>gb|AF024589.1| X Tritordeum sp. glycine decarboxylase P subunit mRNA, complete cds
          Length = 3487

 Score =  143 bits (72), Expect = 2e-31
 Identities = 84/88 (95%)
 Strand = Plus / Plus

                                                                       
Query: 65  cccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcggcc 124
           |||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 251 cccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggaggcacaactccgcc 310

                                       
Query: 125 acccccgccgagcaggccgttatggcgt 152
           |||||||||||||||||||| |||||||
Sbjct: 311 acccccgccgagcaggccgtcatggcgt 338

>gb|U11693.1|ASU11693 Avena sativa victorin binding protein mRNA, complete cds
          Length = 3408

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 71  tccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcggccaccccc 130
           ||||| || ||||||| |||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 251 tccgtctccgcgctgcagcccagcgacaccttcccgcggaggcacaactccgcctccccc 310

                               
Query: 131 gccgagcaggccgttatggc 150
           ||||||||| |||| |||||
Sbjct: 311 gccgagcagaccgtcatggc 330

>ref|NM_191707.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3102

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 62  cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
           |||||||| || | ||||||||||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 175 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 234

                               
Query: 122 gccacccccgccgagcaggc 141
           ||||| || || ||||||||
Sbjct: 235 gccacgccggcggagcaggc 254

>gb|AY495085.1| Oryza sativa (indica cultivar-group) glycine dehydrogenase P
           protein (GDC) mRNA, complete cds
          Length = 2679

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 62  cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
           |||||||| || | ||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 169 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcg 228

                               
Query: 122 gccacccccgccgagcaggc 141
           || || || || ||||||||
Sbjct: 229 gcgacgccggcggagcaggc 248

>gb|AY346327.1| Oryza sativa (japonica cultivar-group) glycine dehydrogenase P
           protein mRNA, complete cds
          Length = 3102

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 62  cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
           |||||||| || | ||||||||||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 175 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 234

                               
Query: 122 gccacccccgccgagcaggc 141
           ||||| || || ||||||||
Sbjct: 235 gccacgccggcggagcaggc 254

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 62       cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
                |||||||| || | ||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 24022085 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcg 24022026

                                    
Query: 122      gccacccccgccgagcaggc 141
                || || || || ||||||||
Sbjct: 24022025 gcgacgccggcggagcaggc 24022006

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 62       cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
                |||||||| || | ||||||||||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 29553883 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 29553942

                                    
Query: 122      gccacccccgccgagcaggc 141
                ||||| || || ||||||||
Sbjct: 29553943 gccacgccggcggagcaggc 29553962

>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1142C05
          Length = 151457

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                         
Query: 62    cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
             |||||||| || | ||||||||||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 23703 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 23762

                                 
Query: 122   gccacccccgccgagcaggc 141
             ||||| || || ||||||||
Sbjct: 23763 gccacgccggcggagcaggc 23782

>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0456F08
          Length = 156850

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                          
Query: 62     cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
              |||||||| || | ||||||||||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 120157 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 120216

                                  
Query: 122    gccacccccgccgagcaggc 141
              ||||| || || ||||||||
Sbjct: 120217 gccacgccggcggagcaggc 120236

>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0429G06
          Length = 158321

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 62    cggcccgtctccgtgtcggcgctgcggcccagcgacaccttcccgcggcggcacaactcg 121
             |||||||| || | ||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 31778 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcg 31719

                                 
Query: 122   gccacccccgccgagcaggc 141
             || || || || ||||||||
Sbjct: 31718 gcgacgccggcggagcaggc 31699

>ref|NM_128167.2| Arabidopsis thaliana glycine dehydrogenase (decarboxylating)
           AT2G26080 mRNA, complete cds
          Length = 3487

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 92  agcgacaccttcccgcggcggcacaactc 120
           |||||||| |||||||| |||||||||||
Sbjct: 283 agcgacactttcccgcgccggcacaactc 311

>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete
             sequence
          Length = 87080

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 92    agcgacaccttcccgcggcggcacaactc 120
             |||||||| |||||||| |||||||||||
Sbjct: 30949 agcgacactttcccgcgccggcacaactc 30977

