>MAUG_METME (Q50233) Methylamine utilization protein mauG precursor|
          Length = 335

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 40  LPAALSLLTHAFSTVHLQQLVAD*PWDWEGSIHGVE 147
           +P+ ++L+ HAF T  L+ L  D P+  +GSI G++
Sbjct: 246 VPSQVTLMQHAFKTPSLRDLSIDGPYMHDGSIRGLK 281

>MAUG_METFL (Q50426) Methylamine utilization protein mauG precursor|
          Length = 333

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +1

Query: 40  LPAALSLLTHAFSTVHLQQLVAD*PWDWEGSIHGVEEL 153
           +P  ++++ HAF T  L+ L  + P+  +GS+H ++E+
Sbjct: 244 VPPQVTIMQHAFKTPTLRDLPRNGPFMHDGSMHSLDEV 281

>NIA_LOTJA (P39869) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)|
          Length = 900

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 181 HGAQQQPPSPALPHHGWILPSP 116
           H    +PP P L HHG+I P P
Sbjct: 99  HPFNSEPPLPRLMHHGFITPVP 120

>NIA2_SOYBN (P39870) Inducible nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR)|
          Length = 890

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 181 HGAQQQPPSPALPHHGWILPSP 116
           H    +PP P L HHG+I P P
Sbjct: 96  HPFNSEPPLPRLMHHGFITPVP 117

>NIA2_BRANA (P39868) Nitrate reductase [NADH], clone PBNBR1412 (EC 1.7.1.1)|
           (NR)
          Length = 911

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 181 HGAQQQPPSPALPHHGWILPSP 116
           H    +PP P L HHG+I P P
Sbjct: 118 HPFNAEPPLPRLMHHGFITPVP 139

>POLG_POWVL (Q04538) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1);
           Nonstructural protein 2A (NS2A); Flavivirin protease
           NS2B regulatory subunit;
          Length = 3415

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 119 TGKDPSMVWKSWGRRLLLS 175
           TGK+  + WKSWG+ +L S
Sbjct: 884 TGKESKVSWKSWGKSILWS 902

>NIA1_PHAVU (P39865) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1)|
          Length = 881

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 181 HGAQQQPPSPALPHHGWILPSP 116
           H    +PP P L  HG+I PSP
Sbjct: 94  HPFNAEPPLPRLMQHGFITPSP 115

>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -3

Query: 199 ARAEEHHGAQQQP---PSPALPHHGWILPSP 116
           A A  HH  QQQP   P P   HHG   P P
Sbjct: 474 APAHHHHQQQQQPQPQPQPQQHHHGNSGPPP 504

>ADRB1_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor) (Beta-T)
          Length = 483

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 181 HGAQQQPPSPALPHHGWILPSPRVSQ 104
           +G+Q+QP  P LP H  IL + R S+
Sbjct: 249 YGSQEQPQPPPLPQHQPILGNGRASK 274


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,283,831
Number of Sequences: 219361
Number of extensions: 552993
Number of successful extensions: 2024
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2017
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)