ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 9e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 288 tcttcttccgagtgctctagtgatagtgaaggtgacaatgatgatgacattcagccaagt 347 |||| ||| |||||||| || ||||||||| ||| |||||||| | | ||||| || | Sbjct: 12274408 tcttattctgagtgctccagcgatagtgaacatgataatgatgaagcaactcagcaaaat 12274467 Query: 348 gatcttggcgttgacttgagagaagaagtggaattttgcaatggaagaatgaggcgaaaa 407 || | || |||| |||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 12274468 gaccatgaagttggcttgagagaagaggtggaattttgcaatggaaggatgaggagaaaa 12274527 Query: 408 gctgtgtcagctaattttcaagatgatgacgatgatg 444 ||||| |||||||||||| |||||||||||||||||| Sbjct: 12274528 gctgtatcagctaattttaaagatgatgacgatgatg 12274564 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 38 agggaaaggtaatgatgttggtgtggctctagtaaaaactcttcagaacaccaagtactc 97 ||||||||| | ||||||||||| | ||||||||||| ||||||||| ||| || || Sbjct: 12274179 agggaaaggacaggatgttggtgtaaccctagtaaaaacacttcagaaccccagatattc 12274238 Query: 98 ccttgatgagaagctagatcagagttttataaatttcttcggcagacggcctgctgctca 157 |||| |||| ||| | |||||||||||||||||||| || || ||| |||||||||||| Sbjct: 12274239 ccttaatgaaaagttggatcagagttttataaatttatttggtagaaagcctgctgctca 12274298 Query: 158 gtccgaagaca 168 ||||||||||| Sbjct: 12274299 gtccgaagaca 12274309 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 201 cagaatgaccaaggagatgctaacattttggcacaagtaggtggtaata 249 |||||||| || ||||||||||| ||||||| | ||| || |||||||| Sbjct: 12274321 cagaatgatcagggagatgctaatattttggaagaagcagatggtaata 12274369 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 gaaggtgacaatgatgatgacatt 338 |||| ||||||||||||||||||| Sbjct: 18487858 gaagatgacaatgatgatgacatt 18487835 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 665691 ttcaagatgatgatgatgatgatgatga 665664
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 9e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 288 tcttcttccgagtgctctagtgatagtgaaggtgacaatgatgatgacattcagccaagt 347 |||| ||| |||||||| || ||||||||| ||| |||||||| | | ||||| || | Sbjct: 12271171 tcttattctgagtgctccagcgatagtgaacatgataatgatgaagcaactcagcaaaat 12271230 Query: 348 gatcttggcgttgacttgagagaagaagtggaattttgcaatggaagaatgaggcgaaaa 407 || | || |||| |||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 12271231 gaccatgaagttggcttgagagaagaggtggaattttgcaatggaaggatgaggagaaaa 12271290 Query: 408 gctgtgtcagctaattttcaagatgatgacgatgatg 444 ||||| |||||||||||| |||||||||||||||||| Sbjct: 12271291 gctgtatcagctaattttaaagatgatgacgatgatg 12271327 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 38 agggaaaggtaatgatgttggtgtggctctagtaaaaactcttcagaacaccaagtactc 97 ||||||||| | ||||||||||| | ||||||||||| ||||||||| ||| || || Sbjct: 12270942 agggaaaggacaggatgttggtgtaaccctagtaaaaacacttcagaaccccagatattc 12271001 Query: 98 ccttgatgagaagctagatcagagttttataaatttcttcggcagacggcctgctgctca 157 |||| |||| ||| | |||||||||||||||||||| || || ||| |||||||||||| Sbjct: 12271002 ccttaatgaaaagttggatcagagttttataaatttatttggtagaaagcctgctgctca 12271061 Query: 158 gtccgaagaca 168 ||||||||||| Sbjct: 12271062 gtccgaagaca 12271072 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 201 cagaatgaccaaggagatgctaacattttggcacaagtaggtggtaata 249 |||||||| || ||||||||||| ||||||| | ||| || |||||||| Sbjct: 12271084 cagaatgatcagggagatgctaatattttggaagaagcagatggtaata 12271132 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 gaaggtgacaatgatgatgacatt 338 |||| ||||||||||||||||||| Sbjct: 18481899 gaagatgacaatgatgatgacatt 18481876 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 665689 ttcaagatgatgatgatgatgatgatga 665662
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 129 bits (65), Expect = 9e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 288 tcttcttccgagtgctctagtgatagtgaaggtgacaatgatgatgacattcagccaagt 347 |||| ||| |||||||| || ||||||||| ||| |||||||| | | ||||| || | Sbjct: 43941 tcttattctgagtgctccagcgatagtgaacatgataatgatgaagcaactcagcaaaat 44000 Query: 348 gatcttggcgttgacttgagagaagaagtggaattttgcaatggaagaatgaggcgaaaa 407 || | || |||| |||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 44001 gaccatgaagttggcttgagagaagaggtggaattttgcaatggaaggatgaggagaaaa 44060 Query: 408 gctgtgtcagctaattttcaagatgatgacgatgatg 444 ||||| |||||||||||| |||||||||||||||||| Sbjct: 44061 gctgtatcagctaattttaaagatgatgacgatgatg 44097 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 38 agggaaaggtaatgatgttggtgtggctctagtaaaaactcttcagaacaccaagtactc 97 ||||||||| | ||||||||||| | ||||||||||| ||||||||| ||| || || Sbjct: 43712 agggaaaggacaggatgttggtgtaaccctagtaaaaacacttcagaaccccagatattc 43771 Query: 98 ccttgatgagaagctagatcagagttttataaatttcttcggcagacggcctgctgctca 157 |||| |||| ||| | |||||||||||||||||||| || || ||| |||||||||||| Sbjct: 43772 ccttaatgaaaagttggatcagagttttataaatttatttggtagaaagcctgctgctca 43831 Query: 158 gtccgaagaca 168 ||||||||||| Sbjct: 43832 gtccgaagaca 43842 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 201 cagaatgaccaaggagatgctaacattttggcacaagtaggtggtaata 249 |||||||| || ||||||||||| ||||||| | ||| || |||||||| Sbjct: 43854 cagaatgatcagggagatgctaatattttggaagaagcagatggtaata 43902
>dbj|AK101050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010C12, full insert sequence Length = 4093 Score = 129 bits (65), Expect = 9e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 288 tcttcttccgagtgctctagtgatagtgaaggtgacaatgatgatgacattcagccaagt 347 |||| ||| |||||||| || ||||||||| ||| |||||||| | | ||||| || | Sbjct: 1443 tcttattctgagtgctccagcgatagtgaacatgataatgatgaagcaactcagcaaaat 1502 Query: 348 gatcttggcgttgacttgagagaagaagtggaattttgcaatggaagaatgaggcgaaaa 407 || | || |||| |||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 1503 gaccatgaagttggcttgagagaagaggtggaattttgcaatggaaggatgaggagaaaa 1562 Query: 408 gctgtgtcagctaattttcaagatgatgacgatgatg 444 ||||| |||||||||||| |||||||||||||||||| Sbjct: 1563 gctgtatcagctaattttaaagatgatgacgatgatg 1599 Score = 117 bits (59), Expect = 3e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 22 atgcatctaagaaacaagggaaaggtaatgatgttggtgtggctctagtaaaaactcttc 81 |||||||||| || ||||||||||| | ||||||||||| | ||||||||||| |||| Sbjct: 1198 atgcatctaaaaagcaagggaaaggacaggatgttggtgtaaccctagtaaaaacacttc 1257 Query: 82 agaacaccaagtactcccttgatgagaagctagatcagagttttataaatttcttcggca 141 ||||| ||| || |||||| |||| ||| | |||||||||||||||||||| || || | Sbjct: 1258 agaaccccagatattcccttaatgaaaagttggatcagagttttataaatttatttggta 1317 Query: 142 gacggcctgctgctcagtccgaagaca 168 || ||||||||||||||||||||||| Sbjct: 1318 gaaagcctgctgctcagtccgaagaca 1344 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 201 cagaatgaccaaggagatgctaacattttggcacaagtaggtggtaata 249 |||||||| || ||||||||||| ||||||| | ||| || |||||||| Sbjct: 1356 cagaatgatcagggagatgctaatattttggaagaagcagatggtaata 1404
