ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41d03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 123 cgccctcgtcgcggcggccgtggccg 148 |||||||||||||||||||||||||| Sbjct: 23156 cgccctcgtcgcggcggccgtggccg 23131 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 ccgtgccgccggcgagcgccgcggaggc 173 ||||||||||| ||||||||||| |||| Sbjct: 154968 ccgtgccgccgccgagcgccgcgaaggc 154995
>gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 of the complete genome Length = 10189 Score = 46.1 bits (23), Expect = 0.041 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 ggccgtggccgtgccgccggcgagcgccgcg 168 |||| |||||| ||||||||||||||||||| Sbjct: 8570 ggccatggccgcgccgccggcgagcgccgcg 8540
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.041 Identities = 32/35 (91%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccggcgagcgccg 166 |||||||||||||||| |||||| ||| ||||||| Sbjct: 1961565 cgcggcggccgtggccctgccgctggccagcgccg 1961599
>ref|NM_188531.1| Oryza sativa (japonica cultivar-group), Ozsa8200 predicted mRNA Length = 1122 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 270 cgcggcggcggtggccgtgccgccgg 295
>ref|XM_472588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 712 ccctcgtcgcggcggccgtggc 691
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 21755213 ccctcgtcgcggcggccgtggc 21755192
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 6813360 cgcggcggcggtggccgtgccgccgg 6813385 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 19055464 tcctcgccctcgccgcggcggccgt 19055488 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgc 154 ||||||||||||||||| ||||| Sbjct: 29432985 cgcggcggccgtggccgcgccgc 29432963 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 25738629 ccctcgtcgcggcggccgcggcc 25738651
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 165512 cgcggcggcggtggccgtgccgccgg 165537
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 95421 cgcggcggcggtggccgtgccgccgg 95446
>dbj|AK121647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058N21, full insert sequence Length = 1800 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 1112 ccctcgtcgcggcggccgtggc 1091
>dbj|AK106517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B02, full insert sequence Length = 1817 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 642 cgcggcggcggtggccgtgccgccgg 667
>dbj|AK101054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015K21, full insert sequence Length = 1560 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccgg 157 ||||||||| |||||||||||||||| Sbjct: 408 cgcggcggcggtggccgtgccgccgg 433
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggc 146 |||||||||||||||||||||| Sbjct: 66830 ccctcgtcgcggcggccgtggc 66809
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcggccgtggccgtgccgccg 156 ||||||||||||||||||||| Sbjct: 569278 gcggccgtggccgtgccgccg 569298
>ref|NM_193176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 44 tcctcgccctcgccgcggcggccgt 68
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcggccgtggccgtgccgccg 156 ||||||||||||||||||||| Sbjct: 569094 gcggccgtggccgtgccgccg 569114
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tgccgccggcgagcgccgcgg 169 ||||||||||||||||||||| Sbjct: 479867 tgccgccggcgagcgccgcgg 479847
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tgccgccggcgagcgccgcgg 169 ||||||||||||||||||||| Sbjct: 1799257 tgccgccggcgagcgccgcgg 1799237
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tgccgccggcgagcgccgcgg 169 ||||||||||||||||||||| Sbjct: 984780 tgccgccggcgagcgccgcgg 984800
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ctcctgctcctcgccctcgtc 132 ||||||||||||||||||||| Sbjct: 26574931 ctcctgctcctcgccctcgtc 26574911 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gcggcggccgtggccgtgccgccg 156 |||||||||| ||||||||||||| Sbjct: 6965044 gcggcggccggggccgtgccgccg 6965021 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 103 gcgccgcgtctcctgctcctcgc 125 |||||||||| |||||||||||| Sbjct: 20713248 gcgccgcgtcacctgctcctcgc 20713226
