>PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)|
           (Phosphorylethanolamine transferase)
           (CTP:phosphoethanolamine cytidylyltransferase)
          Length = 404

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 121 IRFGDGAGGLARVRGASGTEATRRCCVGVY 32
           IR G GAGG A ++G  G    R  C G Y
Sbjct: 2   IRNGHGAGGAAGLKGPGGQRTVRVWCDGCY 31

>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1280

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 8   SKAEILQKINPHAAAPSRLRTTRPPNPSQPAS-AVAEPN 121
           +K   L+ + P  A  +R  TTR P P++PAS  VA P+
Sbjct: 126 AKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGPS 164

>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1281

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 8   SKAEILQKINPHAAAPSRLRTTRPPNPSQPAS-AVAEPN 121
           +K   L+ + P  A  +R  TTR P P++PAS  VA P+
Sbjct: 126 AKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGPS 164

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 39   PTQQRRVASVPLAPRTLASPPAPSPNR 119
            P ++  +A VPLAP    +PP+P+P R
Sbjct: 1129 PPKEGVLAQVPLAPPQPGAPPSPAPAR 1155

>FLIK_ECOLI (P52614) Flagellar hook-length control protein|
          Length = 375

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 5   QSKAEILQKINPHAAAPSRLRTTRPPNPSQPASAVAEP 118
           QSKAE++   +P  AA S L T   P+ +QP   VA P
Sbjct: 195 QSKAEVISTPSPVTAAASPLIT---PHQTQPLPTVAAP 229

>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued) (p135)
          Length = 1278

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 8   SKAEILQKINPHAAAPSRLRTTRPPNPSQPAS 103
           +K   L+ + P  A  +R  TTR P P++PAS
Sbjct: 126 AKTSKLRGLKPKKAPTARKTTTRRPKPTRPAS 157

>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 39   PTQQRRVASVPLAPRTLASPPAPSPNR 119
            P ++  +  VPLAP    +PP+P+P R
Sbjct: 1129 PPKEGTLTQVPLAPPPPGAPPSPAPAR 1155

>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 4) (Class-IV chitin
           synthase 4)
          Length = 1195

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 39  PTQQRRVASVPLAPRTLASPPAPSPN 116
           P+QQ+RV S+   P TL   P+P+PN
Sbjct: 6   PSQQQRVPSISSFPETL---PSPNPN 28

>PHF1_HUMAN (O43189) PHD finger protein 1 (PHF1 protein)|
          Length = 567

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 39  PTQQRRVASVPLAPRTLASPPAPSPNR 119
           P +QR  A +  A +   SPP+PSPN+
Sbjct: 399 PQEQRERAHLQRALQASVSPPSPSPNQ 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.294    0.123    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,862,927
Number of Sequences: 219361
Number of extensions: 168980
Number of successful extensions: 585
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.7 bits)