>dbj|AK060242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F10, full insert sequence Length = 1397 Score = 129 bits (65), Expect = 9e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 288 tcttcttccgagtgctctagtgatagtgaaggtgacaatgatgatgacattcagccaagt 347 |||| ||| |||||||| || ||||||||| ||| |||||||| | | ||||| || | Sbjct: 515 tcttattctgagtgctccagcgatagtgaacatgataatgatgaagcaactcagcaaaat 574 Query: 348 gatcttggcgttgacttgagagaagaagtggaattttgcaatggaagaatgaggcgaaaa 407 || | || |||| |||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 575 gaccatgaagttggcttgagagaagaggtggaattttgcaatggaaggatgaggagaaaa 634 Query: 408 gctgtgtcagctaattttcaagatgatgacgatgatg 444 ||||| |||||||||||| |||||||||||||||||| Sbjct: 635 gctgtatcagctaattttaaagatgatgacgatgatg 671 Score = 117 bits (59), Expect = 3e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 22 atgcatctaagaaacaagggaaaggtaatgatgttggtgtggctctagtaaaaactcttc 81 |||||||||| || ||||||||||| | ||||||||||| | ||||||||||| |||| Sbjct: 270 atgcatctaaaaagcaagggaaaggacaggatgttggtgtaaccctagtaaaaacacttc 329 Query: 82 agaacaccaagtactcccttgatgagaagctagatcagagttttataaatttcttcggca 141 ||||| ||| || |||||| |||| ||| | |||||||||||||||||||| || || | Sbjct: 330 agaaccccagatattcccttaatgaaaagttggatcagagttttataaatttatttggta 389 Query: 142 gacggcctgctgctcagtccgaagaca 168 || ||||||||||||||||||||||| Sbjct: 390 gaaagcctgctgctcagtccgaagaca 416 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 201 cagaatgaccaaggagatgctaacattttggcacaagtaggtggtaata 249 |||||||| || ||||||||||| ||||||| | ||| || |||||||| Sbjct: 428 cagaatgatcagggagatgctaatattttggaagaagcagatggtaata 476
>dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-486A21, complete sequences Length = 57000 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 305 tagtgatagtgaaggtgacaatgatgatga 334 |||||||||||| ||||||||||||||||| Sbjct: 7841 tagtgatagtgatggtgacaatgatgatga 7870 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tcaaacactgatgacaacaat 23 ||||||||||||||||||||| Sbjct: 11534 tcaaacactgatgacaacaat 11554
>emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in linkage group 18, complete sequence Length = 148650 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 ||||||||||||||||||||||||| Sbjct: 9493 aagatgatgacgatgatgctgatga 9469
>gb|AC107032.4| Homo sapiens 12 BAC RP11-613M5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162515 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 tcaagatgatgacgatgatgctgatga 451 |||||||||||||||||||| |||||| Sbjct: 72035 tcaagatgatgacgatgatgatgatga 72061
>gb|AC040936.9| Homo sapiens chromosome 11, clone CTD-2140G10, complete sequence Length = 143063 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatga 451 ||||||||||||||||||||||| Sbjct: 137308 gatgatgacgatgatgctgatga 137286
>gb|AC055878.5| Homo sapiens chromosome 11, clone RP11-34N19, complete sequence Length = 183763 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatga 451 ||||||||||||||||||||||| Sbjct: 35238 gatgatgacgatgatgctgatga 35216
>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone BACR05M17, complete sequence Length = 182039 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatg 450 ||||||||||||||||||||||| Sbjct: 47921 agatgatgacgatgatgctgatg 47899
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete sequence Length = 291923 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatg 450 ||||||||||||||||||||||| Sbjct: 4387 agatgatgacgatgatgctgatg 4409
>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones DS08976 and DS01149, complete sequence Length = 129605 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatg 450 ||||||||||||||||||||||| Sbjct: 45243 agatgatgacgatgatgctgatg 45265
>ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 transcript variant AT1G13220.2 mRNA, complete cds Length = 3600 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 425 tcaagatgatgacgatgatgctgatg 450 |||||||||||||||||||| ||||| Sbjct: 3288 tcaagatgatgacgatgatgatgatg 3313
>gb|AC156802.7| Mus musculus BAC clone RP23-119P9 from chromosome 13, complete sequence Length = 209975 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 422 ttttcaagatgatgacgatgatgctgatga 451 ||||||||||||||| ||||||| |||||| Sbjct: 17576 ttttcaagatgatgatgatgatgatgatga 17547
>ref|XM_631334.1| Dictyostelium discoideum hypothetical protein (DDB0188213), partial mRNA Length = 4179 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatgag 452 |||||||||||||||||| ||||||| Sbjct: 3614 aagatgatgacgatgatgatgatgag 3639
>gb|AC139578.4| Mus musculus BAC clone RP23-188P12 from chromosome 18, complete sequence Length = 179415 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 gtgatagtgaaggtgacaatgatgatgaca 336 ||||| |||| ||||||||||||||||||| Sbjct: 41266 gtgatggtgatggtgacaatgatgatgaca 41295
>gb|AC148008.2| Mus musculus BAC clone RP23-253C14 from chromosome 18, complete sequence Length = 161965 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 gtgatagtgaaggtgacaatgatgatgaca 336 ||||| |||| ||||||||||||||||||| Sbjct: 99557 gtgatggtgatggtgacaatgatgatgaca 99586
