ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 262 4e-67
2dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 262 4e-67
3ref|NM_191472.1| Oryza sativa (japonica cultivar-group), predic... 258 7e-66
4dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 46 0.048
5emb|X70703.1|PSMAP P.sativum mRNA for MAP kinase homologue 44 0.19
6emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 44 0.19
7gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.19
8ref|XM_512393.1| PREDICTED: Pan troglodytes similar to FLJ00153 ... 42 0.75
9gb|BC014252.2| Homo sapiens cDNA clone IMAGE:4635227, partial cds 42 0.75
10gb|AY143389.1| Eimeria tenella lactate dehydrogenase (LDH) mRNA,... 42 0.75
11gb|BC036041.1| Homo sapiens hypothetical protein MGC20983, mRNA ... 42 0.75
12gb|BC050355.1| Homo sapiens hypothetical protein MGC20983, mRNA ... 42 0.75
13gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, compl... 42 0.75
14dbj|AK056363.1| Homo sapiens cDNA FLJ31801 fis, clone NT2RI20090... 42 0.75
15gb|AC024575.6| Homo sapiens chromosome 19 clone CTD-2342J14, com... 42 0.75
16dbj|AB046020.1| Macaca fascicularis brain cDNA, clone:QccE-16176... 42 0.75
17ref|NM_145045.3| Homo sapiens hypothetical protein MGC20983 (MGC... 42 0.75
18dbj|AK110089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.75
19dbj|AP007285.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 0.75
20ref|XM_480606.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.0
21ref|XM_466619.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.0
22gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 3.0
23ref|XM_470783.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.0
24gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 3.0
25gb|BC033207.1| Homo sapiens hypothetical protein BC018697, mRNA ... 40 3.0
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.0
27emb|AJ245441.1|SPA245441 Saprolegnia parasitica mRNA for putativ... 40 3.0
28gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 40 3.0
29gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 3.0
30gb|AY282522.1| Myxococcus xanthus polyketide synthetase TA-1 gen... 40 3.0
31gb|AC008888.7| Homo sapiens chromosome 19 clone CTD-2221F12, com... 40 3.0
32gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 3.0
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
34dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
37ref|NM_145807.1| Homo sapiens hypothetical protein BC018697 (LOC... 40 3.0
38gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence 40 3.0
39dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
40dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
41dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
42dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
43gb|BC018697.2| Homo sapiens hypothetical protein BC018697, mRNA ... 40 3.0
44gb|BC018654.2| Homo sapiens hypothetical protein BC018697, mRNA ... 40 3.0 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  262 bits (132), Expect = 4e-67
 Identities = 189/208 (90%)
 Strand = Plus / Plus

                                                                            
Query: 24       cgatgcccgccgcggcagcctccggcggcggcgtggccgacgccgaggagcttttccgca 83
                ||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct: 32862549 cgatgcctgccgcggcagtctccggcggcggcgcggccgacgccgaggagctgttccgca 32862608

                                                                            
Query: 84       ccaagcgcgtcgcggagatccgcgaggtggaggccgccacccgccgcgagatctccgcca 143
                | |  ||| || |||||||||||| || ||||| |||||| |||||||||||||||||||
Sbjct: 32862609 cgagacgcatcccggagatccgcgcggcggagggcgccacgcgccgcgagatctccgcca 32862668

                                                                            
Query: 144      aggaggaggagctccggcagctcgtcggccgcagctaccgcgacctcctcgactccgtcg 203
                |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 32862669 aggaggaggagctccgccagctcgtcggccgcagctaccgcgacctcctcgactccgcgg 32862728

                                            
Query: 204      actccatcctgctcatcaagcagtcctc 231
                |||| || || |||||||||||||||||
Sbjct: 32862729 actcgatactcctcatcaagcagtcctc 32862756
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>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413G02
          Length = 155633

 Score =  262 bits (132), Expect = 4e-67
 Identities = 189/208 (90%)
 Strand = Plus / Plus

                                                                         
Query: 24    cgatgcccgccgcggcagcctccggcggcggcgtggccgacgccgaggagcttttccgca 83
             ||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct: 83954 cgatgcctgccgcggcagtctccggcggcggcgcggccgacgccgaggagctgttccgca 84013

