Clone Name | bastl41g06 |
---|---|
Clone Library Name | barley_pub |
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 ccagagcncgatccacctccgcc 23 ||||||| ||||||||||||||| Sbjct: 45304 ccagagctcgatccacctccgcc 45326
>ref|XM_541589.2| PREDICTED: Canis familiaris similar to capicua homolog (LOC484475), mRNA Length = 8171 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cccacacgccgacgccctcc 63 |||||||||||||||||||| Sbjct: 1982 cccacacgccgacgccctcc 2001
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 ccagagcncgatccacctccgcc 23 ||||||| ||||||||||||||| Sbjct: 9951523 ccagagctcgatccacctccgcc 9951545
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 ccagagcncgatccacctccgcc 23 ||||||| ||||||||||||||| Sbjct: 10023220 ccagagctcgatccacctccgcc 10023242
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 cacgccgacgccctccggc 66 ||||||||||||||||||| Sbjct: 636668 cacgccgacgccctccggc 636650
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 gccgacgccctccggcgcg 69 ||||||||||||||||||| Sbjct: 3901151 gccgacgccctccggcgcg 3901169
>dbj|AB164632.1| Streptomyces griseus AdBS3 gene cluster (orf1-AdBS3, orfA-AdBS3, orfB-AdBS3), complete cds Length = 3987 Score = 38.2 bits (19), Expect = 4.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 gccgacgccctccggcgcg 69 ||||||||||||||||||| Sbjct: 3195 gccgacgccctccggcgcg 3177
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 38.2 bits (19), Expect = 4.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 49 acgccgacgccctccggcgcggg 71 ||||||||||| ||||||||||| Sbjct: 758965 acgccgacgccttccggcgcggg 758987 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 309,161 Number of Sequences: 3902068 Number of extensions: 309161 Number of successful extensions: 22966 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22855 Number of HSP's gapped (non-prelim): 111 length of query: 98 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 77 effective length of database: 17,151,101,840 effective search space: 1320634841680 effective search space used: 1320634841680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)