ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 264 9e-68
2ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 115 5e-23
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 5e-23
4emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 115 5e-23
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 115 5e-23
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 5e-23
7dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 5e-23
8ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 78 1e-11
9gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 78 1e-11
10gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 78 1e-11
11gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 76 4e-11
12gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 76 4e-11
13gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 76 4e-11
14gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 70 3e-09
15gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 70 3e-09
16gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 68 1e-08
17gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of... 44 0.15
18ref|NM_003028.1| Homo sapiens Src homology 2 domain containing a... 42 0.59
19emb|X75342.1|HSSHB H.sapiens SHB mRNA 42 0.59
20gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
21gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 40 2.3
22emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 2.3
23emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 2.3
24dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.3
25dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 2.3
26dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.3
27gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 2.3
28gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complet... 38 9.3
29gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 38 9.3
30ref|XM_369540.1| Magnaporthe grisea 70-15 chromosome III predict... 38 9.3
31gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 38 9.3
32gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 38 9.3
33ref|XM_391393.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 38 9.3
34emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment ... 38 9.3
35emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in... 38 9.3
36emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in... 38 9.3
37gb|AF375824.1|AF375824 Chlamydomonas reinhardtii mating type pro... 38 9.3
38emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 38 9.3

>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  264 bits (133), Expect = 9e-68
 Identities = 173/181 (95%), Gaps = 4/181 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 60
           |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 4   acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60

                                                                       
Query: 61  gaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 120
            |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 61  -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119

                                                                       
Query: 121 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 179

            
Query: 181 c 181
           |
Sbjct: 180 c 180



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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  115 bits (58), Expect = 5e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 42  cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101

                         
Query: 175 cggcgccaccgtca 188
           ||||||||||||||
Sbjct: 102 cggcgccaccgtca 115



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 5e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 115      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360

                              
Query: 175      cggcgccaccgtca 188
                ||||||||||||||
Sbjct: 30023361 cggcgccaccgtca 30023374



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27798757 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27798816

                       
Query: 182      accgtca 188
                |||||||
Sbjct: 27798817 accgtca 27798823



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ggcgtcggcggcatcgtgag 90
                ||||||||||||||||||||
Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052



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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  115 bits (58), Expect = 5e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198

                         
Query: 175 cggcgccaccgtca 188
           ||||||||||||||
Sbjct: 199 cggcgccaccgtca 212



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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  115 bits (58), Expect = 5e-23
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                         
Query: 115   cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
             ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391

                           
Query: 175   cggcgccaccgtca 188
             ||||||||||||||
Sbjct: 84390 cggcgccaccgtca 84377



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 5e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 115      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782

                              
Query: 175      cggcgccaccgtca 188
                ||||||||||||||
Sbjct: 30114783 cggcgccaccgtca 30114796



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27890081 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27890140

                       
Query: 182      accgtca 188
                |||||||
Sbjct: 27890141 accgtca 27890147



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ggcgtcggcggcatcgtgag 90
                ||||||||||||||||||||
Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375



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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  115 bits (58), Expect = 5e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 174
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216

                         
Query: 175 cggcgccaccgtca 188
           ||||||||||||||
Sbjct: 217 cggcgccaccgtca 230



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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 111

                  
Query: 182 accgtca 188
           |||||||
Sbjct: 112 accgtca 118



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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 122   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 42887 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 42946

                    
Query: 182   accgtca 188
             |||||||
Sbjct: 42947 accgtca 42953



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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                         
Query: 122   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 15136 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 15077

                    
Query: 182   accgtca 188
             |||||||
Sbjct: 15076 accgtca 15070



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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 200 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 259

                 
Query: 182 accgtc 187
           ||||||
Sbjct: 260 accgtc 265



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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 111

                 
Query: 182 accgtc 187
           ||||||
Sbjct: 112 accgtc 117



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>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 114 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 173

                 
Query: 182 accgtc 187
           ||||||
Sbjct: 174 accgtc 179



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>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                        
Query: 122  ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
            ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 3566 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 3625

               
Query: 182  acc 184
            |||
Sbjct: 3626 acc 3628



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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 181
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182

              
Query: 182 acc 184
           |||
Sbjct: 183 acc 185



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>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 146 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtc 187
           ||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtc 42



