>PG20_MYCTU (O53416) Hypothetical PE-PGRS family protein PE_PGRS20|
          Length = 463

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 18/57 (31%), Positives = 21/57 (36%)
 Frame = -1

Query: 235 KTVTGRTAWAGCAAGLTKRARKTSLGSRGRRRCLNLEGAWRRGGGRDGTAEAASPLG 65
           +T  G T   G +AGL         G  G        G W  G G +G A  A P G
Sbjct: 145 QTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGGNGGWLYGSGGNGGAGGAGPAG 201

>OR1M1_HUMAN (Q8NGA1) Olfactory receptor 1M1 (Olfactory receptor 19-6) (OR19-6)|
          Length = 313

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 354 ILTETVPQVVLS*QNGSRASDVPTEIIELYSTYF 253
           + T T+P++++S Q GS+A   P  +I++Y  +F
Sbjct: 73  LATNTIPKMLVSLQTGSKAISYPCCLIQMYFFHF 106

>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/59 (37%), Positives = 23/59 (38%)
 Frame = -1

Query: 220 RTAWAGCAAGLTKRARKTSLGSRGRRRCLNLEGAWRRGGGRDGTAEAASPLGWTRGETR 44
           R +W G   G    A     G RGR R        RRG G  GT E A      RGE R
Sbjct: 568 RGSWRGGRRGGGAGASGGGRGGRGRGR------GGRRGSGLSGTREDAGSPSARRGEQR 620

>PTSP_BOMMO (P82003) Prothoracicostatic peptide precursor (Bom-PTSP)|
          Length = 274

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 232 TVTGRTAWAGCAAGLTKRARKTSLGSRGRRRCLNLEGAWRRGGGRD 95
           T   + AW+   +G  KRA +    + G+R   +L  AW + G +D
Sbjct: 38  TEDDKRAWSSLHSGWAKRAWQDMSSAWGKRAWQDLNSAWGKRGWQD 83

>CEFE_NOCLA (Q03047) Deacetoxycephalosporin C synthetase (EC 1.14.20.1) (DAOCS)|
           (Expandase)
          Length = 314

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 236 QIQEDGK*VEYSSMISVGTSDALEPFCQLRTTW 334
           QI   GK  +YS   S+GT+D L P  +    W
Sbjct: 89  QITNTGKYTDYSMSYSMGTADNLFPSAEFEKAW 121

>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            [Contains: Transforming protein Int-3; Notch 4
            extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 208  AGCAAGLTKRARKTSLGSRGRRRCLNLEGAWRR 110
            +G   G T R R+ S GSRGRR     +  W R
Sbjct: 1880 SGSCGGPTTRGRRFSAGSRGRRGARASQDDWPR 1912

>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110|
           kDa subunit (eIF3 p110) (Translation initiation factor
           eIF3, p110 subunit) (eIF3a)
          Length = 932

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 124 GAWRRGGGRDGTAEAASPLGWTRGETRVSIP 32
           GAWRRGG   G     SP     G +R S+P
Sbjct: 879 GAWRRGGASAGGVSRDSPRYSRGGYSRGSVP 909

>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
 Frame = -1

Query: 181  RARKTSLGSRGR-------RRCLNLEGAWRRGGGRDGTAEAASPLGWTRGETR 44
            R  + + G RGR       R      G   RGGG  GT   ++P G T  ETR
Sbjct: 1034 RGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGSGGTNHPSAPRGRTASETR 1086

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
 Frame = -1

Query: 181  RARKTSLGSRGR-------RRCLNLEGAWRRGGGRDGTAEAASPLGWTRGETR 44
            R  + + G RGR       R      G   RGGG  GT   ++P G T  ETR
Sbjct: 1039 RGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGSGGTNHPSAPRGRTASETR 1091

>KR74_ICHV1 (Q00095) Gene 74 protein kinase (EC 2.7.11.1)|
          Length = 673

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 260 VEYSSMISVGTSDALEPFCQLRTTWGTVSVR 352
           VE+ S   V  S A++P  + RT+WG  +VR
Sbjct: 434 VEFRSRWGVRPSPAMDPRLEARTSWGKNAVR 464

>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)|
          Length = 451

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 205 GCAAGLTKRARKTSLGSRGRRRCLNLEGAWRRGGGRDGTAEAASPL 68
           G  AG+  +A K ++G  G      L+G+ + GG     AE  +P+
Sbjct: 224 GQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPI 269

>VIT_ONCMY (Q92093) Vitellogenin precursor (VTG) [Contains: Lipovitellin I|
           (LVI); Phosvitin (PV); Lipovitellin II (LVII)]
          Length = 1659

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 14/72 (19%)
 Frame = +3

Query: 141 RRRPREPSDVFLALFVNPAAHPAQAVLP-VTVFRSK-------------KMENKLNIVQ* 278
           +R PR   +V + LF++ A HP   +L  + +F +K             K E  + +   
Sbjct: 527 KREPRMVQEVAVQLFMDKALHPELRMLACIVLFETKPPMGLVITLASILKTEKNMQVAS- 585

Query: 279 FLLGHQMLLSRS 314
           F   H M L+RS
Sbjct: 586 FTYSHMMSLTRS 597


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,174,183
Number of Sequences: 219361
Number of extensions: 614641
Number of successful extensions: 1609
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)