>emb|AJ131717.1|PST131717 Pseudomonas stutzeri nrdD (partial) and dnrS genes
          Length = 1129

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 ggcggcacaactcggccacc 127
           ||||||||||||||||||||
Sbjct: 442 ggcggcacaactcggccacc 423

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     ccgtgtcggcgctgcggccc 91
              ||||||||||||||||||||
Sbjct: 972979 ccgtgtcggcgctgcggccc 972998

>dbj|AP004486.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05B20, TM0019a,
            complete sequence
          Length = 73833

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 89   cccagcgacaccttcccgcggcggcacaactc 120
            ||||||||||| |||||| | |||||||||||
Sbjct: 9510 cccagcgacacgttcccgagacggcacaactc 9479

>gb|AC159435.1| Trypanosoma brucei chromosome 8 clone RPCI93-29H22, complete sequence
          Length = 148464

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 2     cgcccgttcccactctacttgcc 24
             |||||| ||||||||||||||||
Sbjct: 52309 cgcccgctcccactctacttgcc 52331

>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 2       cgcccgttcccactctacttgcc 24
               |||||| ||||||||||||||||
Sbjct: 1262532 cgcccgctcccactctacttgcc 1262554

>ref|XM_604806.2| PREDICTED: Bos taurus similar to Disks large-associated protein 1
           (DAP-1) (Guanylate kinase-associated protein) (hGKAP)
           (SAP90/PSD-95-associated protein 1) (SAPAP1)
           (PSD-95/SAP90-binding protein 1) (LOC526435), partial
           mRNA
          Length = 2357

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 97  caccttcccgcggcggcac 115
           |||||||||||||||||||
Sbjct: 474 caccttcccgcggcggcac 492

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 64      gcccgtctccgtgtcggcgctgc 86
               |||||||| ||||||||||||||
Sbjct: 1588749 gcccgtctgcgtgtcggcgctgc 1588771

>gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 unknown
            polyketide biosynthetic gene cluster, partial sequence;
            and AHBA biosynthesis gene cluster, complete sequence
          Length = 55488

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 74   gtgtcggcgctgcggccca 92
            |||||||||||||||||||
Sbjct: 6563 gtgtcggcgctgcggccca 6545

>ref|XM_819320.1| Trypanosoma brucei TREU927 clone RPCI93-29H22 hypothetical protein
           (Tb927.8.4240) partial mRNA
          Length = 5070

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 2   cgcccgttcccactctacttgcc 24
           |||||| ||||||||||||||||
Sbjct: 316 cgcccgctcccactctacttgcc 294

>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     gtcggcgctgcggcccagc 94
              |||||||||||||||||||
Sbjct: 191879 gtcggcgctgcggcccagc 191897

>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 78     cggcgctgcggcccagcga 96
              |||||||||||||||||||
Sbjct: 313495 cggcgctgcggcccagcga 313513

>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 76    gtcggcgctgcggcccagc 94
             |||||||||||||||||||
Sbjct: 46338 gtcggcgctgcggcccagc 46320

>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 78     cggcgctgcggcccagcga 96
              |||||||||||||||||||
Sbjct: 221349 cggcgctgcggcccagcga 221367

>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    gtcggcgctgcggcccagc 94
             |||||||||||||||||||
Sbjct: 61250 gtcggcgctgcggcccagc 61268

>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    cggcgctgcggcccagcga 96
             |||||||||||||||||||
Sbjct: 88815 cggcgctgcggcccagcga 88833

>gb|AE005997.1| Caulobacter crescentus CB15 section 323 of 359 of the complete genome
          Length = 11386

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   ccgtgtcggcgctgcggcc 90
            |||||||||||||||||||
Sbjct: 3700 ccgtgtcggcgctgcggcc 3718

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     gcgacaccttcccgcggcg 111
              |||||||||||||||||||
Sbjct: 115172 gcgacaccttcccgcggcg 115190

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 120     cggccacccccgccgagcaggcc 142
               ||||||||| |||||||||||||
Sbjct: 2121823 cggccaccctcgccgagcaggcc 2121801


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 754,321
Number of Sequences: 3902068
Number of extensions: 754321
Number of successful extensions: 54879
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54058
Number of HSP's gapped (non-prelim): 821
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)