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tcgccctcgtcgcggcggccgtggc 146 |||||||||||||||||||| |||| Sbjct: 565159 tcgccctcgtcgcggcggccctggc 565183
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 20881 tcctcgccctcgccgcggcggccgt 20905
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 cgccctcgtcgcggcggccgt 143 ||||||||||||||||||||| Sbjct: 3862737 cgccctcgtcgcggcggccgt 3862717 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgccgccggcgagcgccgcg 168 |||||||||||||||||||| Sbjct: 8742906 tgccgccggcgagcgccgcg 8742887 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 cctcgtcgcggcggccgtg 144 ||||||||||||||||||| Sbjct: 7397089 cctcgtcgcggcggccgtg 7397071
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ctcctgctcctcgccctcgtc 132 ||||||||||||||||||||| Sbjct: 108584 ctcctgctcctcgccctcgtc 108564
>dbj|AK109762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G11, full insert sequence Length = 1040 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ctcctgctcctcgccctcgtc 132 ||||||||||||||||||||| Sbjct: 39 ctcctgctcctcgccctcgtc 59
>dbj|AK101002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147G07, full insert sequence Length = 1933 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tcctcgccctcgtcgcggcggccgt 143 |||||||||||| |||||||||||| Sbjct: 120 tcctcgccctcgccgcggcggccgt 144
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gccgtgccgccggcgagcgccgcgg 169 ||||||||||| ||||||||||||| Sbjct: 3699970 gccgtgccgcccgcgagcgccgcgg 3699946 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcgtcgcggcggccgtggcc 147 |||||||||||||||||||| Sbjct: 3358835 tcgtcgcggcggccgtggcc 3358854
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cctcgccctcgtcgcggcgg 139 |||||||||||||||||||| Sbjct: 2226303 cctcgccctcgtcgcggcgg 2226322
>ref|XM_481192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 582 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 44 tcgcggcggccgtggccgtg 63
>ref|NM_185116.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 72 cgccggcgagcgccggcgaggcgagcat 45
>ref|XM_479336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 39 cgcggcggccgtggccgtggcggcggcg 66
>ref|NM_145952.2| Mus musculus TBC1D12: TBC1 domain family, member 12 (Tbc1d12), mRNA Length = 3961 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcgcggcggccgtggccg 148 |||||||||||||||||||| Sbjct: 69 cgtcgcggcggccgtggccg 88
>ref|NM_177454.2| Homo sapiens KIAA1946 (KIAA1946), mRNA Length = 3575 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 34481673 cgccggcgagcgccggcgaggcgagcat 34481646 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 11184077 ccctcgtcgcggcggccgcggcc 11184099
>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence Length = 167945 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcgcggcggccgtggccg 148 |||||||||||||||||||| Sbjct: 30055 cgtcgcggcggccgtggccg 30074
>ref|XM_001000978.1| PREDICTED: Mus musculus RIKEN cDNA D430039N05 gene (D430039N05Rik), mRNA Length = 5757 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 250 gcccgctcgctcgctccccc 231
>ref|XM_922613.2| PREDICTED: Mus musculus similar to KIAA1946, transcript variant 2 (LOC634842), mRNA Length = 5674 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 298 gcccgctcgctcgctccccc 279
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcgg 169 |||||||||||||||||||| Sbjct: 266584 gccgccggcgagcgccgcgg 266565
>gb|AY043330.1| Streptomyces lividans multidrug resistance efflux protein (ebrB) gene, complete cds Length = 2120 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 ccgtgccgccggcgagcgccgcggaggc 173 ||||||||||| ||||||||||| |||| Sbjct: 1581 ccgtgccgccgccgagcgccgcgaaggc 1554
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgc 151 |||||||||||||||||||| Sbjct: 724679 cgcggcggccgtggccgtgc 724660
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgccggcgagcgccgcg 168 ||||||||||||||| || |||| |||||||| Sbjct: 90969 cggccgtggccgtgctgcaggcgcgcgccgcg 91000
