattagaatcagctgtgctggatatcccacaag 29660295
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 93 atggagaccttgagctctactgaaccccattatattagatgtgtgaagccaaata 147 |||||||| ||||||||||| || || ||||| ||||||||||| || ||||||| Sbjct: 130360 atggagacgttgagctctacagagcctcattacattagatgtgtaaaaccaaata 130306 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 207 ggtgttcttgaagctatcaggataagctgtgctggataccccacaag 253 |||||||||||||| || || || |||||||||||||| |||||||| Sbjct: 130161 ggtgttcttgaagcgattagaatcagctgtgctggatatcccacaag 130115
>dbj|AB185288.1| Adiantum capillus-veneris myo11-2 mRNA for myosin class 11-2, complete cds Length = 4620 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 201 tgtggaggtgttcttgaagctatcaggataagctgtgctggataccc 247 ||||||||||||||||||||| | | |||||||||||||| ||||| Sbjct: 1978 tgtggaggtgttcttgaagctgtgcgcataagctgtgctggctaccc 2024
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgtt 275 ||||| |||||||||||||||||||| || || || |||| ||| |||||||| || | Sbjct: 111279 gaagcaatcaggataagctgtgctgggtatccaactagaagaactttctatgagttcata 111338 Query: 276 aatcgctttggtgttcttg 294 ||||||||||| |||||| Sbjct: 111339 gatcgctttggtattcttg 111357
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgtt 275 ||||| |||||||||||||||||||| || || || |||| ||| |||||||| || | Sbjct: 24101 gaagcaatcaggataagctgtgctgggtatccaactagaagaactttctatgagttcata 24160 Query: 276 aatcgctttggtgttcttg 294 ||||||||||| |||||| Sbjct: 24161 gatcgctttggtattcttg 24179
>dbj|AK122154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145D02, full insert sequence Length = 4208 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgtt 275 ||||| |||||||||||||||||||| || || || |||| ||| |||||||| || | Sbjct: 1250 gaagcaatcaggataagctgtgctgggtatccaactagaagaactttctatgagttcata 1309 Query: 276 aatcgctttggtgttcttg 294 ||||||||||| |||||| Sbjct: 1310 gatcgctttggtattcttg 1328
>gb|AY907549.1| Oryza sativa (japonica cultivar-group) myosin XI B (MyoXIB) mRNA, complete cds Length = 5216 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 216 gaagctatcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgtt 275 ||||| |||||||||||||||||||| || || || |||| ||| |||||||| || | Sbjct: 2249 gaagcaatcaggataagctgtgctgggtatccaactagaagaactttctatgagttcata 2308 Query: 276 aatcgctttggtgttcttg 294 ||||||||||| |||||| Sbjct: 2309 gatcgctttggtattcttg 2327
>gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 map nga361, complete sequence Length = 100665 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 117 ccccattatattagatgtgtgaagccaaat 146 ||||||||||||||||||||||| |||||| Sbjct: 20262 ccccattatattagatgtgtgaaaccaaat 20291
>gb|AY109458.1| Zea mays CL1510_1 mRNA sequence Length = 4313 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 199 gatgtggaggtgttcttgaagctatcaggataagctgtgctggataccccacaagaaaaa 258 |||||||||| ||| | || || || ||||| || ||||||||||| || || |||| || Sbjct: 1469 gatgtggaggagttatggaggcgattaggatcagttgtgctggatatccgaccagaagaa 1528 Query: 259 cattctatgaattt 272 |||||||||||||| Sbjct: 1529 cattctatgaattt 1542
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 107 ctctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagccagccat 166 |||||| ||||| |||||||| |||||||| |||||||| ||| | || || || || || Sbjct: 16560366 ctctacagaacctcattatatcagatgtgtcaagccaaacaatgtgctaaaaccggcgat 16560425 Query: 167 ttttgagaa 175 ||||||||| Sbjct: 16560426 ttttgagaa 16560434 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 |||||||| |||||||| || |||||||||||||| Sbjct: 16561028 cagataggcaaaacaaaagtttttctgagagctgg 16561062
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 107 ctctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagccagccat 166 |||||| ||||| |||||||| |||||||| |||||||| ||| | || || || || || Sbjct: 56346 ctctacagaacctcattatatcagatgtgtcaagccaaacaatgtgctaaaaccggcgat 56405 Query: 167 ttttgagaa 175 ||||||||| Sbjct: 56406 ttttgagaa 56414 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 |||||||| |||||||| || |||||||||||||| Sbjct: 57008 cagataggcaaaacaaaagtttttctgagagctgg 57042