>emb|AL355355.25| Human DNA sequence from clone RP11-730A19 on chromosome 10 Contains the 5' end of a novel gene (DKFZP761F241) (FLJ20925 FLJ38473), a ribosomal protein L5 (RPL5) pseudogene, the OPTN gene for optineurin, a small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene, a pseudogene similar to part of COX10 homolog, cytochrome c oxidase assembly protein heme A: farnesyltransferase (yeast) (COX10), a novel pseudogene (FLJ10648 KIAA1525), a ribosomal protein L36A (RPL36A) pseudogene, the 5' end of the MCM10 gene for MCM10 minichromosome maintenance deficient 10 (S. cerevisiae), a pseudogene similar to part of chromodomain protein Y chromosome 1 (CDY1) and two CpG islands, complete sequence Length = 196203 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 422 ttttcaagatgatgacgatgatgctgatga 451 ||||||||||||||| ||||||| |||||| Sbjct: 117764 ttttcaagatgatgatgatgatgatgatga 117793
>gb|AC160103.2| Mus musculus BAC clone RP24-422I4 from chromosome 13, complete sequence Length = 201998 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 422 ttttcaagatgatgacgatgatgctgatga 451 ||||||||||||||| ||||||| |||||| Sbjct: 71281 ttttcaagatgatgatgatgatgatgatga 71252
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 425 tcaagatgatgacgatgatgctgatg 450 |||||||||||||||||||| ||||| Sbjct: 92661 tcaagatgatgacgatgatgatgatg 92686
>gb|AC168059.3| Mus musculus BAC clone RP23-283G7 from chromosome 13, complete sequence Length = 200413 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 422 ttttcaagatgatgacgatgatgctgatga 451 ||||||||||||||| ||||||| |||||| Sbjct: 80150 ttttcaagatgatgatgatgatgatgatga 80179
>gb|AY999708.1| Crassostrea gigas clone uscCgi-210 microsatellite sequence Length = 624 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatgag 452 |||||||||||||||||| ||||||| Sbjct: 114 aagatgatgacgatgatgatgatgag 139
>ref|XM_642225.1| Dictyostelium discoideum hypothetical protein (DDB0216556), partial mRNA Length = 2277 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 938 aagatgatgacgatgatgatgatga 962
>ref|XM_638470.1| Dictyostelium discoideum hypothetical protein (DDB0167140), partial mRNA Length = 2661 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 731 aagatgatgacgatgatgatgatga 755
>ref|XM_634204.1| Dictyostelium discoideum hypothetical protein (DDB0185301), partial mRNA Length = 2748 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 730 aagatgatgacgatgatgatgatga 706
>ref|XM_631369.1| Dictyostelium discoideum hypothetical protein (DDB0219397), partial mRNA Length = 3108 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 2597 aagatgatgacgatgatgatgatga 2621
>gb|BC039748.1| Mus musculus RIKEN cDNA A330049M08 gene, mRNA (cDNA clone IMAGE:3595770) Length = 1693 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 847 aaggtgacaatgatgatgaca 827
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 175975 aagatgatgacgatgatgatgatga 175951 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 87645 aagatgatgacgatgatgatgatga 87621
>ref|NM_145555.1| Mus musculus RIKEN cDNA A330049M08 gene (A330049M08Rik), mRNA Length = 1682 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 836 aaggtgacaatgatgatgaca 816
>gb|BC005730.1| Mus musculus RIKEN cDNA A330049M08 gene, mRNA (cDNA clone MGC:11811 IMAGE:3595770), complete cds Length = 1682 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 836 aaggtgacaatgatgatgaca 816
>gb|BC044520.1| Danio rerio zgc:55870, mRNA (cDNA clone MGC:55870 IMAGE:3818495), complete cds Length = 2420 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatgag 452 ||||||||||||||||| ||||||| Sbjct: 756 agatgatgacgatgatgatgatgag 780
>ref|NM_001037310.1| Rattus norvegicus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9), transcript variant 3, mRNA Length = 1703 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 1417 aagatgatgacgatgatgatgatga 1441
>ref|NM_184048.2| Rattus norvegicus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9), transcript variant 2, mRNA Length = 1224 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 938 aagatgatgacgatgatgatgatga 962
>ref|NM_001033876.1| Mus musculus potassium channel, subfamily K, member 9 (Kcnk9), mRNA Length = 1209 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 920 aagatgatgacgatgatgatgatga 944
>gb|DQ185133.1| Mus musculus TASK-3 two-pore-domain K+ channel (Kcnk9) mRNA, complete cds Length = 1209 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 920 aagatgatgacgatgatgatgatga 944
>gb|AC116551.2| Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence Length = 153751 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 7165 aagatgatgacgatgatgatgatga 7141
>gb|BC037722.1| Mus musculus RIKEN cDNA A330049M08 gene, mRNA (cDNA clone IMAGE:4483294), with apparent retained intron Length = 1493 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 647 aaggtgacaatgatgatgaca 627
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 25428 aagatgatgacgatgatgttgatga 25452
>ref|XM_651097.1| Entamoeba histolytica HM-1:IMSS Brix domain protein (16.t00022) partial mRNA Length = 1062 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||| |||||||||||||| Sbjct: 989 aagatgatgaagatgatgctgatga 1013
>ref|XM_720127.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04851) partial mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 1013 aagatgatgacgatgatgatgatga 1037
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 gatgacgatgatgctgatgag 452 ||||||||||||||||||||| Sbjct: 72179 gatgacgatgatgctgatgag 72159
>gb|AY359819.1| Rattus norvegicus liver regeneration related protein mRNA, complete cds Length = 780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 734 aagatgatgacgatgatgatgatga 758
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 163508 aagatgatgacgatgatgatgatga 163484