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgccggcgagcgccgcg 168 ||||||||||||||| || |||| |||||||| Sbjct: 204004 cggccgtggccgtgctgcaggcgcgcgccgcg 204035
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgccggcgagcgccgcg 168 ||||||||||||||| || |||| |||||||| Sbjct: 4535 cggccgtggccgtgctgcaggcgcgcgccgcg 4566
>gb|BC060872.1| Homo sapiens KIAA1946, mRNA (cDNA clone MGC:71825 IMAGE:30347998), complete cds Length = 3575 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcga 175 |||||||||||| ||||||||||| Sbjct: 1170862 cgccggcgagcggcgcggaggcga 1170839
>gb|AE005848.1| Caulobacter crescentus CB15 section 174 of 359 of the complete genome Length = 12510 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gccctcgtcgcggcggccgt 143 |||||||||||||||||||| Sbjct: 432 gccctcgtcgcggcggccgt 451
>dbj|AK091423.1| Homo sapiens cDNA FLJ34104 fis, clone FCBBF3007860 Length = 3283 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 44494 cgccggcgagcgccggcgaggcgagcat 44521
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cctgctcctcgccctcgtcg 133 |||||||||||||||||||| Sbjct: 1010309 cctgctcctcgccctcgtcg 1010290
>dbj|AK038899.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230073I09 product:NPD019 homolog [Homo sapiens], full insert sequence Length = 945 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 34 gcccgctcgctcgctccccc 15
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 10501904 tcgcggcggccgtggccgtg 10501923
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 26969900 cgcggcggccgtggccgtggcggcggcg 26969873
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 34571745 cgccggcgagcgccggcgaggcgagcat 34571718 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 11180840 ccctcgtcgcggcggccgcggcc 11180862
>gb|AC017101.10| Homo sapiens BAC clone RP11-556A11 from 2, complete sequence Length = 195635 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 113070 gcccgctcgctcgctccccc 113051
>dbj|AK172979.1| Mus musculus mRNA for mKIAA0608 protein Length = 3947 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcgcggcggccgtggccg 148 |||||||||||||||||||| Sbjct: 69 cgtcgcggcggccgtggccg 88
>ref|XM_575160.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA D430039N05 gene (LOC499821), mRNA Length = 2649 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 96 gcccgctcgctcgctccccc 77
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 34378 cgcggcggccgtggccgtggcggcggcg 34351
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gcggcggccgtggccgtgccgccg 156 ||||| |||||||||||||||||| Sbjct: 1803008 gcggccgccgtggccgtgccgccg 1802985 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 cgccctcgtcgcggcggcc 141 ||||||||||||||||||| Sbjct: 2862439 cgccctcgtcgcggcggcc 2862457
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gcggcggccgtggccgtgccgccg 156 |||||||||| ||||||||||||| Sbjct: 24471 gcggcggccggggccgtgccgccg 24448
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggcg 159 ||||||||||||||||||| || ||||| Sbjct: 118491 cgcggcggccgtggccgtggcggcggcg 118464
>gb|AE005029.1| Halobacterium sp. NRC-1 section 60 of 170 of the complete genome Length = 12664 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ccgtggccgtgccgccggcg 159 |||||||||||||||||||| Sbjct: 6265 ccgtggccgtgccgccggcg 6284
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0053M06 Length = 175416 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 124495 tcgcggcggccgtggccgtg 124514
>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_B05 Length = 121853 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 21372 tcgcggcggccgtggccgtg 21391
>dbj|AK109468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-C06, full insert sequence Length = 1654 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgcggcggccgtggccgtg 150 |||||||||||||||||||| Sbjct: 780 tcgcggcggccgtggccgtg 799