>gb|AF233886.1|AF233886 Vallisneria gigantea unconventional myosin XI mRNA, complete cds Length = 5116 Score = 50.1 bits (25), Expect = 0.006 Identities = 100/125 (80%) Strand = Plus / Plus Query: 120 cattatattagatgtgtgaagccaaataatctcctcaagccagccatttttgagaacaca 179 ||||||||||| ||||| ||||| ||||| || || |||||||| || |||||||| || Sbjct: 2238 cattatattaggtgtgtaaagcctaataaccttctaaagccagctatatttgagaatgca 2297 Query: 180 aacgttatacaacaactacgatgtggaggtgttcttgaagctatcaggataagctgtgct 239 || ||| | || || || |||| || ||||| | ||||| ||||||||||| || ||| Sbjct: 2298 aatgttctccagcagcttagatgcgggggtgtaatggaagcaatcaggataagttgcgct 2357 Query: 240 ggata 244 ||||| Sbjct: 2358 ggata 2362 Score = 48.1 bits (24), Expect = 0.025 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctggac-aatggctgatttggatgc 429 ||||||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 2493 cagataggaaagacaaaggtatttcttagggctggtcaaatggctgaactggatgc 2548
>dbj|AK069690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A17, full insert sequence Length = 5229 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 107 ctctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagccagccat 166 |||||| ||||| |||||||| |||||||| |||||||| ||| | || || || || || Sbjct: 2021 ctctacagaacctcattatatcagatgtgtcaagccaaacaatgtgctaaaaccggcgat 2080 Query: 167 ttttgagaa 175 ||||||||| Sbjct: 2081 ttttgagaa 2089 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 |||||||| |||||||| || |||||||||||||| Sbjct: 2289 cagataggcaaaacaaaagtttttctgagagctgg 2323
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I, complete sequence Length = 133843 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 120 cattatattagatgtgtgaagccaaataatctcctcaagccagccatttttgagaa 175 ||||| || |||||||||||||| || ||||| || ||||| ||||| |||||||| Sbjct: 81268 cattacatcagatgtgtgaagcctaacaatcttctaaagcctgccatatttgagaa 81323
>gb|AC135798.31| Medicago truncatula clone mth2-31c16, complete sequence Length = 123159 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||| ||||||||||||||||| || |||||||| Sbjct: 119767 cagatgggaaaaacaaaggtattcctcagagctgg 119801
>dbj|AK120774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O03, full insert sequence Length = 4631 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 |||||||| |||||||| || |||||||||||||| Sbjct: 1671 cagataggcaaaacaaaagtttttctgagagctgg 1705
>gb|AC155884.2| Medicago truncatula chromosome 2 BAC clone mth2-10d10, complete sequence Length = 79222 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 375 cagataggaaaaacaaaggtatttctgagagctgg 409 ||||| ||||||||||||||||| || |||||||| Sbjct: 3958 cagatgggaaaaacaaaggtattcctcagagctgg 3992
>ref|NM_119015.2| Arabidopsis thaliana XIH AT4G28710 (XIH) mRNA, complete cds Length = 2991 Score = 44.1 bits (22), Expect = 0.38 Identities = 118/150 (78%) Strand = Plus / Plus Query: 109 ctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagccagccattt 168 ||||||| || || |||||| | ||||||||||| ||||| || || ||||| || | Sbjct: 2144 ctactgagcctcactatattcgttgtgtgaagcccaataaccttctgaagcctttgatct 2203 Query: 169 ttgagaacacaaacgttatacaacaactacgatgtggaggtgttcttgaagctatcagga 228 |||||||| ||| ||| | ||||| |||||||||| || || | || || ||||||| Sbjct: 2204 ttgagaaccaaaatgttttgcaacagttacgatgtgggggcgtgatggaggcaatcagga 2263 Query: 229 taagctgtgctggataccccacaagaaaaa 258 | ||||||||||||| || |||||||||| Sbjct: 2264 ttagctgtgctggatttccgacaagaaaaa 2293
>ref|XM_661271.1| Cryptosporidium hominis TU502 unconventional myosin-A (Chro.70423) partial mRNA Length = 2451 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cattatattagatgtgtgaagccaaa 145 |||| ||||||||||||||||||||| Sbjct: 1960 cattttattagatgtgtgaagccaaa 1985
