ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EGFL8_MOUSE (Q6GUQ1) EGF-like domain-containing protein 8 precur... 29 2.6
2YRM8_CAEEL (Q09417) Hypothetical WD-repeat protein R06F6.8 28 5.8
3EGFL8_RAT (Q6MG84) EGF-like domain-containing protein 8 precurso... 28 7.5
4C71BL_ARATH (Q9LTM2) Cytochrome P450 71B21 (EC 1.14.-.-) 27 9.8

>EGFL8_MOUSE (Q6GUQ1) EGF-like domain-containing protein 8 precursor (Epidermal|
           growth factor-like protein 8) (Multiple EGF-like domain
           protein 8)
          Length = 293

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 132 EVRVQVARGCRWVKESGAWLSEKTPLVPSRLRSLQ 28
           E+R ++ +  +W K++GAW+    P+ P  LR  Q
Sbjct: 218 ELRGRLEKLEQWAKQAGAWVRAVLPMPPEELRPEQ 252



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>YRM8_CAEEL (Q09417) Hypothetical WD-repeat protein R06F6.8|
          Length = 1470

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 6    FLRAPPFSGDFGVSRAPTASSPRA 77
            F R PP S    +SR PT SSP A
Sbjct: 975  FFRTPPPSAKTSLSRRPTVSSPSA 998



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>EGFL8_RAT (Q6MG84) EGF-like domain-containing protein 8 precursor (Epidermal|
           growth factor-like protein 8) (Multiple EGF-like domain
           protein 8)
          Length = 291

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 132 EVRVQVARGCRWVKESGAWLSEKTPLVPSRLRSLQ 28
           E+R ++ R  +W  ++GAW+    P+ P  LR  Q
Sbjct: 216 ELRGRLERLEQWATQAGAWVRAVLPVAPEDLRPEQ 250



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>C71BL_ARATH (Q9LTM2) Cytochrome P450 71B21 (EC 1.14.-.-)|
          Length = 499

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 62  VFSESQAPDSLTHRHPRATCTRTSVSAT 145
           VFS  +A + +   H   TCTR  +SAT
Sbjct: 74  VFSTKEAAEEVLKTHDLETCTRPKLSAT 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,450,542
Number of Sequences: 219361
Number of extensions: 449802
Number of successful extensions: 1504
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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