>gb|AY325235.1| Rattus norvegicus Cb1-739 mRNA, complete cds Length = 826 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 774 aagatgatgacgatgatgatgatga 798
>gb|AC161195.4| Mus musculus chromosome 15, clone RP23-313M10, complete sequence Length = 166637 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 22243 aagatgatgacgatgatgatgatga 22267
>emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in linkage group 21, complete sequence Length = 129478 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatgag 452 ||||||||||||||||| ||||||| Sbjct: 80003 agatgatgacgatgatgatgatgag 80027
>emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on chromosome 11 Contains a ribosomal protein S16 (Rps16) pseudogene, the B3gnt1 gene for beta-1,3-N-acetylglucosaminyltransferase 1, the Murr1 gene for U2af1-rs1 region 1, the U2af1-rs1 gene for U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 (related sequence 1) and two CpG islands, complete sequence Length = 210863 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 308 tgatagtgaaggtgacaatgatgatgaca 336 ||||||||| |||||||||||||| |||| Sbjct: 31507 tgatagtgatggtgacaatgatgacgaca 31479
>emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 in linkage group 24, complete sequence Length = 158981 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 36571 aagatgatgacgatgatgatgatga 36595
>emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chromosome 11 Contains a novel gene (2810471M01Rik), the 5' end of the gene for a novel protein (E030025D05Rik) and a CpG island, complete sequence Length = 216627 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatga 451 ||||||||||| ||||||||||||| Sbjct: 121582 aagatgatgacaatgatgctgatga 121558
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 ttcaagatgatgacgatgatg 444 ||||||||||||||||||||| Sbjct: 2228180 ttcaagatgatgacgatgatg 2228200
>gb|AC022716.13| Homo sapiens chromosome 8, clone RP11-135I5, complete sequence Length = 163495 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 63882 aagatgatgacgatgatgatgatga 63906
>dbj|AK014757.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833423N13 product:hypothetical protein, full insert sequence Length = 1279 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 447 aaggtgacaatgatgatgaca 427
>ref|XM_693202.1| PREDICTED: Danio rerio similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) (LOC569795), mRNA Length = 6437 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 683 aagatgatgacgatgatgatgatga 707
>ref|XM_697130.1| PREDICTED: Danio rerio hypothetical protein LOC554936 (LOC554936), mRNA Length = 2402 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatgag 452 ||||||||||||||||| ||||||| Sbjct: 756 agatgatgacgatgatgatgatgag 780
>dbj|AK167453.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530014I18 product:hypothetical protein, full insert sequence Length = 1503 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 671 aaggtgacaatgatgatgaca 651
>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone BACR13H23, complete sequence Length = 179139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgat 449 ||||||||||||||||||||| Sbjct: 74849 gatgatgacgatgatgctgat 74869
>dbj|AK039485.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330049M08 product:hypothetical protein, full insert sequence Length = 1475 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 313 aaggtgacaatgatgatgaca 293
>dbj|AK076488.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833426H24 product:hypothetical protein, full insert sequence Length = 1586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 422 aaggtgacaatgatgatgaca 402
>ref|NM_063312.2| Caenorhabditis elegans RNA-dependent RNA polymerase Family family member (rrf-3) (rrf-3) mRNA, complete cds Length = 5384 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 1751 aagatgatgacgatgatgttgatga 1775
>ref|NM_200143.1| Danio rerio zgc:55870 (zgc:55870), mRNA Length = 2420 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatgag 452 ||||||||||||||||| ||||||| Sbjct: 756 agatgatgacgatgatgatgatgag 780
>gb|BC091109.1| Rattus norvegicus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone MGC:108535 IMAGE:7322630), complete cds Length = 1213 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 927 aagatgatgacgatgatgatgatga 951
>ref|XM_309074.2| Anopheles gambiae str. PEST ENSANGP00000019644 (ENSANGG00000017155), partial mRNA Length = 6441 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 4940 aagatgatgacgatgatgatgatga 4964
>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22, complete sequence Length = 166346 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 atttcttcaagacagaatgac 209 ||||||||||||||||||||| Sbjct: 32663 atttcttcaagacagaatgac 32683
>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18, complete sequence Length = 211922 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 147896 aagatgatgacgatgatgatgatga 147920
>emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 in linkage group 24, complete sequence Length = 147604 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 12968 aagatgatgacgatgatgatgatga 12992
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence Length = 204342 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 109546 aagatgatgacgatgatgatgatga 109570
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgat 449 ||||||||||||||||||||| Sbjct: 64684 gatgatgacgatgatgctgat 64704
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatga 451 |||||||||||||||||| |||||| Sbjct: 81142 aagatgatgacgatgatgatgatga 81166
>gb|AC004564.1|AC004564 Drosophila melanogaster DNA sequence (P1 DS08012 (D224)), complete sequence Length = 67833 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgat 449 ||||||||||||||||||||| Sbjct: 52664 gatgatgacgatgatgctgat 52644
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgat 449 ||||||||||||||||||||| Sbjct: 2142468 gatgatgacgatgatgctgat 2142488
