ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41h10 |
|---|---|
| Clone Library Name | barley_pub |
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 34.3 bits (77), Expect = 0.079 Identities = 22/61 (36%), Positives = 27/61 (44%) Frame = +1 Query: 40 PSSTATTTYRP*HAAPCMPYCTRPQAKRRS*SRHQARGVMAMAPSSTATCATSLHFPHPS 219 P AT+TYRP H + Y P + RR Q A P S+ TSL+ P P Sbjct: 159 PPPAATSTYRPPHGSNYDNYGREPASSRRPYPPQQPPSTSA--PHSSPNNRTSLYNPQPP 216 Query: 220 P 222 P Sbjct: 217 P 217
>STAR9_HUMAN (Q9P2P6) StAR-related lipid transfer protein 9 (StARD9) (START| domain-containing protein 9) (Fragment) Length = 1820 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 108 TTSEAEELKPAPSSRRDGDGTFVHRHLRHIPPLSPPVSALEY 233 T+ +AE+ SSR D DGT HRHL+ P P S L + Sbjct: 495 TSLQAEDSDQKASSRLD-DGTTDHRHLKPATPPYPMPSTLSH 535
>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)| Length = 5045 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +3 Query: 81 GAVHAILH*TTSEAEELKPAPSSRRDGDGTFVHRHLRHIPPLSPPVSALE 230 G++H +LH TS+ E K SS GD F+ H+ P+ P V+ LE Sbjct: 2373 GSIHPLLHQNTSDFSEQK--FSSVFTGDEFFLRDHVVRGKPVLPGVAYLE 2420
>Y116_ADE02 (P03287) Hypothetical 11.6 kDa early protein| Length = 106 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -1 Query: 330 SPQRRALCLTASPPLQPATAPAGELDVAD----ATADTPGRRRVGK 205 SP+RR+L PPL+ +G V+ +T TPG RR K Sbjct: 61 SPRRRSLVQQRRPPLREQNGGSGSSCVSSGGSASTVKTPGSRRASK 106
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 29.3 bits (64), Expect = 2.5 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Frame = +3 Query: 45 IHGHNNLSPIARGAVHAILH*TTSEAEELKPAPSSRRDGDGTFVHR--HLRHIPPLSPPV 218 +HG +L P+ G+ + L S AE L +R G+G+ R + H+ P Sbjct: 848 LHGTGSLPPL--GSWRSGL----SRAESL-----ARGGGEGSMATRPSNANHLSP----- 891 Query: 219 SALEYQQWRRPRPVLPPALS 278 AL+++++RR P+ PP LS Sbjct: 892 QALKWREYRRKNPLGPPGLS 911
>IMPA1_CAEEL (Q19420) Probable inositol monophosphatase (EC 3.1.3.25) (IMPase)| (IMP) (Inositol-1(or 4)-monophosphatase) Length = 341 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Frame = -2 Query: 230 LQGGDGWGKWRDVAQVAVDEGAIAITPRAWCR----LQLLRFAC-GLVQYGMH 87 +Q GD +W D+AQ + +A TP W R + + + +C G V+YG+H Sbjct: 234 VQFGD---RWLDIAQSNMRNQVMAGTPFVWLRAINMVMVAQGSCDGYVEYGIH 283
>AROC_PROAC (Q6A8I4) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 398 Score = 24.3 bits (51), Expect(2) = 3.5 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -3 Query: 193 WRRWRWTKVPSPSRRELGAGFSSSASL 113 W +WR P P E AG + +A+L Sbjct: 82 WEKWRTVMAPGPVAPEDLAGHARAAAL 108 Score = 23.1 bits (48), Expect(2) = 3.5 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = -2 Query: 266 RENWTWPTPLLILQGGDGWGKWRDV 192 R T PL I G W KWR V Sbjct: 64 RHGETLGDPLAIRIGNSEWEKWRTV 88
>ACK1_MOUSE (O54967) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1)| (Non-receptor protein tyrosine kinase Ack) (Tyrosine kinase non-receptor protein 2) Length = 1055 Score = 28.5 bits (62), Expect = 4.3 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Frame = +3 Query: 126 ELKPAPS-----SRRDGDGTFVHRHLRHIPPLSPPVSALEYQQWRRPRPVLPPALS 278 EL PAPS SR G + PP PP L Q R P P++PP S Sbjct: 770 ELSPAPSGEEETSRWPGPAS---------PPRVPPREPLSPQGSRTPSPLVPPGSS 816
