ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline... 31 0.89
2H2B2_PARAN (P02291) Histone H2B.2, sperm 29 2.6
3Y4QF_RHISN (P55627) Probable peptidase y4qF (EC 3.4.21.-) 29 2.6
4H2B3_PARAN (P02292) Histone H2B.3, sperm 29 2.6
5HLES_DROME (Q02308) Protein hairless 29 2.6
6VRP1_YEAST (P37370) Verprolin 29 3.4
7BRCA2_FELCA (Q864S8) Breast cancer type 2 susceptibility protein... 29 3.4
8BTNL2_RAT (Q6MG97) Butyrophilin-like protein 2 precursor 28 4.4
9FBPC_AGRT5 (Q8U6M1) Ferric cations import ATP-binding protein fb... 28 4.4
10SVF1_SCHPO (Q09885) Survival factor 1 28 5.7
11MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia p... 28 5.7
12TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-... 28 5.7
13E13B_SOYBN (P52395) Glucan endo-1,3-beta-glucosidase (EC 3.2.1.3... 28 5.7
14E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (... 28 5.7
15RB97D_DROME (Q02926) Ribonucleoprotein RB97D 28 7.5
16ABL1_MOUSE (P00520) Proto-oncogene tyrosine-protein kinase ABL1 ... 28 7.5
17CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GA... 28 7.5
18IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2 27 9.8
19MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protei... 27 9.8
20RPGF3_RAT (Q9Z1C8) Rap guanine nucleotide exchange factor 3 (cAM... 27 9.8
21RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (c... 27 9.8

>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -2

Query: 320 PPEAHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRP 204
           PP + PPT P R         L S FH + P     PRP
Sbjct: 308 PPTSTPPTPPLRHAATRFATSLGSAFHPVLPHYATVPRP 346



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>H2B2_PARAN (P02291) Histone H2B.2, sperm|
          Length = 143

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +1

Query: 19  PRLSTP----PLF*SSPRRGGLGF*RA*SRGSRKRVAEARR 129
           PR  +P    P   +SP+RGG G  RA   G R+RV + RR
Sbjct: 9   PRKGSPRKGSPSRKASPKRGGKGAKRAGKGGRRRRVVKRRR 49



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>Y4QF_RHISN (P55627) Probable peptidase y4qF (EC 3.4.21.-)|
          Length = 754

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 142 SLSPPLPEAQPRIRVV 189
           SL PPLP A+PRIRV+
Sbjct: 36  SLRPPLPRAEPRIRVL 51



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>H2B3_PARAN (P02292) Histone H2B.3, sperm|
          Length = 148

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +1

Query: 19  PRLSTP----PLF*SSPRRGGLGF*RA*SRGSRKRVAEARR 129
           PR  +P    P   +SP+RGG G  RA   G R+RV + RR
Sbjct: 14  PRKGSPRKGSPSRKASPKRGGKGAKRAGKGGRRRRVVKRRR 54



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>HLES_DROME (Q02308) Protein hairless|
          Length = 1077

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = -2

Query: 320 PPEAHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRPGSAHLTTRILGCASGSGGERE 141
           PP+  P  SPG S   TS   L++   RL           S++    +LG +SGSG    
Sbjct: 631 PPQGKPSPSPGSSSSSTSPATLSTQPTRL----------NSSYSIHSLLGGSSGSGSSSS 680

Query: 140 RES 132
             S
Sbjct: 681 SSS 683



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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = -1

Query: 240 PSLSSVPKRT*AWICTPHDPNPXXXXXXXXXXXXRV-APPRLGHPLSTTTRLGPSK 76
           P+++S PK+  +    P  P P                PP L  PL  TT + P+K
Sbjct: 336 PNVTSAPKKATSAPAPPPPPLPAAMSSASTNSVKATPVPPTLAPPLPNTTSVPPNK 391



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>BRCA2_FELCA (Q864S8) Breast cancer type 2 susceptibility protein homolog (Fanconi|
            anemia group D1 protein homolog)
          Length = 3372

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 269  SVVDLASPFHRLYPRSQKGPRPGSAHLTTRILGCASGSGGERERESPR 126
            S ++  SP     P+++  P PGSA +T++     S   GERE + P+
Sbjct: 3166 SEMNYQSPLSLCKPKAKSVPTPGSAQMTSK-----SCYKGERELDDPK 3208



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>BTNL2_RAT (Q6MG97) Butyrophilin-like protein 2 precursor|
          Length = 454

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 44  SNPPLAVEG*GFEGPNLVVVERGW 115
           S+P + VEG G EG  LV   RGW
Sbjct: 146 SSPNIHVEGPGEEGVQLVCTSRGW 169



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>FBPC_AGRT5 (Q8U6M1) Ferric cations import ATP-binding protein fbpC (EC|
           3.6.3.30)
          Length = 353

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = -2

Query: 275 DTSVVDLASPFHRLYPRSQKGPRPGSAHLTTR----ILGCASGSG 153
           D S+V + +  HR+  R   GPR GSA L  R     +G A GSG
Sbjct: 255 DESLVRVGTMEHRVRSR---GPRSGSAKLAVRPGAITIGAAGGSG 296



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>SVF1_SCHPO (Q09885) Survival factor 1|
          Length = 380