                                                                         
Query: 84    ccaagcgcgtcgcggagatccgcgaggtggaggccgccacccgccgcgagatctccgcca 143
             | |  ||| || |||||||||||| || ||||| |||||| |||||||||||||||||||
Sbjct: 84014 cgagacgcatcccggagatccgcgcggcggagggcgccacgcgccgcgagatctccgcca 84073

                                                                         
Query: 144   aggaggaggagctccggcagctcgtcggccgcagctaccgcgacctcctcgactccgtcg 203
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 84074 aggaggaggagctccgccagctcgtcggccgcagctaccgcgacctcctcgactccgcgg 84133

                                         
Query: 204   actccatcctgctcatcaagcagtcctc 231
             |||| || || |||||||||||||||||
Sbjct: 84134 actcgatactcctcatcaagcagtcctc 84161
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>ref|NM_191472.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3087

 Score =  258 bits (130), Expect = 7e-66
 Identities = 187/206 (90%)
 Strand = Plus / Plus

                                                                       
Query: 26  atgcccgccgcggcagcctccggcggcggcgtggccgacgccgaggagcttttccgcacc 85
           ||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||| 
Sbjct: 1   atgcctgccgcggcagtctccggcggcggcgcggccgacgccgaggagctgttccgcacg 60

                                                                       
Query: 86  aagcgcgtcgcggagatccgcgaggtggaggccgccacccgccgcgagatctccgccaag 145
           |  ||| || |||||||||||| || ||||| |||||| |||||||||||||||||||||
Sbjct: 61  agacgcatcccggagatccgcgcggcggagggcgccacgcgccgcgagatctccgccaag 120

                                                                       
Query: 146 gaggaggagctccggcagctcgtcggccgcagctaccgcgacctcctcgactccgtcgac 205
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 121 gaggaggagctccgccagctcgtcggccgcagctaccgcgacctcctcgactccgcggac 180

                                     
Query: 206 tccatcctgctcatcaagcagtcctc 231
           || || || |||||||||||||||||
Sbjct: 181 tcgatactcctcatcaagcagtcctc 206
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 97      ggagatccgcgaggtggaggccgccac 123
               ||||||||||| |||||||||||||||
Sbjct: 1332828 ggagatccgcgcggtggaggccgccac 1332854



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      tcgcggagatccgcgaggtg 112
               ||||||||||||||||||||
Sbjct: 3358722 tcgcggagatccgcgaggtg 3358703
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>emb|X70703.1|PSMAP P.sativum mRNA for MAP kinase homologue
          Length = 1522

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 144 aggaggaggagctccggcagct 165
           ||||||||||||||||||||||
Sbjct: 33  aggaggaggagctccggcagct 54
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 181    ccgcgacctcctcgactccgtc 202
              ||||||||||||||||||||||
Sbjct: 168530 ccgcgacctcctcgactccgtc 168509
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 109     ggtggaggccgccacccgccgc 130
               ||||||||||||||||||||||
Sbjct: 2803376 ggtggaggccgccacccgccgc 2803397
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>ref|XM_512393.1| PREDICTED: Pan troglodytes similar to FLJ00153 protein (LOC455730),
           mRNA
          Length = 2676

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 140 gccaaggaggaggagctccggcagc 164
           ||||||||||||||||| |||||||
Sbjct: 511 gccaaggaggaggagctgcggcagc 535
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>gb|BC014252.2| Homo sapiens cDNA clone IMAGE:4635227, partial cds
          Length = 1736

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 140 gccaaggaggaggagctccggcagc 164
           ||||||||||||||||| |||||||
Sbjct: 721 gccaaggaggaggagctgcggcagc 745
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>gb|AY143389.1| Eimeria tenella lactate dehydrogenase (LDH) mRNA, complete cds
          Length = 1876

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  gcggagatccgcgaggtggag 115
           |||||||||||||||||||||
Sbjct: 823 gcggagatccgcgaggtggag 843
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>gb|BC036041.1| Homo sapiens hypothetical protein MGC20983, mRNA (cDNA clone
            IMAGE:5271547), with apparent retained intron
          Length = 2464