>RGP2_CAEEL (P34342) Ran GTPase-activating protein 2 (Ran nuclear| import/export-related protein 2) (RanGAP) Length = 960 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 9/38 (23%) Frame = +3 Query: 177 HRHLRHI----PPLSPPVSALEYQQWRR-----PRPVL 263 HRHL+++ L+PPV+ L Q+W + P+PVL Sbjct: 721 HRHLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVL 758
>MILK2_HUMAN (Q8IY33) MICAL-like protein 2| Length = 904 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +1 Query: 106 RPQAKRRS*SRHQARGVMAMAPSSTATCATSLHFPHPSPP 225 RP A + AR + AP+ AT ATS+H P+ P Sbjct: 283 RPSAWEPAAGNSPARASVPAAPNPAATSATSVHVRSPARP 322
>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2| Length = 1514 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +3 Query: 150 RRDGDGTFVHR--HLRHIPPLSPPVSALEYQQWRRPRPVLPPALS 278 R G+G+ +R + H+ P AL+++++RR P+ PP LS Sbjct: 867 RGGGEGSMANRPNNANHLSP-----QALKWREYRRKNPLGPPGLS 906
>B3A4_HUMAN (Q96Q91) Anion exchange protein 4 (Anion exchanger 4) (Solute| carrier family 4 member 9) (Sodium bicarbonate cotransporter 5) Length = 983 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +2 Query: 44 HPRPQQPIAHSTRRRACHTALDHKRSGGAEAGTKLA 151 HPR + R C L K GAEAGT LA Sbjct: 196 HPRKASDNEEAPLREQCQNPLRQKLPPGAEAGTVLA 231
>ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U| twenty twenty) Length = 1651 Score = 28.1 bits (61), Expect = 5.7 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +3 Query: 108 TTSEAEELKPAPSSRRDGDGTFVHRHLRHIPPLSPPVSALEYQQWRRPRPVLPP 269 T S EEL+P + G H+ R P+SPP PRP+ PP Sbjct: 1264 TPSPQEELQPMLQDCPEETGHMQHQPDRRRQPVSPPPP---------PRPISPP 1308
>ZIMP7_MOUSE (Q8CIE2) PIAS-like protein Zimp7| Length = 920 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/70 (30%), Positives = 27/70 (38%) Frame = +1 Query: 13 PRCSFTDLVPSSTATTTYRP*HAAPCMPYCTRPQAKRRS*SRHQARGVMAMAPSSTATCA 192 P S+ +PSS T P + PC+P P H P+ T Sbjct: 779 PPISYQSDIPSSLLT----PDKSTPCLPGQMAPAGHLDP--AHNPGPPGLHTPNLGPTPG 832 Query: 193 TSLHFPHPSP 222 T LH P+PSP Sbjct: 833 TQLHHPNPSP 842
>NFE2_HUMAN (Q16621) Transcription factor NF-E2 45 kDa subunit (Nuclear factor,| erythroid-derived 2 45 kDa subunit) (p45 NF-E2) (Leucine zipper protein NF-E2) Length = 373 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%) Frame = +1 Query: 169 PSSTATCATSLH----FPHPSPPWSISSGVGHV 255 P T C S+H FP P PP+ + + HV Sbjct: 60 PPPTTYCPCSIHPDSGFPLPPPPYELPASTSHV 92
>ALR2_SALTY (P06191) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 356 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 260 NWTWPTPLLILQGGDGWGKWRDVAQVAV 177 ++ W P +IL G G+WRD+A + Sbjct: 202 HYDWVRPGIILYGASPSGQWRDIADTGL 229
>ALR2_SALTI (Q8Z688) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 356 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 260 NWTWPTPLLILQGGDGWGKWRDVAQVAV 177 ++ W P +IL G G+WRD+A + Sbjct: 202 HYDWVRPGIILYGASPSGQWRDIADTGL 229
>CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein cbiO 1| Length = 563 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Frame = -2 Query: 329 PPSAARCASPHPRLCSPRQRRR----ENWTWPTP 240 PPSA A P PR + R RRR EN + PTP Sbjct: 281 PPSAPLPAPPAPRPVTSRWRRRGKRPENPSAPTP 314
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = +1 Query: 40 PSSTATTTYRP*HAAPCMPYCTRPQAKRRS*SRHQARGVMAMAPSSTATCATSLHFPHPS 219 PS + TT+ P P P+ T P S AP+ T+ T+ P P Sbjct: 215 PSHSTTTSGPPTAPTPTSPFGTAPMVLSSS----STSSGPPTAPTPTSPFGTAPMPPGPP 270 Query: 220 PPWSIS 237 PP ++S Sbjct: 271 PPGTVS 276
>SURE_SALTY (P66881) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -2 Query: 314 RCASPHPR-LCSPRQRRREN---WTWPTPLLILQGGDGWGKWRDVAQVAVDEGAIAITP 150 RC S HP P++ R N W P GD + D AVDEG +++TP Sbjct: 175 RCGSRHPADKVIPQEDPRGNTLYWIGPP-------GDKYDAGPDTDFAAVDEGYVSVTP 226
>SURE_SALTI (P66882) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -2 Query: 314 RCASPHPR-LCSPRQRRREN---WTWPTPLLILQGGDGWGKWRDVAQVAVDEGAIAITP 150 RC S HP P++ R N W P GD + D AVDEG +++TP Sbjct: 175 RCGSRHPADKVIPQEDPRGNTLYWIGPP-------GDKYDAGPDTDFAAVDEGYVSVTP 226
>SURE_SALPA (Q5PEG4) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -2 Query: 314 RCASPHPR-LCSPRQRRREN---WTWPTPLLILQGGDGWGKWRDVAQVAVDEGAIAITP 150 RC S HP P++ R N W P GD + D AVDEG +++TP Sbjct: 175 RCGSRHPADKVIPQEDPRGNTLYWIGPP-------GDKYDAGLDTDFAAVDEGYVSVTP 226
>SURE_SALCH (Q57KJ7) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -2 Query: 314 RCASPHPR-LCSPRQRRREN---WTWPTPLLILQGGDGWGKWRDVAQVAVDEGAIAITP 150 RC S HP P++ R N W P GD + D AVDEG +++TP Sbjct: 175 RCGSRHPADKVIPQEDPRGNTLYWIGPP-------GDKYDAGPDTDFAAVDEGYVSVTP 226
>ALR2_ECOLI (P29012) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 356 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 260 NWTWPTPLLILQGGDGWGKWRDVAQVAV 177 ++ W P +IL G G+WRD+A + Sbjct: 202 HFDWVRPGIILYGASPSGQWRDIANTGL 229
>ALR2_ECOL6 (P59237) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 356 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 260 NWTWPTPLLILQGGDGWGKWRDVAQVAV 177 ++ W P +IL G G+WRD+A + Sbjct: 202 HFDWVRPGIILYGASPSGQWRDIANTGL 229
>ALR2_ECO57 (Q8X4I9) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 356 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 260 NWTWPTPLLILQGGDGWGKWRDVAQVAV 177 ++ W P +IL G G+WRD+A + Sbjct: 202 HFDWVRPGIILYGASPSGQWRDIANTGL 229
>VNCA_MSTV (P22175) Major noncapsid protein (NCP)| Length = 176 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Frame = +2 Query: 8 LILVVLSPTSFHHPRPQQPIAHSTRRRA---CHTALDHKRSG 124 LIL T++HHP P+ S + CH+ L+H G Sbjct: 50 LILKGCVETAYHHPLETDPLFASVHKHLPDFCHSFLEHLLGG 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,974,602 Number of Sequences: 219361 Number of extensions: 1062759 Number of successful extensions: 4349 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4018 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4343 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
