Clone Name | bastl42a09 |
---|---|
Clone Library Name | barley_pub |
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 30.8 bits (68), Expect = 0.89 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -2 Query: 320 PPEAHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRP 204 PP + PPT P R L S FH + P PRP Sbjct: 308 PPTSTPPTPPLRHAATRFATSLGSAFHPVLPHYATVPRP 346
>H2B2_PARAN (P02291) Histone H2B.2, sperm| Length = 143 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +1 Query: 19 PRLSTP----PLF*SSPRRGGLGF*RA*SRGSRKRVAEARR 129 PR +P P +SP+RGG G RA G R+RV + RR Sbjct: 9 PRKGSPRKGSPSRKASPKRGGKGAKRAGKGGRRRRVVKRRR 49
>Y4QF_RHISN (P55627) Probable peptidase y4qF (EC 3.4.21.-)| Length = 754 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 142 SLSPPLPEAQPRIRVV 189 SL PPLP A+PRIRV+ Sbjct: 36 SLRPPLPRAEPRIRVL 51
>H2B3_PARAN (P02292) Histone H2B.3, sperm| Length = 148 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +1 Query: 19 PRLSTP----PLF*SSPRRGGLGF*RA*SRGSRKRVAEARR 129 PR +P P +SP+RGG G RA G R+RV + RR Sbjct: 14 PRKGSPRKGSPSRKASPKRGGKGAKRAGKGGRRRRVVKRRR 54
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = -2 Query: 320 PPEAHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRPGSAHLTTRILGCASGSGGERE 141 PP+ P SPG S TS L++ RL S++ +LG +SGSG Sbjct: 631 PPQGKPSPSPGSSSSSTSPATLSTQPTRL----------NSSYSIHSLLGGSSGSGSSSS 680 Query: 140 RES 132 S Sbjct: 681 SSS 683
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Frame = -1 Query: 240 PSLSSVPKRT*AWICTPHDPNPXXXXXXXXXXXXRV-APPRLGHPLSTTTRLGPSK 76 P+++S PK+ + P P P PP L PL TT + P+K Sbjct: 336 PNVTSAPKKATSAPAPPPPPLPAAMSSASTNSVKATPVPPTLAPPLPNTTSVPPNK 391
>BRCA2_FELCA (Q864S8) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3372 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -2 Query: 269 SVVDLASPFHRLYPRSQKGPRPGSAHLTTRILGCASGSGGERERESPR 126 S ++ SP P+++ P PGSA +T++ S GERE + P+ Sbjct: 3166 SEMNYQSPLSLCKPKAKSVPTPGSAQMTSK-----SCYKGERELDDPK 3208
>BTNL2_RAT (Q6MG97) Butyrophilin-like protein 2 precursor| Length = 454 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 Query: 44 SNPPLAVEG*GFEGPNLVVVERGW 115 S+P + VEG G EG LV RGW Sbjct: 146 SSPNIHVEGPGEEGVQLVCTSRGW 169
>FBPC_AGRT5 (Q8U6M1) Ferric cations import ATP-binding protein fbpC (EC| 3.6.3.30) Length = 353 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -2 Query: 275 DTSVVDLASPFHRLYPRSQKGPRPGSAHLTTR----ILGCASGSG 153 D S+V + + HR+ R GPR GSA L R +G A GSG Sbjct: 255 DESLVRVGTMEHRVRSR---GPRSGSAKLAVRPGAITIGAAGGSG 296
>SVF1_SCHPO (Q09885) Survival factor 1| Length = 380 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 311 AHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRPGSAHLTTRI 177 A P P + T+ V +PFHRL K P S+H+ T++ Sbjct: 16 AEPVYGPEAIQPVTASVQGINPFHRLEADDFKWSTPSSSHVETQV 60
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 305 PPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRP 204 PP PG +R + V+ P + ++P+ Q+GP P Sbjct: 2429 PPPYPGSTR--SPVIPPLGPRYAVFPKDQRGPYP 2460
>TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-)| (Polyserase-1) (Polyserine protease 1) (Polyserase-I) [Contains: Serase-1; Serase-2; Serase-3] Length = 1061 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 129 PPRLGHPLSTTTRLGPSKP*PSTARGGLE*GRSGEARPERAS 4 P HP +++TRL PS+P +TA G + +G RA+ Sbjct: 741 PSSTAHPHTSSTRLIPSQPPTTTAAGLIPEASTGRPATLRAT 782