>dbj|AK099043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D01, full insert sequence Length = 741 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 82 cgccggcgagcgccggcgaggcgagcat 55
>dbj|AK062799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C11, full insert sequence Length = 728 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 87 cgccggcgagcgccggcgaggcgagcat 60
>dbj|AK059132.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-G10, full insert sequence Length = 684 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 cgccggcgagcgccgcggaggcgagcat 179 ||||||||||||||| ||||||||||| Sbjct: 87 cgccggcgagcgccggcgaggcgagcat 60
>gb|AF170560.1|AF170560 Streptomyces coelicolor A3(2) SdrA (sdrA), SdrB (sdrB), and SdrC (sdrC) genes, complete cds Length = 4014 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 ccgtgccgccggcgagcgccgcggaggc 173 ||||||||||| ||||||||||| |||| Sbjct: 65 ccgtgccgccgccgagcgccgcgaaggc 38
>emb|AL772301.7| Mouse DNA sequence from clone RP23-111F12 on chromosome 2, complete sequence Length = 187665 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcccgctcgctcgctccccc 97 |||||||||||||||||||| Sbjct: 165328 gcccgctcgctcgctccccc 165309
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgc 154 ||||||||||||| ||||||||| Sbjct: 2561843 cgcggcggccgtgtccgtgccgc 2561865
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 142 gtggccgtgccgccggcgagcgc 164 |||||||||| |||||||||||| Sbjct: 120841 gtggccgtgctgccggcgagcgc 120819
>ref|XM_466826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1910 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 cctcgtcgcggcggccgtg 144 ||||||||||||||||||| Sbjct: 199 cctcgtcgcggcggccgtg 217
>ref|XM_467429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3201 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gcggaggcgagcatcgacctggg 188 |||| |||||||||||||||||| Sbjct: 235 gcggtggcgagcatcgacctggg 257
>ref|XM_467481.1| Oryza sativa (japonica cultivar-group), mRNA Length = 994 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 150 gccgccggcgagcgccgcggagg 172 ||||||||| ||||||||||||| Sbjct: 111 gccgccggcaagcgccgcggagg 133
>ref|XM_464979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 120 cctcgccctcgtcgcggcggccgtggc 146 ||||| ||||||||| ||||||||||| Sbjct: 214 cctcgtcctcgtcgccgcggccgtggc 188
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 tgccgccggcgagcgccgc 167 ||||||||||||||||||| Sbjct: 477172 tgccgccggcgagcgccgc 477190
>ref|NM_191683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 672 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgc 154 ||||||||||||||||| ||||| Sbjct: 21 cgcggcggccgtggccgcgccgc 43
>ref|NM_192265.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 125 ccctcgtcgcggcggccgcggcc 147
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 ggcgagcatcgacctgggc 189 ||||||||||||||||||| Sbjct: 551155 ggcgagcatcgacctgggc 551173
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 cggccgtggccgtgccgcc 155 ||||||||||||||||||| Sbjct: 1161850 cggccgtggccgtgccgcc 1161832
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 122 tcgccctcgtcgcggcggccgtggccg 148 |||||||||||| |||||||| ||||| Sbjct: 3213025 tcgccctcgtcgtggcggccgcggccg 3213051 Score = 38.2 bits (19), Expect = 10.0 Identities = 29/31 (93%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 153 gccggcgagcgccgcggaggcgagcatcgac 183 |||| ||||||||||| |||||||||||||| Sbjct: 1413511 gccgccgagcgccgcg-aggcgagcatcgac 1413482 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 950831 gccgccggcgagcgccgcg 950813
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 cctgctcctcgccctcgtc 132 ||||||||||||||||||| Sbjct: 2372034 cctgctcctcgccctcgtc 2372016
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctc 129 ||||||||||||||||||| Sbjct: 1790466 tctcctgctcctcgccctc 1790484