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatg 444 ||||||||||||||||||||| Sbjct: 2088850 ttcaagatgatgacgatgatg 2088830
>emb|AL627185.10| Mouse DNA sequence from clone RP23-332E2 on chromosome 4, complete sequence Length = 120180 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 aaggtgacaatgatgatgaca 336 ||||||||||||||||||||| Sbjct: 33335 aaggtgacaatgatgatgaca 33355
>gb|AC153800.1| Mus musculus BAC RP23-128O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 atctaagaaacaagggaaag 45 |||||||||||||||||||| Sbjct: 119276 atctaagaaacaagggaaag 119257
>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete sequence; frRUNX3 (frRUNX3) gene, complete cds; and frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes, complete sequence Length = 271832 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||| |||||||||||||| Sbjct: 174557 agatgatgatgatgatgctgatga 174534
>ref|NM_115473.2| Arabidopsis thaliana EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3) AT3G56150 (EIF3C) mRNA, complete cds Length = 3033 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 659 gatgatgacgatgatgatgatgag 682
>ref|NM_114227.4| Arabidopsis thaliana nucleic acid binding AT3G43590 mRNA, complete cds Length = 2107 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 1681 gatgatgatgatgatgctgatgag 1658
>gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, complete sequence Length = 192877 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 90176 gatgatgacgatgatgatgatgag 90199
>ref|XM_633454.1| Dictyostelium discoideum kinesin 8 (DDB0191403), partial mRNA Length = 5622 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 2940 agatgatgacgatgatgatgatga 2917
>ref|XM_632401.1| Dictyostelium discoideum hypothetical protein (DDB0218875), partial mRNA Length = 1503 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 86 gatgatgacgatgatgttgatgag 63
>ref|XM_642348.1| Dictyostelium discoideum hypothetical protein (DDB0189669), partial mRNA Length = 1065 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 1029 agatgatgacgatgatgatgatga 1052
>ref|XM_636631.1| Dictyostelium discoideum hypothetical protein (DDB0205647), partial mRNA Length = 3162 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 2697 agatgatgacgatgatgatgatga 2720
>ref|XM_630438.1| Dictyostelium discoideum putative myb transcription factor (DDB0220516), partial mRNA Length = 3984 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 1065 agatgatgacgatgatgatgatga 1088
>ref|NM_184651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3039 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 gaaggtgacaatgatgatgacatt 338 |||| ||||||||||||||||||| Sbjct: 2871 gaagatgacaatgatgatgacatt 2894
>ref|XM_450275.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 1237 gatgatgatgatgatgctgatgag 1260
>gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O16, complete sequence Length = 161249 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 70542 gatgatgacgatgatgatgatgag 70519
>gb|AC120865.7| Mus musculus chromosome 5, clone RP23-88L6, complete sequence Length = 235287 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gaaggtgacaatgatgatga 334 |||||||||||||||||||| Sbjct: 166188 gaaggtgacaatgatgatga 166207
>gb|AY023439.1| Oryza sativa microsatellite MRG5764 containing (TCA)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 131 ttcaagatgatgatgatgatgatgatga 104
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 209262 gatgatgacgatgatgatgatgag 209239
>gb|BC076780.1| Xenopus laevis Eg6, mRNA (cDNA clone MGC:83684 IMAGE:6638009), complete cds Length = 2824 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 ttcaagatgatgacgatgat 443 |||||||||||||||||||| Sbjct: 1082 ttcaagatgatgacgatgat 1101
>gb|AC165971.3| Mus musculus BAC clone RP23-94L17 from chromosome 14, complete sequence Length = 211607 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 gaaacaagggaaaggtaatgatgt 55 |||||||||||| ||||||||||| Sbjct: 73456 gaaacaagggaagggtaatgatgt 73433
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aagatgatgacgatgatgctgatg 450 |||||||||||||||||| ||||| Sbjct: 98604 aagatgatgacgatgatgatgatg 98581
>gb|AC013351.7| Drosophila melanogaster clone BACR06H06, complete sequence Length = 186935 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 19804 agatgatgacgatgatgctg 19823
>ref|XM_322557.1| Neurospora crassa OR74A hypothetical protein (NCU00472.1) partial mRNA Length = 1473 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctga 448 |||||||||||||||||||| Sbjct: 715 gatgatgacgatgatgctga 734
>ref|XM_951698.1| Neurospora crassa OR74A hypothetical protein (NCU00472.1) partial mRNA Length = 1473 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctga 448 |||||||||||||||||||| Sbjct: 715 gatgatgacgatgatgctga 734
>ref|XM_957394.1| Neurospora crassa OR74A hypothetical protein (NCU07329.1) partial mRNA Length = 1068 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 1039 gatgatgacgatgatgatgatgag 1062
>ref|XM_327614.1| Neurospora crassa OR74A hypothetical protein (NCU07329.1) partial mRNA Length = 1068 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 1039 gatgatgacgatgatgatgatgag 1062
>gb|AC138716.2| Mus musculus BAC clone RP23-241B5 from chromosome 14, complete sequence Length = 167083 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 64963 gatgatgacgatgatgatgatgag 64940
>ref|XM_455675.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F13222g predicted mRNA Length = 2955 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 390 agatgatgacgatgatgatgatga 413
>gb|AC145881.4| Pan troglodytes BAC clone RP43-7E18 from chromosome 7, complete sequence Length = 199758 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgatagtgaaggtgacaatgatga 331 |||| ||||||||||||||||||| Sbjct: 54756 tgatggtgaaggtgacaatgatga 54779
