Clone Name | bastl42a05 |
---|---|
Clone Library Name | barley_pub |
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctcgaagccgtcaccaccgcc 37 ||||||||||||||||||||| Sbjct: 267083 ctcgaagccgtcaccaccgcc 267103
>ref|XM_322526.1| Neurospora crassa OR74A hypothetical protein (NCU00441.1) partial mRNA Length = 981 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cctcctctgtctcgaagccg 26 |||||||||||||||||||| Sbjct: 582 cctcctctgtctcgaagccg 563
>ref|XM_951612.1| Neurospora crassa OR74A hypothetical protein (NCU00441.1) partial mRNA Length = 981 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cctcctctgtctcgaagccg 26 |||||||||||||||||||| Sbjct: 582 cctcctctgtctcgaagccg 563
>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7 Length = 93134 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cctcctctgtctcgaagccg 26 |||||||||||||||||||| Sbjct: 13174 cctcctctgtctcgaagccg 13193
>ref|XM_753245.1| Ustilago maydis 521 hypothetical protein (UM02191.1) partial mRNA Length = 2277 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 cgaagccgtcaccaccgcc 37 ||||||||||||||||||| Sbjct: 1638 cgaagccgtcaccaccgcc 1656
>ref|NM_193807.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3369 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 191 tcgaagccgtcaccaccg 208
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 ccgtccctcctctgtctc 19 |||||||||||||||||| Sbjct: 962677 ccgtccctcctctgtctc 962694
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 ctcctctgtctcgaagcc 25 |||||||||||||||||| Sbjct: 1434989 ctcctctgtctcgaagcc 1434972
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 81054 tcgaagccgtcaccaccg 81037
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 cctcctctgtctcgaagc 24 |||||||||||||||||| Sbjct: 1125917 cctcctctgtctcgaagc 1125900
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 18771 tcgaagccgtcaccaccg 18754
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 15065002 tcgaagccgtcaccaccg 15064985
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 94581 tcgaagccgtcaccaccg 94564
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 91249 tcgaagccgtcaccaccg 91232
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaagccgtcaccaccgc 36 |||||||||||||||||| Sbjct: 1699944 cgaagccgtcaccaccgc 1699961
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 36968 tcgaagccgtcaccaccg 36951
>dbj|AK105265.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D05, full insert sequence Length = 3749 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 tcgaagccgtcaccaccg 35 |||||||||||||||||| Sbjct: 283 tcgaagccgtcaccaccg 300
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 cctcctctgtctcgaagccgtc 28 |||||||| ||||||||||||| Sbjct: 2006316 cctcctctatctcgaagccgtc 2006337 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 222,609 Number of Sequences: 3902068 Number of extensions: 222609 Number of successful extensions: 63576 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63339 Number of HSP's gapped (non-prelim): 237 length of query: 38 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 18 effective length of database: 17,155,003,908 effective search space: 308790070344 effective search space used: 308790070344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)