ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (U... 30 1.6
2KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-as... 30 2.1
3KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-ass... 29 2.8
4KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-ass... 29 2.8
5KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... 29 2.8
6KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-ass... 29 3.6
7KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-ass... 29 3.6
8KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-as... 28 6.2

>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 69 GCGGAARVCSSSCCWAFLCC 10
          GCG     CSSSCC    CC
Sbjct: 16 GCGSRCGGCSSSCCVPVCCC 35



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 66  CGGAARVCSSSCCWAFLCCL 7
           CGG    C SSCC    CC+
Sbjct: 130 CGGCGSGCGSSCCVPVCCCV 149



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>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated|
           protein 5.11) (Ultrahigh sulfur keratin-associated
           protein 5.11)
          Length = 156

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -1

Query: 120 CAAPLAARGSVRLWTG*GCGGAARVCSSSCCWAFLCC 10
           C +     GS     G GCGG    C SSCC    CC
Sbjct: 10  CGSGCGGCGSGSGGCGSGCGG----CGSSCCVPICCC 42



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>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated|
          protein 5.8) (Ultrahigh sulfur keratin-associated
          protein 5.8) (Keratin, ultra high-sulfur matrix protein
          B) (UHS keratin B) (UHS KerB)
          Length = 187

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 69 GCGGAARVCSSSCCWAFLCC 10
          GCG     C SSCC    CC
Sbjct: 16 GCGSGCGGCGSSCCVPICCC 35



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>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated|
          protein 5.4) (Ultrahigh sulfur keratin-associated
          protein 5.4)
          Length = 288

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 69 GCGGAARVCSSSCCWAFLCC 10
          GCG     C SSCC    CC
Sbjct: 37 GCGSGCGGCGSSCCVPICCC 56



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>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated|
          protein 5.6) (Ultrahigh sulfur keratin-associated
          protein 5.6)
          Length = 129

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 69 GCGGAARVCSSSCCWAFLCC 10
          GCG     C SSCC    CC
Sbjct: 16 GCGSGCGGCGSSCCVPICCC 35



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>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein|
           5.1) (Ultrahigh sulfur keratin-associated protein 5.1)
          Length = 278

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 69  GCGGAARVCSSSCCWAFLCC 10
           GCG     C SSCC    CC
Sbjct: 118 GCGSGCGGCGSSCCVPVCCC 137



 Score = 27.7 bits (60), Expect = 8.1
 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
 Frame = -1

Query: 120 CAAPLAARGSVRLWTG*GCGGAARVCS---SSCCWAFLCC 10
           C +     GS     G GCGG    C    SSCC    CC
Sbjct: 10  CGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCC 49



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>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated|
          protein 5.7) (Ultrahigh sulfur keratin-associated
          protein 5.7) (Keratin-associated protein 5-3)
          (Keratin-associated protein 5.3)
          Length = 165

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 69 GCGGAARVCSSSCCWAFLCC 10
          GCG     C SSCC    CC
Sbjct: 23 GCGSGCGGCGSSCCVPVCCC 42



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>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated|
          protein 5.10) (Ultrahigh sulfur keratin-associated
          protein 5.10)
          Length = 202

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 75 G*GCGGAARVCSSSCCWAFLCC 10
          G GCGG    C SSCC    CC
Sbjct: 32 GSGCGG----CGSSCCVPVCCC 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.307    0.116    0.320 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,047,333
Number of Sequences: 219361
Number of extensions: 313726
Number of successful extensions: 938
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
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