>gb|DQ190471.1| Xenopus laevis Eg6 mRNA, complete cds Length = 2819 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 ttcaagatgatgacgatgat 443 |||||||||||||||||||| Sbjct: 1111 ttcaagatgatgacgatgat 1130
>gb|AY915648.1| Schistosoma japonicum SJCHGC08354 protein mRNA, partial cds Length = 259 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctga 448 |||||||||||||||||||| Sbjct: 109 gatgatgacgatgatgctga 128
>gb|DQ175838.1| Hordeum vulgare clone DsB41 Ds insertion site flanking region genomic sequence Length = 575 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tgatgacgatgatgctgatg 450 |||||||||||||||||||| Sbjct: 417 tgatgacgatgatgctgatg 398
>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence Length = 221807 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 agaagaagtggaattttgca 387 |||||||||||||||||||| Sbjct: 192821 agaagaagtggaattttgca 192840
>gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome 19, complete sequence Length = 202504 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 110197 gatgatgacgatgatgatgatgag 110174
>gb|AY484462.1| Dictyostelium discoideum kinesin family member 8 gene, complete cds Length = 6744 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 3773 agatgatgacgatgatgatgatga 3750
>ref|XM_818491.1| Trypanosoma brucei TREU927 clone RPCI93-12O16 hypothetical protein (Tb927.8.760) partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 646 gatgatgacgatgatgatgatgag 669
>ref|XM_757251.1| Ustilago maydis 521 hypothetical protein (UM06197.1) partial mRNA Length = 2301 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 1986 agatgatgacgatgatgctg 2005
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 327 gatgatgacgatgatgatgatgag 304
>ref|XM_445815.1| Candida glabrata CBS138, CAGL0E02893g partial mRNA Length = 2793 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 gatgacgatgatgctgatga 451 |||||||||||||||||||| Sbjct: 112 gatgacgatgatgctgatga 131
>ref|XM_644392.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (298.t00011) partial mRNA Length = 864 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 159 agatgatgacgatgatgatgatga 182
>ref|XM_721035.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05640) partial mRNA Length = 708 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 489 agatgatgacgatgatgatgatga 512
>gb|AC073269.7| Homo sapiens BAC clone RP11-436F9 from 7, complete sequence Length = 137889 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 attttcaagatgatgacgatgatg 444 ||||||| |||||||||||||||| Sbjct: 88001 attttcatgatgatgacgatgatg 88024
>gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome 9, complete sequence Length = 221907 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 161383 gatgatgacgatgatgatgatgag 161406
>gb|AC143356.1| Pan troglodytes BAC clone RP43-64A13 from 7, complete sequence Length = 154864 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 attttcaagatgatgacgatgatg 444 ||||||| |||||||||||||||| Sbjct: 149358 attttcatgatgatgacgatgatg 149335
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 38053 gatgatgacgatgatgatgatgag 38030
>gb|AC145023.4| Medicago truncatula clone mth2-30j24, complete sequence Length = 90381 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 63108 ttcaagatgatgaagatgatgatgatga 63135
>gb|AC148765.24| Medicago truncatula clone mth2-34f9, complete sequence Length = 85199 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 24263 ttcaagatgatgaagatgatgatgatga 24290
>emb|AJ225042.2|DMAJ5042 Drosophila melanogaster Trl gene Length = 13879 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 11711 agatgatgacgatgatgctg 11692
>emb|AL590438.12| Human DNA sequence from clone RP11-22L13 on chromosome 1 Contains part of the PRDM16 gene for PR domain containing 16, complete sequence Length = 99477 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 50197 gatgatgacgatgatgatgatgag 50220
>emb|AL389885.12| Human DNA sequence from clone RP11-391J2 on chromosome 10 Contains a histone deacetylase 1 (HD1, RPD3, RPD3L1) (HDAC1) pseudogene, part of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516) and a novel gene, complete sequence Length = 101767 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 caagatgatgacgatgatgctgat 449 ||||||||||||||||||| |||| Sbjct: 54098 caagatgatgacgatgatgatgat 54075
>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC Library) complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 caagatgatgacgatgatgc 445 |||||||||||||||||||| Sbjct: 44062 caagatgatgacgatgatgc 44043
>gb|AY064006.1| Arabidopsis thaliana putative eukaryotic translation initiation factor 3 subunit 8 (At3g56150) mRNA, complete cds Length = 3012 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 658 gatgatgacgatgatgatgatgag 681
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 gatgacgatgatgctgatga 451 |||||||||||||||||||| Sbjct: 273336 gatgacgatgatgctgatga 273355
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 1221068 agatgatgacgatgatgatgatga 1221091
>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence Length = 201842 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 127437 agatgatgacgatgatgatgatga 127414
>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20 Length = 122151 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aatgcatctaagaaacaagg 40 |||||||||||||||||||| Sbjct: 54480 aatgcatctaagaaacaagg 54461
>emb|AL391734.1|ATF22J12 Arabidopsis thaliana DNA chromosome 3, BAC clone F22J12 Length = 100231 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 70055 gatgatgatgatgatgctgatgag 70032
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 39138 gatgatgacgatgatgatgatgag 39115
>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12 Length = 129516 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 aatgaccaaggagatgctaa 223 |||||||||||||||||||| Sbjct: 118069 aatgaccaaggagatgctaa 118050