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 38.2 bits (19), Expect = 10.0 Identities = 29/31 (93%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 153 gccggcgagcgccgcggaggcgagcatcgac 183 |||| ||||||||||| |||||||||||||| Sbjct: 2639628 gccgccgagcgccgcg-aggcgagcatcgac 2639599 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 1992641 gccgccggcgagcgccgcg 1992623 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 122 tcgccctcgtcgcggcggccgtggccg 148 |||||||||||| |||||||| ||||| Sbjct: 768107 tcgccctcgtcgtggcggccgcggccg 768081
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggaggc 173 ||||||||||||||||||| Sbjct: 133223 cggcgagcgccgcggaggc 133205
>ref|XM_747732.1| Aspergillus fumigatus Af293 alpha-mannosidase (Afu1g14560) partial mRNA Length = 1482 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 162 cgccgcggaggcgagcatcgacc 184 |||||||||| |||||||||||| Sbjct: 855 cgccgcggagtcgagcatcgacc 877
>gb|AY183467.1| Burkholderia pseudomallei RpoS gene, partial cds Length = 1105 Score = 38.2 bits (19), Expect = 10.0 Identities = 29/31 (93%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 153 gccggcgagcgccgcggaggcgagcatcgac 183 |||| ||||||||||| |||||||||||||| Sbjct: 677 gccgccgagcgccgcg-aggcgagcatcgac 706
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 123 cgccctcgtcgcggcggcc 141 ||||||||||||||||||| Sbjct: 698861 cgccctcgtcgcggcggcc 698843
>emb|AL353718.10| Human DNA sequence from clone RP11-472F14 on chromosome 9 Cotains the 3' end of the gene for ubiquitin-like, containing PHD and RING finger domains 2 (URF2), a novel gene (PROO365), the 3' end of the GLDC gene for glycine dehydrogenase (decarboxylating; glycine decarboxylase, glycine cleavage system protein P) and a pseudogene similar to part of RP42 homolog, complete sequence Length = 146746 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 gcatgccatcccactagcc 80 ||||||||||||||||||| Sbjct: 90336 gcatgccatcccactagcc 90354
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtg 150 ||||||||||||||||||| Sbjct: 2008200 cgcggcggccgtggccgtg 2008218
>gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full insert mRNA sequence Length = 1472 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 114 cctgctcctcgccctcgtcgcggcggc 140 |||||| |||| ||||||||||||||| Sbjct: 78 cctgcttctcgtcctcgtcgcggcggc 104
>emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production genes Length = 36270 Score = 38.2 bits (19), Expect = 10.0 Identities = 28/31 (90%) Strand = Plus / Minus Query: 120 cctcgccctcgtcgcggcggccgtggccgtg 150 ||||||| ||| | ||||||||||||||||| Sbjct: 13909 cctcgccgtcgacccggcggccgtggccgtg 13879
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 ccgtgccgccggcgagcgc 164 ||||||||||||||||||| Sbjct: 2724301 ccgtgccgccggcgagcgc 2724319
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 31424 gccgccggcgagcgccgcg 31406
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 cgtgccgccggcgagcgccgcgg 169 ||||||||||||| ||||||||| Sbjct: 139517 cgtgccgccggcgggcgccgcgg 139539
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 333636 gccgccggcgagcgccgcg 333618
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 cgtgccgccggcgagcgccgcgg 169 ||||||||||||| ||||||||| Sbjct: 55267 cgtgccgccggcgggcgccgcgg 55289
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 cgtgccgccggcgagcgccgcgg 169 ||||||||||||| ||||||||| Sbjct: 260143 cgtgccgccggcgggcgccgcgg 260121
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 115 ctgctcctcgccctcgtcg 133 ||||||||||||||||||| Sbjct: 154069 ctgctcctcgccctcgtcg 154087
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 ccgtgccgccggcgagcgc 164 ||||||||||||||||||| Sbjct: 91316 ccgtgccgccggcgagcgc 91334
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 2384180 gccgccggcgagcgccgcg 2384198 Score = 38.2 bits (19), Expect = 10.0 Identities = 29/31 (93%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 153 gccggcgagcgccgcggaggcgagcatcgac 183 |||| ||||||||||| |||||||||||||| Sbjct: 1743850 gccgccgagcgccgcg-aggcgagcatcgac 1743879 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 122 tcgccctcgtcgcggcggccgtggccg 148 |||||||||||| |||||||| ||||| Sbjct: 576753 tcgccctcgtcgtggcggccgcggccg 576727