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>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome
          Length = 8803

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 154  cgcgctcgacttcaacgacttcggcg 179
            ||||| ||||||||||||||||||||
Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494



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>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B
           (SHB), mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  cggggggcctccggggcgccc 119
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449



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>emb|X75342.1|HSSHB H.sapiens SHB mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  cggggggcctccggggcgccc 119
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449



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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ggcgtcggcggcatcgtgag 90
             ||||||||||||||||||||
Sbjct: 52268 ggcgtcggcggcatcgtgag 52287



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>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     cggcggcatcgtgagcgacctgac 99
              ||||||||||| ||||||||||||
Sbjct: 205636 cggcggcatcgagagcgacctgac 205659



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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    cggcggcatcgtgagcgacctgac 99
             ||||||||||| ||||||||||||
Sbjct: 80122 cggcggcatcgagagcgacctgac 80099



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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ggcgtcggcggcatcgtgag 90
              ||||||||||||||||||||
Sbjct: 103984 ggcgtcggcggcatcgtgag 104003



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 71      ggcgtcggcggcatcgtgagcgac 94
               |||||||||||||||||| |||||
Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     ggcgtcggcggcatcgtgagcgac 94
              |||||||||||||||||| |||||
Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    tgcgcaagaacgcgctcgacttca 167
              ||||||||||| ||||||||||||
Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773



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>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  ggcgtcggcggcatcgtgag 90
           ||||||||||||||||||||
Sbjct: 613 ggcgtcggcggcatcgtgag 594



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     ggcgtcggcggcatcgtgagcgac 94
              |||||||||||||||||| |||||
Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756



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>gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complete sequence
          Length = 187392

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 94     cctgacggggggcctccgg 112
              |||||||||||||||||||
Sbjct: 106900 cctgacggggggcctccgg 106882



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 71      ggcgtcggcggcatcgtga 89
               |||||||||||||||||||
Sbjct: 3161120 ggcgtcggcggcatcgtga 3161102



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>ref|XM_369540.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG05924.4)
            partial mRNA
          Length = 1686

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 73   cgtcggcggcatcgtgagc 91
            |||||||||||||||||||
Sbjct: 1401 cgtcggcggcatcgtgagc 1419



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 124     caagggctccgtcgtcctc 142
               |||||||||||||||||||
Sbjct: 3701605 caagggctccgtcgtcctc 3701623



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 163     cttcaacgacttcggcgcc 181
               |||||||||||||||||||
Sbjct: 2718280 cttcaacgacttcggcgcc 2718298



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>ref|XM_391393.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11217.1)
           partial mRNA
          Length = 1107

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 caagggctccgtcgtcctc 142
           |||||||||||||||||||
Sbjct: 30  caagggctccgtcgtcctc 48



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>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24
          Length = 303250

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 77     ggcggcatcgtgagcgacc 95
              |||||||||||||||||||
Sbjct: 116763 ggcggcatcgtgagcgacc 116745



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>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21,
             complete sequence
          Length = 168569

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     acacagcagcaccacagcg 19
             |||||||||||||||||||
Sbjct: 55970 acacagcagcaccacagcg 55952



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>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21,
             complete sequence
          Length = 179432

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     acacagcagcaccacagcg 19
             |||||||||||||||||||
Sbjct: 95885 acacagcagcaccacagcg 95867



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>gb|AF375824.1|AF375824 Chlamydomonas reinhardtii mating type protein Mat3p (mat3) gene,
            complete cds
          Length = 7056

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 169  cgacttcggcgccaccgtc 187
            |||||||||||||||||||
Sbjct: 4151 cgacttcggcgccaccgtc 4169



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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 136    cgtcctcatgcgcaagaacgcgc 158
              ||||||||||| |||||||||||
Sbjct: 859782 cgtcctcatgctcaagaacgcgc 859760


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 917,779
Number of Sequences: 3902068
Number of extensions: 917779
Number of successful extensions: 65186
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64174
Number of HSP's gapped (non-prelim): 1009
length of query: 188
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 166
effective length of database: 17,147,199,772
effective search space: 2846435162152
effective search space used: 2846435162152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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