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13 Length = 94349 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 aatgaccaaggagatgctaa 223 |||||||||||||||||||| Sbjct: 4465 aatgaccaaggagatgctaa 4446
>gb|AF187000.4| Homo sapiens chromosome 8 clone RP1-316L14 map 8q24.2, complete sequence Length = 129679 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tgatgacgatgatgctgatg 450 |||||||||||||||||||| Sbjct: 37549 tgatgacgatgatgctgatg 37530
>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of a novel gene, a ribosomal protein L36 (Rpl36) pseudogene and a pseudogene similar to part of ribosomal protein S2 (Rps2), complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 aggcaccctggagagcaacc 282 |||||||||||||||||||| Sbjct: 124376 aggcaccctggagagcaacc 124357
>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete sequence Length = 400029 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 31400 gatgatgacgatgatgatgatgag 31423
>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179164 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 30766 agatgatgacgatgatgctg 30747
>gb|AC009729.14| Homo sapiens 12 BAC RP11-1K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167234 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 103534 gatgatgacgatgatggtgatgag 103557
>ref|NM_001038926.1| Drosophila melanogaster Trithorax-like CG33261-PI, isoform I (Trl) mRNA, complete cds Length = 3803 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 2489 agatgatgacgatgatgctg 2470
>ref|NM_206356.2| Drosophila melanogaster Trithorax-like CG33261-PB, isoform B (Trl) mRNA, complete cds Length = 4438 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 3124 agatgatgacgatgatgctg 3105
>gb|AY099824.1| Arabidopsis thaliana putative protein (At3g43590) mRNA, complete cds Length = 2105 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 1688 gatgatgatgatgatgctgatgag 1665
>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence Length = 112570 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 aagatgatgacgatgatgctgatg 450 |||||||||||||||||| ||||| Sbjct: 16648 aagatgatgacgatgatgatgatg 16671
>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete sequence Length = 158170 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 gaaggtgacaatgatgatgacatt 338 |||| ||||||||||||||||||| Sbjct: 149819 gaagatgacaatgatgatgacatt 149842
>gb|AF411956.1| Takifugu rubripes lck gene locus, partial sequence Length = 60169 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||| |||||||||||||| Sbjct: 30868 agatgatgatgatgatgctgatga 30845
>gb|AC100872.2| Homo sapiens chromosome 8, clone RP11-973F15, complete sequence Length = 195563 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tgatgacgatgatgctgatg 450 |||||||||||||||||||| Sbjct: 43721 tgatgacgatgatgctgatg 43702
>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence Length = 174487 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 422 ttttcaagatgatgacgatgatgctgat 449 ||||||||||||||| ||||||| |||| Sbjct: 70668 ttttcaagatgatgatgatgatgatgat 70641
>gb|AC158666.3| Mus musculus 6 BAC RP23-11A20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188927 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 181699 gatgatgacgatgatgatgatgag 181676
>gb|AC155329.7| Mus musculus 6 BAC RP24-183K24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146487 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 80423 gatgatgacgatgatgatgatgag 80446
>gb|AC114625.11| Mus musculus chromosome 3, clone RP24-107N14, complete sequence Length = 160025 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 agtaaaaactcttcagaacaccaa 91 |||||||||||| ||||||||||| Sbjct: 115814 agtaaaaactctccagaacaccaa 115791
>ref|XM_624267.1| PREDICTED: Apis mellifera similar to ENSANGP00000013716 (LOC551881), mRNA Length = 3882 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||| |||||||||||||| Sbjct: 3852 agatgatgatgatgatgctgatga 3875
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 3697461 gatgatgatgatgatgctgatgag 3697438
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 21939283 ttcaagatgatgatgatgatgatgatga 21939256
>gb|AC007465.4| Homo sapiens BAC clone RP11-575I21 from 2, complete sequence Length = 170305 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 ctagatcagagttttataaatttc 134 ||||||||||||| |||||||||| Sbjct: 140304 ctagatcagagttgtataaatttc 140327
>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence Length = 156728 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 gtgatagtgaaggtgacaatgatg 330 |||||||||| ||||||||||||| Sbjct: 83189 gtgatagtgatggtgacaatgatg 83212
>gb|AC137630.9| Homo sapiens 3 BAC RP13-131K19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 120173 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 agagaagaagtggaattttgcaat 389 |||| ||||||||||||||||||| Sbjct: 30347 agagcagaagtggaattttgcaat 30324
>gb|AC092376.3| Homo sapiens chromosome 16 clone RP11-679B19, complete sequence Length = 168083 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gtgatagtgaaggtgacaatgatgatga 334 ||||| |||| ||||||||||||||||| Sbjct: 154732 gtgatggtgatggtgacaatgatgatga 154705
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 214877 gatgatgacgatgatgatgatgag 214854
>gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, complete sequence Length = 62355 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 aatggaagaatgaggcgaaa 406 |||||||||||||||||||| Sbjct: 34111 aatggaagaatgaggcgaaa 34092
>gb|AC011996.8| Homo sapiens BAC clone RP11-250H22 from 2, complete sequence Length = 167826 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 46560 agatgatgacgatgatgatgatga 46537
>ref|XM_342400.2| PREDICTED: Rattus norvegicus similar to senataxin; DEAxQ-box helicase; tRNA splicing endonuclease regulator 1 (LOC362096), mRNA Length = 8445 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 3664 gatgatgaagatgatgctgatgag 3687