>ref|XM_628539.1| Cryptosporidium parvum Iowa II unconventional myosin (cgd7_3790), partial mRNA Length = 2451 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cattatattagatgtgtgaagccaaa 145 |||| ||||||||||||||||||||| Sbjct: 1960 cattttattagatgtgtgaagccaaa 1985
>ref|NM_104334.1| Arabidopsis thaliana XIE; motor/ protein binding AT1G54560 (XIE) mRNA, complete cds Length = 4590 Score = 42.1 bits (21), Expect = 1.5 Identities = 162/209 (77%) Strand = Plus / Plus Query: 18 ctccctgaagaaccatcaaagtcttccaaattttcatctattgggtcacgttttaagctg 77 ||||| |||||| |||| || ||||| || ||||| || ||||| || || |||||| || Sbjct: 1783 ctcccggaagaaacatctaaatcttcaaagttttcttccattggctctcgctttaagttg 1842 Query: 78 caacttcagtctctcatggagaccttgagctctactgaaccccattatattagatgtgtg 137 ||||| ||| || ||||| || || | |||||| || || || || || ||||||||| Sbjct: 1843 caactccagcaactgatggaaacattaaactctaccgagcctcactacatcagatgtgtg 1902 Query: 138 aagccaaataatctcctcaagccagccatttttgagaacacaaacgttatacaacaacta 197 ||||| ||||| || | ||||| ||| | |||||||| |||| |||| || ||||| Sbjct: 1903 aagcccaataaccttttgaagcctgccgtatttgagaatgtaaacattatgcagcaactt 1962 Query: 198 cgatgtggaggtgttcttgaagctatcag 226 || ||||| |||||| | ||||| ||||| Sbjct: 1963 cggtgtggtggtgttttggaagcgatcag 1991
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 tggctgatttggatgccggag 434 ||||||||||||||||||||| Sbjct: 455764 tggctgatttggatgccggag 455744
>ref|XM_470510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4437 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 144 aataatctcctcaagccagccatttttgagaacacaaacgttatacaacaactacgatgt 203 |||||| | ||||||||||| || |||||||||| || ||| | || ||||| |||||| Sbjct: 1831 aataatgttctcaagccagcaatatttgagaacagtaatgttctccagcaacttcgatgt 1890 Query: 204 ggaggtgttcttgaagctatcaggataag 232 || || ||| | ||||| || |||||||| Sbjct: 1891 gggggagttttagaagcaataaggataag 1919
>gb|AC146681.23| Medicago truncatula clone mth2-77o10, complete sequence Length = 130952 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 222 atcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgt 274 |||||||| ||||||||||| || ||||| |||||| | || |||||||||| Sbjct: 4021 atcaggattagctgtgctggttatcccactagaaaagcctttgatgaatttgt 4073
>gb|AC133341.11| Medicago truncatula clone mth2-28i3, complete sequence Length = 138850 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 222 atcaggataagctgtgctggataccccacaagaaaaacattctatgaatttgt 274 |||||||| ||||||||||| || ||||| |||||| | || |||||||||| Sbjct: 113711 atcaggattagctgtgctggttatcccactagaaaagcctttgatgaatttgt 113763
>emb|AL596163.1| Listeria innocua Clip11262 complete genome, segment 1/12 Length = 231450 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 atcaaagtcttccaaattttcatct 56 |||||| |||||||||||||||||| Sbjct: 24524 atcaaaatcttccaaattttcatct 24500
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 atcaggataagctgtgctggataccccacaagaaaaa 258 |||||||| ||||||||||||| || |||||||||| Sbjct: 97623 atcaggattagctgtgctggatttccgacaagaaaaa 97659
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone F16A16 (ESSAII project) Length = 97155 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 222 atcaggataagctgtgctggataccccacaagaaaaa 258 |||||||| ||||||||||||| || |||||||||| Sbjct: 79444 atcaggattagctgtgctggatttccgacaagaaaaa 79408
>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12 Length = 200050 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 atcaaagtcttccaaattttcatct 56 |||||| |||||||||||||||||| Sbjct: 25752 atcaaaatcttccaaattttcatct 25728
>gb|AC123726.11| Mus musculus chromosome 3, clone RP23-436F15, complete sequence Length = 224297 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cctgaacttctagaaggaag 316 |||||||||||||||||||| Sbjct: 201119 cctgaacttctagaaggaag 201100
>ref|NM_127588.2| Arabidopsis thaliana XIG; motor/ protein binding AT2G20290 (XIG) mRNA, complete cds Length = 4482 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 109 ctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagcc 160 ||||||| || || |||||| | || |||||||| ||||||||||| ||||| Sbjct: 1892 ctactgagcctcactatattcgttgcgtgaagcccaataatctcctgaagcc 1943
>gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tgaacttctagaaggaagta 318 |||||||||||||||||||| Sbjct: 98438 tgaacttctagaaggaagta 98419
>emb|CR956635.11| Pig DNA sequence from clone CH242-184L20 on chromosome 17, complete sequence Length = 211741 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tgaagaaccatcaaagtctt 42 |||||||||||||||||||| Sbjct: 51854 tgaagaaccatcaaagtctt 51873
>emb|AL807743.6| Human DNA sequence from clone RP11-1047H1 on chromosome X, complete sequence Length = 30826 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 aaaaatgaagttggagaact 372 |||||||||||||||||||| Sbjct: 8283 aaaaatgaagttggagaact 8264
>emb|AL441883.11| Human DNA sequence from clone RP1-223E5 on chromosome 6 Contains the SIRT5 gene for sirtuin silent mating type information regulation 2 homolog 5 (S. cerevisiae), the gene for retinoic acid repressible protein (RARG-1), the 3' end of the RANBP9 gene for RAN binding protein 9 (RanBPM) and two CpG islands, complete sequence Length = 63952 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aaaaatgaagttggagaact 372 |||||||||||||||||||| Sbjct: 33431 aaaaatgaagttggagaact 33450
>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the 3' end of the Col27a1 gene for procollagen type XXVII alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1, 2 and 3, an orosomucoid pseudogene, the gene for a novel protein similar to human AT-hook protein AKNA, gene 4933437N03Rik, the Whrn gene for whirlin and two CpG islands, complete sequence Length = 214370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gtgttcttggccctgaactt 305 |||||||||||||||||||| Sbjct: 57766 gtgttcttggccctgaactt 57785
>ref|NM_143292.1| Drosophila melanogaster CG5987-RA (CG5987), mRNA Length = 2479 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 acaactacgatgtggaggtgttct 214 |||||||||||||||||| ||||| Sbjct: 1323 acaactacgatgtggaggagttct 1346
>gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map mi148, complete sequence Length = 93868 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 109 ctactgaaccccattatattagatgtgtgaagccaaataatctcctcaagcc 160 ||||||| || || |||||| | || |||||||| ||||||||||| ||||| Sbjct: 63777 ctactgagcctcactatattcgttgcgtgaagcccaataatctcctgaagcc 63828
>gb|AC109465.3| Homo sapiens chromosome 5 clone RP11-298P6, complete sequence Length = 188150 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gaaaaaatgaagttggagaactac 374 ||||||| |||||||||||||||| Sbjct: 87101 gaaaaaaggaagttggagaactac 87078
>gb|AY089310.1| Drosophila melanogaster AT11276 full insert cDNA Length = 2488 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 acaactacgatgtggaggtgttct 214 |||||||||||||||||| ||||| Sbjct: 1311 acaactacgatgtggaggagttct 1334
>gb|AC068860.9| Homo sapiens chromosome 11, clone RP11-371I20, complete sequence Length = 110019 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aaaaatgaagttggagaact 372 |||||||||||||||||||| Sbjct: 107252 aaaaatgaagttggagaact 107271
>ref|XM_678978.1| PREDICTED: Danio rerio similar to Myosin IXb (Unconventional myosin-9b) (LOC556225), mRNA Length = 3777 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 ctaccagataggaaaaacaaaggt 394 |||||||||||||||||| ||||| Sbjct: 2031 ctaccagataggaaaaaccaaggt 2054
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttgagaacacaaacgttata 188 |||||||||||||||||||| Sbjct: 44334 ttgagaacacaaacgttata 44353
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tctggaaaaaatgaagttgg 366 |||||||||||||||||||| Sbjct: 277528 tctggaaaaaatgaagttgg 277509
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aaaaatgaagttggagaact 372 |||||||||||||||||||| Sbjct: 1933 aaaaatgaagttggagaact 1952
>gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gacaatggctgatttggatg 428 |||||||||||||||||||| Sbjct: 124141 gacaatggctgatttggatg 124160
>gb|AC009848.9|AC009848 Drosophila melanogaster, chromosome 3R, region 97E-98A, BAC clone BACR02B05, complete sequence Length = 189694 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 acaactacgatgtggaggtgttct 214 |||||||||||||||||| ||||| Sbjct: 63638 acaactacgatgtggaggagttct 63615
>gb|AF376779.1| Proteus mirabilis cma482::mini-Tn5lacZ upstream sequence Length = 652 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ataggaaaaacaaaggtatt 397 |||||||||||||||||||| Sbjct: 140 ataggaaaaacaaaggtatt 159
>gb|AC113990.10| Mus musculus chromosome 3, clone RP24-137C19, complete sequence Length = 181758 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cctgaacttctagaaggaag 316 |||||||||||||||||||| Sbjct: 172351 cctgaacttctagaaggaag 172370
>ref|NM_211376.1| Eremothecium gossypii AGL353Wp (AGL353W), mRNA Length = 5343 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttgagaacacaaacgttata 188 |||||||||||||||||||| Sbjct: 2557 ttgagaacacaaacgttata 2576
>ref|NM_210024.1| Eremothecium gossypii AEL190Wp (AEL190W), mRNA Length = 2655 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tctggaaaaaatgaagttgg 366 |||||||||||||||||||| Sbjct: 1672 tctggaaaaaatgaagttgg 1653
>emb|BX255885.5| Zebrafish DNA sequence from clone CH211-213M12 in linkage group 4, complete sequence Length = 134701 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 aatggctgatttggatgccggagg 435 ||||||||||||||||||| |||| Sbjct: 117899 aatggctgatttggatgccagagg 117922
>gb|AF078736.1|AF078736 Escherichia coli O111 O antigen gene cluster, partial sequence Length = 14516 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ttcttgaagctatcaggata 230 |||||||||||||||||||| Sbjct: 2320 ttcttgaagctatcaggata 2339
>gb|AE003760.3| Drosophila melanogaster chromosome 3R, section 98 of 118 of the complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 acaactacgatgtggaggtgttct 214 |||||||||||||||||| ||||| Sbjct: 10426 acaactacgatgtggaggagttct 10403
>gb|AC157768.4| Mus musculus chromosome 1, clone RP24-308M3, complete sequence Length = 202770 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tttgagaacacaaacgttat 187 |||||||||||||||||||| Sbjct: 198506 tttgagaacacaaacgttat 198487
>gb|AC104896.13| Mus musculus chromosome 1, clone RP23-299F18, complete sequence Length = 184316 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tttgagaacacaaacgttat 187 |||||||||||||||||||| Sbjct: 61528 tttgagaacacaaacgttat 61547
>emb|AL449212.1|HS436B3 Homo sapiens chromosome 3 sequence from PAC RP3-436B3 map 3q21 region D3S3607-D3S1587, complete sequence Length = 67335 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gacaatggctgatttggatg 428 |||||||||||||||||||| Sbjct: 62685 gacaatggctgatttggatg 62666
>gb|AC002980.1|AC002980 Homo sapiens Xp22 BAC 620F15 (Genome Systems BAC library) complete sequence Length = 141475 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 tgccaaaagattctggaaaaaatg 359 ||||||||||||||| |||||||| Sbjct: 72418 tgccaaaagattctgaaaaaaatg 72395
>emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chromosome 4, complete sequence Length = 244187 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 caaaagattctggaaaaaat 358 |||||||||||||||||||| Sbjct: 137947 caaaagattctggaaaaaat 137966
>gb|U24278.1|MMU24278 Mus musculus alpha-1-acid glycoprotein-2 gene, complete cds Length = 1043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gtgttcttggccctgaactt 305 |||||||||||||||||||| Sbjct: 390 gtgttcttggccctgaactt 409 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,873,283 Number of Sequences: 3902068 Number of extensions: 4873283 Number of successful extensions: 95127 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 94719 Number of HSP's gapped (non-prelim): 396 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)