ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 31 1.1
2RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 30 1.9
3ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adreno... 28 7.1
4ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 7.1

>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 317 ASGLDADGELLMAFRRAGTADPLGALGSWSYSDDSPC 427
           A  L++DG  L++  R  T+ P     SW+ SD +PC
Sbjct: 21  AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPC 57



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +2

Query: 266 MVKCVFLLVVLALRGRGASGLDADGELLMAFRRAGTADPLGALGSWSYSDD-SPC 427
           M+ C+ LL+ L+     +  L+ D  +L    + G +DP  +L SWS ++D +PC
Sbjct: 1   MLYCLILLLCLSSTYLPSLSLNQDATILRQ-AKLGLSDPAQSLSSWSDNNDVTPC 54



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>ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 515

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 358 AFMRILGCQCRGGRRRRRR 376



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>ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 514

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 357 AFMRILGCQCRGGRRRRRR 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,699,961
Number of Sequences: 219361
Number of extensions: 467689
Number of successful extensions: 1298
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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