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 gtggccgtgccgccggcga 160 ||||||||||||||||||| Sbjct: 277193 gtggccgtgccgccggcga 277175
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 129 cgtcgcggcggccgtggccgtgc 151 |||||||||||||||||| |||| Sbjct: 276002 cgtcgcggcggccgtggcggtgc 275980
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 97434 ccctcgtcgcggcggccgcggcc 97456
>gb|AE005941.1| Caulobacter crescentus CB15 section 267 of 359 of the complete genome Length = 11811 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 137 cggccgtggccgtgccgcc 155 ||||||||||||||||||| Sbjct: 8421 cggccgtggccgtgccgcc 8439
>gb|AE005849.1| Caulobacter crescentus CB15 section 175 of 359 of the complete genome Length = 14878 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 131 tcgcggcggccgtggccgtgccg 153 |||||||||||| |||||||||| Sbjct: 6643 tcgcggcggccgaggccgtgccg 6621
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 96652 ccctcgtcgcggcggccgcggcc 96630
>dbj|AK164501.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330014C23 product:Rho GTPase activating protein 6, full insert sequence Length = 2086 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctcgtcg 133 ||||||||||||||||| ||||| Sbjct: 1155 tctcctgctcctcgcccgcgtcg 1177
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 136 gcggccgtggccgtgccgccggc 158 ||||||||||||| ||||||||| Sbjct: 3882080 gcggccgtggccgggccgccggc 3882058
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggaggc 173 ||||||||||||||||||| Sbjct: 133502 cggcgagcgccgcggaggc 133484
>ref|NM_009707.2| Mus musculus Rho GTPase activating protein 6 (Arhgap6), transcript variant 1, mRNA Length = 5510 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctcgtcg 133 ||||||||||||||||| ||||| Sbjct: 1154 tctcctgctcctcgcccgcgtcg 1176
>dbj|AK171677.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830003J22 product:Rho GTPase activating protein 6, full insert sequence Length = 2086 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctcgtcg 133 ||||||||||||||||| ||||| Sbjct: 1155 tctcctgctcctcgcccgcgtcg 1177
>gb|AF234655.2| Streptomyces lincolnensis LmbIH (lmbIH) gene, complete cds Length = 1452 Score = 38.2 bits (19), Expect = 10.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 120 cctcgccctcgtcgcggcggccgtggccgtg 150 ||||||| ||| | ||||||||||||||||| Sbjct: 330 cctcgccgtcgacccggcggccgtggccgtg 360
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 cctcgtcgcggcggccgtg 144 ||||||||||||||||||| Sbjct: 1383980 cctcgtcgcggcggccgtg 1383962
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 142 gtggccgtgccgccggcgagcgc 164 |||||||||| |||||||||||| Sbjct: 19401615 gtggccgtgctgccggcgagcgc 19401593
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 150 gccgccggcgagcgccgcggagg 172 ||||||||| ||||||||||||| Sbjct: 29774613 gccgccggcaagcgccgcggagg 29774635 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gcggaggcgagcatcgacctggg 188 |||| |||||||||||||||||| Sbjct: 29470665 gcggtggcgagcatcgacctggg 29470687 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 cctcgtcgcggcggccgtg 144 ||||||||||||||||||| Sbjct: 24918213 cctcgtcgcggcggccgtg 24918231 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 120 cctcgccctcgtcgcggcggccgtggc 146 ||||| ||||||||| ||||||||||| Sbjct: 10747891 cctcgtcctcgtcgccgcggccgtggc 10747917
>gb|AC023162.41| Homo sapiens 3 BAC RP11-263I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95579 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 ctcccgtgctcccgccccg 19 ||||||||||||||||||| Sbjct: 33520 ctcccgtgctcccgccccg 33502
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 158 cgagcgccgcggaggcgag 176 ||||||||||||||||||| Sbjct: 4657983 cgagcgccgcggaggcgag 4657965 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 145 gccgtgccgccggcgagcg 163 ||||||||||||||||||| Sbjct: 4524176 gccgtgccgccggcgagcg 4524158 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 156 ggcgagcgccgcggaggcgagca 178 |||||||||||||| |||||||| Sbjct: 1751512 ggcgagcgccgcggcggcgagca 1751490 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 1190148 gccgccggcgagcgccgcg 1190130
