>SYGA_HELPY (P56453) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 303

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +1

Query: 229 FDFDHKRDAYGFAVRPQHLQRFREYAK----IYKEEEDERTHRWKDFL 360
           F+    R A   A R  ++ + R+ AK    +YKE+E+ER  R K+ L
Sbjct: 248 FNILDARKAISVAERQNYILQIRDLAKGCALLYKEQEEEREERLKNAL 295

>SYGA_HELPJ (Q9ZKP1) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 298

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +1

Query: 229 FDFDHKRDAYGFAVRPQHLQRFREYAK----IYKEEEDERTHRWKDFL 360
           F+    R A   A R  ++ + R+ AK    +YKE+E+ER  R K+ L
Sbjct: 248 FNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNAL 295

>SRS2_YEAST (P12954) ATP-dependent DNA helicase SRS2 (EC 3.6.1.-)|
          Length = 1174

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 74  TRILNDEDFVNEERRGIFVVQ 12
           TR+L+ ED ++EERR  FV Q
Sbjct: 702 TRVLSVEDSIDEERRMFFVAQ 722


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,672,672
Number of Sequences: 219361
Number of extensions: 443303
Number of successful extensions: 1082
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)