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 311 AHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRPGSAHLTTRI 177
           A P   P   +  T+ V   +PFHRL     K   P S+H+ T++
Sbjct: 16  AEPVYGPEAIQPVTASVQGINPFHRLEADDFKWSTPSSSHVETQV 60



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>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 305  PPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRP 204
            PP  PG +R  + V+    P + ++P+ Q+GP P
Sbjct: 2429 PPPYPGSTR--SPVIPPLGPRYAVFPKDQRGPYP 2460



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>TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-)|
           (Polyserase-1) (Polyserine protease 1) (Polyserase-I)
           [Contains: Serase-1; Serase-2; Serase-3]
          Length = 1061

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 129 PPRLGHPLSTTTRLGPSKP*PSTARGGLE*GRSGEARPERAS 4
           P    HP +++TRL PS+P  +TA G +    +G     RA+
Sbjct: 741 PSSTAHPHTSSTRLIPSQPPTTTAAGLIPEASTGRPATLRAT 782



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>E13B_SOYBN (P52395) Glucan endo-1,3-beta-glucosidase (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Fragment)
          Length = 255

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 59  AVEG*GFEGPNLVVVERGWPRRGGATLSL 145
           A+E  G     +VV E GWP  GGA  S+
Sbjct: 168 ALENVGASNLQIVVSESGWPSEGGAGASI 196



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>E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 347

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 59  AVEG*GFEGPNLVVVERGWPRRGGATLSL 145
           A+E  G    N+VV E GWP  GG   SL
Sbjct: 255 ALEKAGGGSLNIVVSESGWPSSGGTATSL 283



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>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -2

Query: 320 PPEAH---PPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRP 204
           PP  H   PPT+PG       V   A P H+     Q  P+P
Sbjct: 344 PPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQP 385



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>ABL1_MOUSE (P00520) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)|
           (p150) (c-ABL) (Abelson murine leukemia viral oncogene
           homolog 1)
          Length = 1123

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
 Frame = -2

Query: 275 DTSVVDLASPFHRLYPRSQKGPRPGSAHLTTRILGCASGSGGERERESPRLASATLF-LL 99
           ++  +D       L PR ++GP  GS +              E ER  PR     LF  L
Sbjct: 558 ESDALDSEPAVSPLLPRKERGPPDGSLN--------------EDERLLPRDRKTNLFSAL 603

Query: 98  PRD*ALQNPNPPRRGED*NK--GGVERRGRSE 9
            +      P PP+R     +  G  +RRG SE
Sbjct: 604 IKKKKKMAPTPPKRSSSFREMDGQPDRRGASE 635



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>CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin|
           repeat and pleckstrin homology domain-containing protein
           3)
          Length = 1544

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 91  SRGSRKRVAEARRGDSLSLSPPLPEAQPRIRVVRCADPG 207
           SRG R + A+ +  DS  +S P P  +P    V   DPG
Sbjct: 165 SRG-RAQAAQDKAPDSSQISAPTPALRPTTGTVHIMDPG 202



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>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2|
          Length = 917

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
 Frame = -2

Query: 278 HDTSVVDLASPFHRLYPRSQKG---PR-----------PGSAHLTTRILGCASGSGGERE 141
           H T  V LA+P  RL P +++    PR           P   + T  +   A+  G +  
Sbjct: 196 HSTGGVQLAAPVQRLRPLAERAIMPPRPVQPSRPAAAAPARNNETLHLRSGAAAGGDDER 255

Query: 140 RESPRLASATLFLLPRD*ALQNPNPPRRGED*NK--GGVERR 21
           R +PR          R      P PPRR    ++  GG +RR
Sbjct: 256 RPAPR----------RSGPGAPPAPPRRPSAPSRKGGGSDRR 287



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>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa|
           protein)
          Length = 537

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -2

Query: 326 EEPPEAHPPTSPGRSRHDTSVVDLASPFHRLYPRSQKGPRPGS 198
           E PP+A  P +P      T       P H   P  ++GP P +
Sbjct: 81  EHPPDAEQPAAPAAEHAPT-------PTHEAAPAHEEGPPPAA 116



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>RPGF3_RAT (Q9Z1C8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated|
           guanine nucleotide exchange factor I) (cAMP-GEFI)
           (Exchange factor directly activated by cAMP 1) (Epac 1)
          Length = 884

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -3

Query: 310 LILPRLPGGADTTRV**TWRRLFTVSILGPKKDLGLDLHTSRPESSA 170
           L+L R   GA  +R     R  +TV    P+K L L L   RP+SSA
Sbjct: 322 LVLERTSQGAGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSA 368



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>RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated|
           guanine nucleotide exchange factor I) (cAMP-GEFI)
           (Exchange factor directly activated by cAMP 1) (Epac 1)
          Length = 876

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -3

Query: 310 LILPRLPGGADTTRV**TWRRLFTVSILGPKKDLGLDLHTSRPESSA 170
           L+L R   GA  +R     R  +TV    P+K L L L   RP+SSA
Sbjct: 322 LVLERTSQGAGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSA 368


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,321,565
Number of Sequences: 219361
Number of extensions: 976413
Number of successful extensions: 2898
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2896
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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