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgc 154 ||||||||||||||||| ||||| Sbjct: 128047 cgcggcggccgtggccgcgccgc 128025
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gcggaggcgagcatcgacctggg 188 |||| |||||||||||||||||| Sbjct: 65695 gcggtggcgagcatcgacctggg 65717
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gcggaggcgagcatcgacctggg 188 |||| |||||||||||||||||| Sbjct: 121537 gcggtggcgagcatcgacctggg 121559
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 150 gccgccggcgagcgccgcggagg 172 ||||||||| ||||||||||||| Sbjct: 30958 gccgccggcaagcgccgcggagg 30980
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 150 gccgccggcgagcgccgcggagg 172 ||||||||| ||||||||||||| Sbjct: 143592 gccgccggcaagcgccgcggagg 143614
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 147 cgtgccgccggcgagcgcc 165 ||||||||||||||||||| Sbjct: 7218286 cgtgccgccggcgagcgcc 7218268
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 137 cggccgtggccgtgccgccggcg 159 ||||||||||||||| ||||||| Sbjct: 6451054 cggccgtggccgtgcggccggcg 6451032
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 41093 ccctcgtcgcggcggccgcggcc 41115
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 103 gcgccgcgtctcctgctcctcgc 125 |||||||||| |||||||||||| Sbjct: 135655 gcgccgcgtcacctgctcctcgc 135633
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 cctcgtcgcggcggccgtg 144 ||||||||||||||||||| Sbjct: 79496 cctcgtcgcggcggccgtg 79514
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 120 cctcgccctcgtcgcggcggccgtggc 146 ||||| ||||||||| ||||||||||| Sbjct: 87372 cctcgtcctcgtcgccgcggccgtggc 87398
>dbj|AK120845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M20, full insert sequence Length = 1908 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 cctcgtcgcggcggccgtg 144 ||||||||||||||||||| Sbjct: 200 cctcgtcgcggcggccgtg 218
>gb|AF012273.2|AF012273 Mus musculus rho-type GTPase-activating protein rhoGAPX-1 (Arhgap6) mRNA, complete cds Length = 4448 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctcgtcg 133 ||||||||||||||||| ||||| Sbjct: 279 tctcctgctcctcgcccgcgtcg 301
>gb|AF177664.1|AF177664 Mus musculus rho GTPase-activating protein 6 isoform 2 (Arhgap6) mRNA, complete cds Length = 4587 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctcgtcg 133 ||||||||||||||||| ||||| Sbjct: 279 tctcctgctcctcgcccgcgtcg 301
>ref|XM_312371.2| Anopheles gambiae str. PEST ENSANGP00000002978 (ENSANGG00000002442), partial mRNA Length = 2293 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtg 150 ||||||||||||||||||| Sbjct: 2107 cgcggcggccgtggccgtg 2125
>dbj|AK100997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N12, full insert sequence Length = 3201 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 166 gcggaggcgagcatcgacctggg 188 |||| |||||||||||||||||| Sbjct: 235 gcggtggcgagcatcgacctggg 257
>dbj|AK099170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088M05, full insert sequence Length = 926 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgc 154 ||||||||||||||||| ||||| Sbjct: 51 cgcggcggccgtggccgcgccgc 73
>dbj|AK069831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027B09, full insert sequence Length = 1661 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 156 ccctcgtcgcggcggccgcggcc 178
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 ctccagatccccgaaccct 52 ||||||||||||||||||| Sbjct: 327356 ctccagatccccgaaccct 327338
>dbj|AK067474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107G14, full insert sequence Length = 2090 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 125 ccctcgtcgcggcggccgtggcc 147 |||||||||||||||||| |||| Sbjct: 188 ccctcgtcgcggcggccgcggcc 210