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 51572 ttcaagatgatgatgatgatgatgatga 51545
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 161768 ttcaagatgatgatgatgatgatgatga 161741
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 105722 gatgatgatgatgatgctgatgag 105699
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 4763 gatgatgatgatgatgctgatgag 4740
>gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete sequence Length = 157625 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 caagatgatgacgatgatgc 445 |||||||||||||||||||| Sbjct: 22135 caagatgatgacgatgatgc 22154
>dbj|AK068062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F10, full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 928 gatgatgatgatgatgctgatgag 951
>gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, complete sequence Length = 178733 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctga 448 |||||||||||||||||||| Sbjct: 21464 gatgatgacgatgatgctga 21445
>gb|BT002203.1| Arabidopsis thaliana putative protein (At3g43590) mRNA, complete cds Length = 1700 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 1549 gatgatgatgatgatgctgatgag 1526
>dbj|AK059394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-H12, full insert sequence Length = 1755 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 1237 gatgatgatgatgatgctgatgag 1260
>gb|AC006415.11|AC006415 Drosophila melanogaster, chromosome 2L, region 40B-40C, BAC clone BACR22A22, complete sequence Length = 162345 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 125244 agatgatgacgatgatgctg 125263
>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5, BAC clone BACR48G17, complete sequence Length = 179122 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 75697 agatgatgacgatgatgatgatga 75720
>gb|AF130355.1|AF130355 Neurospora crassa Pad-1 (pad-1) gene, complete cds Length = 3921 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aatgcatctaagaaacaagg 40 |||||||||||||||||||| Sbjct: 3421 aatgcatctaagaaacaagg 3402
>gb|AE003710.2| Drosophila melanogaster chromosome 3R, section 48 of 118 of the complete sequence Length = 224071 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctgatga 451 ||||||||||||||||| |||||| Sbjct: 64927 agatgatgacgatgatgatgatga 64950
>emb|AL109662.3|CNS018OU Human chromosome 14 DNA sequence BAC R-1053O12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168176 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 424 ttcaagatgatgacgatgatgctgatga 451 ||||||||||||| ||||||| |||||| Sbjct: 90709 ttcaagatgatgatgatgatgatgatga 90682
>gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81 of 83 of the complete sequence Length = 298116 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 164658 agatgatgacgatgatgctg 164677
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 116724 agatgatgacgatgatgctg 116743
>gb|AC148600.2| Xenopus tropicalis clone CH216-62H10, complete sequence Length = 162075 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 agaagtggaattttgcaatg 390 |||||||||||||||||||| Sbjct: 25115 agaagtggaattttgcaatg 25096
>gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174309 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 atctaagaaacaagggaaag 45 |||||||||||||||||||| Sbjct: 173686 atctaagaaacaagggaaag 173667
>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence Length = 170723 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 aggcaccctggagagcaacc 282 |||||||||||||||||||| Sbjct: 108716 aggcaccctggagagcaacc 108735
>gb|BT001961.1| Arabidopsis thaliana clone U10766 putative eukaryotic translation initiation factor 3 subunit 8 (At3g56150) mRNA, complete cds Length = 2734 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 535 gatgatgacgatgatgatgatgag 558
>gb|U53863.1|TBU53863 Trypanosoma brucei nucleolar RNA binding protein Nopp44/46 mRNA, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||||||||||| ||||||| Sbjct: 622 gatgatgacgatgatgatgatgag 645
>emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, complete sequence Length = 175575 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gatgatgacgatgatgctgatgag 452 |||||||| ||||||||||||||| Sbjct: 99630 gatgatgatgatgatgctgatgag 99607
>gb|CP000203.1| Drosophila melanogaster genomic scaffold 211000022280760 Length = 90124 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tgatgacgatgatgctgatg 450 |||||||||||||||||||| Sbjct: 57089 tgatgacgatgatgctgatg 57070
>gb|AC157953.2| Gallus gallus BAC clone CH261-93C23 from chromosome unknown, complete sequence Length = 231813 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 aagaatgaggcgaaaagctg 411 |||||||||||||||||||| Sbjct: 163382 aagaatgaggcgaaaagctg 163363
>gb|U68563.1|DMU68563 Drosophila melanogaster GAGA-519b Adf-2 isoform mRNA, complete cds Length = 4313 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agatgatgacgatgatgctg 447 |||||||||||||||||||| Sbjct: 3000 agatgatgacgatgatgctg 2981
>gb|DQ008058.1| Manduca sexta amyloid precursor protein-like protein mRNA, complete cds Length = 2612 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 gatgacgatgatgctgatga 451 |||||||||||||||||||| Sbjct: 725 gatgacgatgatgctgatga 744
>emb|AL606749.13| Mouse DNA sequence from clone RP23-325J22 on chromosome 3, complete sequence Length = 89111 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 aggcaccctggagagcaacc 282 |||||||||||||||||||| Sbjct: 82553 aggcaccctggagagcaacc 82534 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,061,371 Number of Sequences: 3902068 Number of extensions: 5061371 Number of successful extensions: 107542 Number of sequences better than 10.0: 186 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106714 Number of HSP's gapped (non-prelim): 828 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