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 140  gccaaggaggaggagctccggcagc 164
            ||||||||||||||||| |||||||
Sbjct: 1451 gccaaggaggaggagctgcggcagc 1475
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>gb|BC050355.1| Homo sapiens hypothetical protein MGC20983, mRNA (cDNA clone
            IMAGE:4827996), partial cds
          Length = 2463

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 140  gccaaggaggaggagctccggcagc 164
            ||||||||||||||||| |||||||
Sbjct: 1451 gccaaggaggaggagctgcggcagc 1475
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>gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, complete sequence
          Length = 142645

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 140  gccaaggaggaggagctccggcagc 164
            ||||||||||||||||| |||||||
Sbjct: 7972 gccaaggaggaggagctgcggcagc 7948
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>dbj|AK056363.1| Homo sapiens cDNA FLJ31801 fis, clone NT2RI2009066, weakly similar to
            PLECTIN
          Length = 2082

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 140  gccaaggaggaggagctccggcagc 164
            ||||||||||||||||| |||||||
Sbjct: 1085 gccaaggaggaggagctgcggcagc 1109
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>gb|AC024575.6| Homo sapiens chromosome 19 clone CTD-2342J14, complete sequence
          Length = 119638

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 140   gccaaggaggaggagctccggcagc 164
             ||||||||||||||||| |||||||
Sbjct: 99246 gccaaggaggaggagctgcggcagc 99222
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>dbj|AB046020.1| Macaca fascicularis brain cDNA, clone:QccE-16176, similar to human
           hypothetical protein MGC20983, mRNA, NM_145045.1
          Length = 1543

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 140 gccaaggaggaggagctccggcagc 164
           ||||||||||||||||| |||||||
Sbjct: 531 gccaaggaggaggagctgcggcagc 555
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>ref|NM_145045.3| Homo sapiens hypothetical protein MGC20983 (MGC20983), mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 140  gccaaggaggaggagctccggcagc 164
            ||||||||||||||||| |||||||
Sbjct: 1123 gccaaggaggaggagctgcggcagc 1147
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>dbj|AK110089.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-G08, full
            insert sequence
          Length = 3663

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 127  ccgcgagatctccgccaaggaggaggagc 155
            |||||||||||||| ||||||| ||||||
Sbjct: 2060 ccgcgagatctccgacaaggagaaggagc 2088
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>dbj|AP007285.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01H08, TM0053,
             complete sequence
          Length = 109326

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   gccaaggaggaggagctccgg 160
             |||||||||||||||||||||
Sbjct: 27604 gccaaggaggaggagctccgg 27624
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>ref|XM_480606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 708

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 30  ccgccgcggcagcctccggcggcggcgt 57
           ||||||| |||||| |||||||||||||
Sbjct: 526 ccgccgccgcagccgccggcggcggcgt 553
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>ref|XM_466619.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 29  cccgccgcggcagcctccggcggcggcg 56
           |||||| |||||||| ||||||||||||
Sbjct: 128 cccgccacggcagccgccggcggcggcg 101
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>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    cggcggcgtggccgacgccg 68
             ||||||||||||||||||||
Sbjct: 51617 cggcggcgtggccgacgccg 51598
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>ref|XM_470783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 954

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  gcggcggcgtggccgacgccgagg 71
           |||||||||||||||||| |||||
Sbjct: 494 gcggcggcgtggccgacggcgagg 471
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     gcctccggcggcggcgtggc 60
              ||||||||||||||||||||
Sbjct: 263015 gcctccggcggcggcgtggc 263034
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>gb|BC033207.1| Homo sapiens hypothetical protein BC018697, mRNA (cDNA clone
            MGC:45863 IMAGE:4903484), complete cds
          Length = 1898

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   cgccgcggcagcctccggcg 50
            ||||||||||||||||||||
Sbjct: 1528 cgccgcggcagcctccggcg 1509
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 48       gcggcggcgtggccgacgccgagg 71
                |||||||||||||||||| |||||
Sbjct: 15351240 gcggcggcgtggccgacggcgagg 15351263
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>emb|AJ245441.1|SPA245441 Saprolegnia parasitica mRNA for putative RNA binding protein (puf1
            gene), strain Spt
          Length = 2467

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   cgtggccgacgccgaggagc 74
            ||||||||||||||||||||
Sbjct: 2225 cgtggccgacgccgaggagc 2244
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>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
              sequence
          Length = 164705

