>S29A1_RAT (O54698) Equilibrative nucleoside transporter 1 (Equilibrative|
           nitrobenzylmercaptopurine riboside-sensitive nucleoside
           transporter) (Equilibrative NBMPR-sensitive nucleoside
           transporter) (Nucleoside transporter, es-type) (Solute
           carrier family
          Length = 456

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = -1

Query: 351 CAIVS------SRVGAIIHACIAVILWICPLLGPPWVPSRRHTIQL 232
           CA+ S      S  G  I AC  VIL I   L  PW+   RH +QL
Sbjct: 192 CAVASGSKLSESAFGYFITACAVVILAILCYLALPWMEFYRHYLQL 237

>DOS_HUMAN (Q8N350) Protein Dos|
          Length = 725

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 361 HPNLRNSKQQGRRHNTCLHRCNPVDLPTARPPVGSESP 248
           HP+ R   Q+GR+H+    R  P    T  PP G+  P
Sbjct: 594 HPHARKQWQRGRQHSDPGARAAPALAGTPAPPAGAARP 631

>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan|
           core protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 329 TLLLTIAQVGVIIPCT*VRMEWKHLPLVPMVTCTA 433
           T+  T   +GV  P    R+ W H+P  P VT T+
Sbjct: 423 TVTFTCVAIGVPTPIINWRLNWGHIPSHPRVTVTS 457

>MCM3_HUMAN (P25205) DNA replication licensing factor MCM3 (DNA polymerase|
           alpha holoenzyme-associated protein P1) (RLF beta
           subunit) (P102 protein) (P1-MCM3)
          Length = 808

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 426 HVTIGTSGRCFHSILTQVHGIITPTCAIVSSRVGAIIHACIA 301
           HV+  T   CF S +  V GI+T  C++V  +V   +H C A
Sbjct: 110 HVSPRTLTSCFLSCVVCVEGIVT-KCSLVRPKVVRSVHYCPA 150

>MCM3_MOUSE (P25206) DNA replication licensing factor MCM3 (DNA polymerase|
           alpha holoenzyme-associated protein P1) (P1-MCM3)
          Length = 812

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 426 HVTIGTSGRCFHSILTQVHGIITPTCAIVSSRVGAIIHACIA 301
           HV+  T   CF S +  V GI+T  C++V  +V   +H C A
Sbjct: 110 HVSPRTLTSCFLSCVVCVEGIVT-KCSLVRPKVVRSVHYCPA 150

>WNTG_DROME (P09615) Protein wingless precursor (Protein Wnt-1) (dWnt-1)|
           (Protein int-1) (dInt-1)
          Length = 468

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = -3

Query: 388 HPDSSTWNNHPNL-----RNSKQQGRRHNTCLHRCNPVDLPTARPP 266
           HP+  + N+ P       RN ++QGR+HN    + NP + P  +PP
Sbjct: 338 HPNMPSPNSLPQAGQRGGRNGRRQGRKHNRYHFQLNPHN-PEHKPP 382

>RS2_YEAST (P25443) 40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent|
           suppressor protein SUP44)
          Length = 253

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 190 APAAKEKATGGLGGKLNGVAATRNPRGAEQ 279
           AP A+++  GG GG+  G    R PR  E+
Sbjct: 2   APEAQQQKRGGFGGRNRGRPNRRGPRNTEE 31

>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan|
           core protein precursor (HSPG) (Perlecan) (PLC)
          Length = 3707

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 296 ITAMQACIMAP---TLLLTIAQVGVIIPCT*VRMEWKHLPLVPMVTCTA 433
           +T  Q  I A    T+  T    GV  P    R+ W H+P  P VT T+
Sbjct: 409 VTPPQQSIQASRGQTVTFTCVATGVPTPIINWRLNWGHIPAHPRVTMTS 457


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,107,936
Number of Sequences: 219361
Number of extensions: 797696
Number of successful extensions: 2042
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2041
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)