>VG28_BPMU (Q9T1W6) Protein gp28|
          Length = 551

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 206 PGREIQIRRFRGSERYSRVTSQSRHGLLQ 292
           P R+I + RF   + +  +T Q RHG++Q
Sbjct: 301 PARDIPVLRFEAPDDFESLTPQMRHGIVQ 329

>MENF_PASMU (Q9CPI5) Menaquinone-specific isochorismate synthase (EC 5.4.4.2)|
           (Isochorismate mutase)
          Length = 431

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 319 ADQVEWCLWLQQPMARLR 266
           ADQ EWC W++Q + +++
Sbjct: 160 ADQAEWCRWVEQGLQKIK 177

>MRS3_YEAST (P10566) Mitochondrial RNA-splicing protein MRS3|
          Length = 314

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 98  VLKESSFRYSSPEFSMTPVVHCSVGTIS 181
           V+ ESS ++ +P     P++HC  G+IS
Sbjct: 202 VIYESSTKFLNPSNEYNPLIHCLCGSIS 229

>DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 373

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 305 FHLISMYKRSWSSANNRLRTLSAAAVETDVA 397
           F  ISMY R W++      TL AA V+T +A
Sbjct: 337 FTTISMYPRMWAAGGIDYPTLLAAMVDTAIA 367

>Y382_RHIME (P25885) Probable ABC transporter ATP-binding protein R00382|
          Length = 270

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 174 PSACST*AASGPAEKYR*EGSVVQRGIQESHRSR 275
           PSA +  AA+   +K R +G+++ RG+ +S+RSR
Sbjct: 15  PSAAA--AAARAVDKARYDGTLIARGLTKSYRSR 46

>TBP_DROVI (Q9NHP5) TATA-box-binding protein (TATA-box factor) (TATA-binding|
           factor) (TATA sequence-binding protein) (Transcription
           initiation factor TFIID TBP subunit)
          Length = 349

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 173 TISLFHIGSFRPGREIQIRRFRGSERYSRVTSQSRHGLLQPQTPFHLIS 319
           +I L H  S++P    Q ++ +   + S     +   L+QPQTP  ++S
Sbjct: 83  SIPLAHKQSYQPSASYQQQQQQQQNQSSNTGGTTPQSLMQPQTPQSMMS 131

>DDL_MYCTU (P95114) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 373

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 305 FHLISMYKRSWSSANNRLRTLSAAAVETDVA 397
           F  ISMY R W+++     TL A  +ET +A
Sbjct: 337 FTTISMYPRMWAASGVDYPTLLATMIETTLA 367

>YR46_CAEEL (Q09391) Hypothetical protein F47D12.6|
          Length = 100

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 163 LCWHHQPVPHRQLQARPRNTDKKVPWFREVFKSHIXXXXXXXXXTDTIPPDQHV 324
           +C+  +    R+L   P NT + +P+ R V K +             +PP QHV
Sbjct: 47  ICYFIRQRRRRELIDYPSNTLQYIPFPRNVRKPYRTESGTSSSNRMMLPPRQHV 100

>IFI4_MOUSE (P15092) Interferon-activable protein 204 (Ifi-204)|
           (Interferon-inducible protein p204)
          Length = 640

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 116 FRYSSPEFSMTPVVHCSVGTIS-LFHIGSF 202
           F Y SPE  +  ++H +V T+S  FH+  F
Sbjct: 261 FEYESPEHEVKNMLHATVATVSQYFHVKVF 290

>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 77  LAVAPTRVLKESSFRYSSPEFSMTPVVH 160
           L ++PT   KE++F+    EF++ PVVH
Sbjct: 670 LLISPTVNEKENNFKEGVIEFTLPPVVH 697

>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 77  LAVAPTRVLKESSFRYSSPEFSMTPVVH 160
           L ++PT   KE++F+    EF++ PVVH
Sbjct: 670 LLISPTVNEKENNFKEGVIEFTLPPVVH 697


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,720,042
Number of Sequences: 219361
Number of extensions: 919188
Number of successful extensions: 2061
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)