Clone Name | bastl42b06 |
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Clone Library Name | barley_pub |
>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis| thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 286 DILLDCGATGKGDDTDGRQWAGD 354 DI +DCG++ D D R W GD Sbjct: 28 DISIDCGSSSSHIDADNRTWVGD 50
>IF2_SHIFL (Q83JF9) Translation initiation factor IF-2| Length = 882 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 240 EGGRGRGRNAKAARPKKGN 258
>IF2_SHIBS (Q31W47) Translation initiation factor IF-2| Length = 882 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 240 EGGRGRGRNAKAARPKKGN 258
>IF2_SHISS (Q3YX73) Translation initiation factor IF-2| Length = 890 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 248 EGGRGRGRNAKAARPKKGN 266
>IF2_SHIDS (Q32BG5) Translation initiation factor IF-2| Length = 890 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 248 EGGRGRGRNAKAARPKKGN 266
>IF2_ECOLI (P0A705) Translation initiation factor IF-2| Length = 890 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 248 EGGRGRGRNAKAARPKKGN 266
>IF2_ECOL6 (P59587) Translation initiation factor IF-2| Length = 890 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 248 EGGRGRGRNAKAARPKKGN 266
>IF2_ECO57 (P0A706) Translation initiation factor IF-2| Length = 890 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 273 ERGRGRGRVAPSLRPRRGD 217 E GRGRGR A + RP++G+ Sbjct: 248 EGGRGRGRNAKAARPKKGN 266 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,537,129 Number of Sequences: 219361 Number of extensions: 244712 Number of successful extensions: 1071 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1034 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1069 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)