Clone Name | bastl41f03 |
---|---|
Clone Library Name | barley_pub |
>ANDR_CANFA (Q9TT90) Androgen receptor (Dihydrotestosterone receptor)| Length = 907 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 314 DDETQPGEGRAASRGRLVPACLPAHVAVSRT 222 D+E QP + R+AS+G AC+P S T Sbjct: 96 DEEQQPSQQRSASKGHPESACVPEPGVTSAT 126
>Y1899_MYCTU (O07733) UPF0189 protein Rv1899c/MT1950| Length = 359 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 5/78 (6%) Frame = -2 Query: 281 ASRGRLVPACLPAHVAVSRTTRRSSVXXXXXXXXXXXXXARASVGAGLA-----RAMPMR 117 A G A PA+ A+S +T R + AR + AG+A + Sbjct: 49 ALAGLTAGARCPAYAAISASTARPAATAGTTPATGASGSARPTDAAGMADLARPGVVATH 108 Query: 116 WARTAGGKGWDGDGICSC 63 RT G G G+C C Sbjct: 109 AVRTLGTTGSRAIGLCPC 126
>MAOC_ORYSA (P43279) NADP-dependent malic enzyme, chloroplast precursor (EC| 1.1.1.40) (NADP-ME) Length = 638 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -2 Query: 161 RASVGAGLARAMPMRWARTAGGKGWDGDGICSC 63 RA+ A A A P+ W R GG G G SC Sbjct: 5 RAAATAAAAAASPL-WKRGEGGSSGSGSGCTSC 36
>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1377 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 7/50 (14%) Frame = +2 Query: 5 SVEGTHEVNS---APHARLAAAGSCRSH----RHPIPFRPPCAPIASASH 133 SV ++E S +P + A++GSC SH + P P PP P S+S+ Sbjct: 243 SVGSSYENTSPAFSPLSSPASSGSCASHSPSGQEPGPSVPPLVPARSSSY 292
>IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Iroquois| homeobox protein 5) (Homeodomain protein IRXB2) Length = 484 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 79 SPSHPFPPAVRAHRIGIARASPAPTDAR 162 SP P P + +G +RASPAP AR Sbjct: 358 SPCPPCPGPMGGQTLGGSRASPAPAPAR 385
>IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Iroquois| homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A) Length = 482 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 79 SPSHPFPPAVRAHRIGIARASPAPTDAR 162 SP P P + +G +RASPAP +R Sbjct: 356 SPCPPCPGPIAGQALGGSRASPAPAPSR 383
>MAGI2_HUMAN (Q86UL8) Membrane-associated guanylate kinase, WW and PDZ| domain-containing protein 2 (Membrane-associated guanylate kinase inverted 2) (MAGI-2) (Atrophin-1-interacting protein 1) (Atrophin-1-interacting protein A) Length = 1455 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 79 SPSHPFPPAVRAHRIGIARASPAPT 153 SPSHP PP+ +H+I SP PT Sbjct: 1266 SPSHPAPPSDPSHQI-----SPGPT 1285
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 7/50 (14%) Frame = +2 Query: 5 SVEGTHEVNS---APHARLAAAGSCRSH----RHPIPFRPPCAPIASASH 133 SV ++E S +P + A++GSC SH + P P PP P S+S+ Sbjct: 243 SVGSSYENTSPAFSPLSSPASSGSCASHSPSGQEPGPSVPPLVPARSSSY 292 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,341,813 Number of Sequences: 219361 Number of extensions: 534344 Number of successful extensions: 1992 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1933 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1992 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)