>E13B_SOYBN (P52395) Glucan endo-1,3-beta-glucosidase (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Fragment) Length = 255 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 59 AVEG*GFEGPNLVVVERGWPRRGGATLSL 145 A+E G +VV E GWP GGA S+ Sbjct: 168 ALENVGASNLQIVVSESGWPSEGGAGASI 196
>E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 347 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 Query: 59 AVEG*GFEGPNLVVVERGWPRRGGATLSL 145 A+E G N+VV E GWP GG SL Sbjct: 255 ALEKAGGGSLNIVVSESGWPSSGGTATSL 283
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Frame = -2 Query: 320 PPEAH---PPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRP 204 PP H PPT+PG V A P H+ Q P+P Sbjct: 344 PPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQP 385
>ABL1_MOUSE (P00520) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)| (p150) (c-ABL) (Abelson murine leukemia viral oncogene homolog 1) Length = 1123 Score = 27.7 bits (60), Expect = 7.5 Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 3/92 (3%) Frame = -2 Query: 275 DTSVVDLASPFHRLYPRSQKGPRPGSAHLTTRILGCASGSGGERERESPRLASATLF-LL 99 ++ +D L PR ++GP GS + E ER PR LF L Sbjct: 558 ESDALDSEPAVSPLLPRKERGPPDGSLN--------------EDERLLPRDRKTNLFSAL 603 Query: 98 PRD*ALQNPNPPRRGED*NK--GGVERRGRSE 9 + P PP+R + G +RRG SE Sbjct: 604 IKKKKKMAPTPPKRSSSFREMDGQPDRRGASE 635
>CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin| repeat and pleckstrin homology domain-containing protein 3) Length = 1544 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 91 SRGSRKRVAEARRGDSLSLSPPLPEAQPRIRVVRCADPG 207 SRG R + A+ + DS +S P P +P V DPG Sbjct: 165 SRG-RAQAAQDKAPDSSQISAPTPALRPTTGTVHIMDPG 202
>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2| Length = 917 Score = 27.3 bits (59), Expect = 9.8 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 16/102 (15%) Frame = -2 Query: 278 HDTSVVDLASPFHRLYPRSQKG---PR-----------PGSAHLTTRILGCASGSGGERE 141 H T V LA+P RL P +++ PR P + T + A+ G + Sbjct: 196 HSTGGVQLAAPVQRLRPLAERAIMPPRPVQPSRPAAAAPARNNETLHLRSGAAAGGDDER 255 Query: 140 RESPRLASATLFLLPRD*ALQNPNPPRRGED*NK--GGVERR 21 R +PR R P PPRR ++ GG +RR Sbjct: 256 RPAPR----------RSGPGAPPAPPRRPSAPSRKGGGSDRR 287
>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = -2 Query: 326 EEPPEAHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRPGS 198 E PP+A P +P T P H P ++GP P + Sbjct: 81 EHPPDAEQPAAPAAEHAPT-------PTHEAAPAHEEGPPPAA 116
>RPGF3_RAT (Q9Z1C8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) Length = 884 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -3 Query: 310 LILPRLPGGADTTRV**TWRRLFTVSILGPKKDLGLDLHTSRPESSA 170 L+L R GA +R R +TV P+K L L L RP+SSA Sbjct: 322 LVLERTSQGAGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSA 368
>RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) Length = 876 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -3 Query: 310 LILPRLPGGADTTRV**TWRRLFTVSILGPKKDLGLDLHTSRPESSA 170 L+L R GA +R R +TV P+K L L L RP+SSA Sbjct: 322 LVLERTSQGAGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSA 368 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,321,565 Number of Sequences: 219361 Number of extensions: 976413 Number of successful extensions: 2898 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2764 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2896 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)