>dbj|AK065836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037P14, full insert sequence Length = 995 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 150 gccgccggcgagcgccgcggagg 172 ||||||||| ||||||||||||| Sbjct: 111 gccgccggcaagcgccgcggagg 133
>gb|AY112506.1| Zea mays CL32664_-1 mRNA sequence Length = 496 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 catcgacctgggctccgag 195 ||||||||||||||||||| Sbjct: 373 catcgacctgggctccgag 355
>emb|BX469928.8| Zebrafish DNA sequence from clone DKEYP-47C5 in linkage group 22, complete sequence Length = 141594 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 gcatggcgccgcgtctcct 116 ||||||||||||||||||| Sbjct: 135639 gcatggcgccgcgtctcct 135657
>dbj|AK061091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H04, full insert sequence Length = 1120 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 cgcggcggccgtggccgtgccgc 154 ||||||||||||||||| ||||| Sbjct: 136 cgcggcggccgtggccgcgccgc 158
>emb|BX511183.6| Zebrafish DNA sequence from clone CH211-51F18 in linkage group 22, complete sequence Length = 179106 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 gcatggcgccgcgtctcct 116 ||||||||||||||||||| Sbjct: 168481 gcatggcgccgcgtctcct 168463
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 108 gcgtctcctgctcctcgccctcg 130 ||||||||||||||||| ||||| Sbjct: 2671461 gcgtctcctgctcctcgacctcg 2671483
>gb|AF097659.1|AF097659 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-m allele, nuclear gene encoding chloroplast protein, complete cds Length = 1043 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 456 gccgccggcgagcgccgcg 438
>gb|AF097656.1|AF097656 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-e allele, nuclear gene encoding chloroplast protein, complete cds Length = 1079 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccgccggcgagcgccgcg 168 ||||||||||||||||||| Sbjct: 486 gccgccggcgagcgccgcg 468
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 126 cctcgtcgcggcggccgtggccg 148 ||||| ||||||||||||||||| Sbjct: 935512 cctcgacgcggcggccgtggccg 935534
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 130 gtcgcggcggccgtggccg 148 ||||||||||||||||||| Sbjct: 1095454 gtcgcggcggccgtggccg 1095472
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 117 gctcctcgccctcgtcgcggcgg 139 ||||||||||||||||| ||||| Sbjct: 2800725 gctcctcgccctcgtcggggcgg 2800747
>emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from BAC 344J2 map 3q21 region D3S3607-D3S1587, complete sequence Length = 98356 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctcccgtgctcccgccccg 19 ||||||||||||||||||| Sbjct: 71327 ctcccgtgctcccgccccg 71345
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 132 cgcggcggccgtggccgtgccgccggc 158 |||||||||||| |||| ||||||||| Sbjct: 1017877 cgcggcggccgtcgccgggccgccggc 1017851
>gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L homolog genes, complete cds Length = 2211 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 cggcgagcgccgcggaggc 173 ||||||||||||||||||| Sbjct: 1786 cggcgagcgccgcggaggc 1768
>emb|AL663056.11| Mouse DNA sequence from clone RP23-24O15 on chromosome X, complete sequence Length = 197729 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 111 tctcctgctcctcgccctcgtcg 133 ||||||||||||||||| ||||| Sbjct: 65249 tctcctgctcctcgcccgcgtcg 65271
>gb|M77658.1|RCADNA Rhodobacter sphaeroides DNA fragment Length = 732 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 104 cgccgcgtctcctgctcctcgcc 126 |||||||||||| |||||||||| Sbjct: 364 cgccgcgtctccggctcctcgcc 342 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,059,072 Number of Sequences: 3902068 Number of extensions: 1059072 Number of successful extensions: 102301 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 90069 Number of HSP's gapped (non-prelim): 12232 length of query: 200 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 178 effective length of database: 17,147,199,772 effective search space: 3052201559416 effective search space used: 3052201559416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