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 48     gcggcggcgtggccgacgccgagg 71
              |||||||||||||||||| |||||
Sbjct: 150286 gcggcggcgtggccgacggcgagg 150263
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     cgtggccgacgccgaggagc 74
              ||||||||||||||||||||
Sbjct: 149043 cgtggccgacgccgaggagc 149062
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>gb|AY282522.1| Myxococcus xanthus polyketide synthetase TA-1 gene, complete sequence
          Length = 26000

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   tcgactccatcctgctcatcaagc 224
             |||||||||||||| |||||||||
Sbjct: 11143 tcgactccatcctggtcatcaagc 11120
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>gb|AC008888.7| Homo sapiens chromosome 19 clone CTD-2221F12, complete sequence
          Length = 119631

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    cgccgcggcagcctccggcg 50
             ||||||||||||||||||||
Sbjct: 41109 cgccgcggcagcctccggcg 41128
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 104     cgcgaggtggaggccgccacccgccgcg 131
               |||||| |||| ||||||||||||||||
Sbjct: 3367507 cgcgagctggaagccgccacccgccgcg 3367480
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 33       ccgcggcagcctccggcggcggcg 56
                ||||||| ||||||||||||||||
Sbjct: 20754253 ccgcggcggcctccggcggcggcg 20754230
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 30      ccgccgcggcagcctccggcggcggcgt 57
               ||||||| |||||| |||||||||||||
Sbjct: 6155837 ccgccgccgcagccgccggcggcggcgt 6155810
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 48       gcggcggcgtggccgacgccgagg 71
                |||||||||||||||||| |||||
Sbjct: 15345774 gcggcggcgtggccgacggcgagg 15345797
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 29       cccgccgcggcagcctccggcggcggcg 56
                |||||| |||||||| ||||||||||||
Sbjct: 23734596 cccgccacggcagccgccggcggcggcg 23734623
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>ref|NM_145807.1| Homo sapiens hypothetical protein BC018697 (LOC126147), mRNA
          Length = 1898

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   cgccgcggcagcctccggcg 50
            ||||||||||||||||||||
Sbjct: 1528 cgccgcggcagcctccggcg 1509
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>gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence
          Length = 88203

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  gcagcctccggcggcggcgt 57
           ||||||||||||||||||||
Sbjct: 648 gcagcctccggcggcggcgt 667
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>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0569E11
          Length = 157319

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    ccgcggcagcctccggcggcggcg 56
             ||||||| ||||||||||||||||
Sbjct: 29282 ccgcggcggcctccggcggcggcg 29259
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 29    cccgccgcggcagcctccggcggcggcg 56
             |||||| |||||||| ||||||||||||
Sbjct: 45180 cccgccacggcagccgccggcggcggcg 45207
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 30    ccgccgcggcagcctccggcggcggcgt 57
             ||||||| |||||| |||||||||||||
Sbjct: 19230 ccgccgccgcagccgccggcggcggcgt 19203
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0486F07
          Length = 154926

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 30     ccgccgcggcagcctccggcggcggcgt 57
              ||||||| |||||| |||||||||||||
Sbjct: 111854 ccgccgccgcagccgccggcggcggcgt 111827
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>gb|BC018697.2| Homo sapiens hypothetical protein BC018697, mRNA (cDNA clone MGC:4067
            IMAGE:2961115), complete cds
          Length = 1863

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   cgccgcggcagcctccggcg 50
            ||||||||||||||||||||
Sbjct: 1528 cgccgcggcagcctccggcg 1509
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>gb|BC018654.2| Homo sapiens hypothetical protein BC018697, mRNA (cDNA clone MGC:2419
            IMAGE:2961115), complete cds
          Length = 1863

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   cgccgcggcagcctccggcg 50
            ||||||||||||||||||||
Sbjct: 1528 cgccgcggcagcctccggcg 1509


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,453,666
Number of Sequences: 3902068
Number of extensions: 2453666
Number of successful extensions: 54975
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54077
Number of HSP's gapped (non-prelim): 898
length of query: 232
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 210
effective length of database: 17,147,199,772
effective search space: 3600911952120
effective search space used: 3600911952120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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