Clone Name | bastl41f12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MOAC_RHOCA (Q9X5W6) Molybdenum cofactor biosynthesis protein C (... | 28 | 8.2 | 2 | HELS_HALSA (Q9HMV6) Putative ski2-type helicase (EC 3.6.1.-) | 28 | 8.2 | 3 | ACL3_AGKAC (P60244) Acutolysin-C (EC 3.4.24.-) (Hemorrhagin III) | 28 | 8.2 |
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>MOAC_RHOCA (Q9X5W6) Molybdenum cofactor biosynthesis protein C (Fragment)| Length = 77 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 33 KQGKGNDVGVALVKTLQNTKYSLDEKLDQSFINFFGRRPAAQS 161 + GKG+ +G+A V + K + D K +SF RP A S Sbjct: 34 RAGKGDVLGIARVAGIMAAKRTADPKNSKSFSRVLLERPRAHS 76
>HELS_HALSA (Q9HMV6) Putative ski2-type helicase (EC 3.6.1.-)| Length = 783 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/80 (27%), Positives = 37/80 (46%) Frame = +3 Query: 12 DDNNASKKQGKGNDVGVALVKTLQNTKYSLDEKLDQSFINFFGRRPAAQSEDSDMTGNAI 191 D A G G+ + TL + +L F+N A+ +D+TGNA+ Sbjct: 229 DGTQAELSVGSGSQTAAVVADTLADDGSTL------VFVNSRRNAEASARRLADVTGNAL 282 Query: 192 SSRQNDQGDANILAQVGGNS 251 SS + ++ A+I A++ G S Sbjct: 283 SSAERER-LADIAAEIRGVS 301
>ACL3_AGKAC (P60244) Acutolysin-C (EC 3.4.24.-) (Hemorrhagin III)| Length = 197 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 45 GNDVGVALVKTLQNTKYSLDEKLDQSFI 128 GN VG+A +KT+ N+KYS+ D S I Sbjct: 104 GNTVGLAYLKTMCNSKYSVGLIQDHSAI 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,865,557 Number of Sequences: 219361 Number of extensions: 856658 Number of successful extensions: 2172 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2170 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)