ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41c10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 811 bits (409), Expect = 0.0 Identities = 409/409 (100%) Strand = Plus / Plus Query: 41 tgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggccaag 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 tgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggccaag 62 Query: 101 aacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgcccgg 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 aacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgcccgg 122 Query: 161 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182 Query: 221 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 242 Query: 281 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 302 Query: 341 gagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctcacc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 gagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctcacc 362 Query: 401 ttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtca 449 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtca 411
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 577 bits (291), Expect = e-161 Identities = 297/299 (99%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacatccatcttcactgaaaaatgaaaaacagtgtgctggtg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3406 acacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctggtg 3465 Query: 61 ccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggagg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3466 ccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggagg 3525 Query: 121 gctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3526 gctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgct 3585 Query: 181 catgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3586 catgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcgg 3645 Query: 241 cgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgaccaag 299 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3646 cgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccatcgaccaag 3704 Score = 301 bits (152), Expect = 1e-78 Identities = 152/152 (100%) Strand = Plus / Plus Query: 298 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4253 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 4312 Query: 358 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactgggaggtgga 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4313 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactgggaggtgga 4372 Query: 418 gaagctcggggtgccgggcgccatcgtcgtca 449 |||||||||||||||||||||||||||||||| Sbjct: 4373 gaagctcggggtgccgggcgccatcgtcgtca 4404
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 343 bits (173), Expect = 3e-91 Identities = 278/313 (88%) Strand = Plus / Plus Query: 137 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 196 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 28 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 87 Query: 197 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 256 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 88 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 147 Query: 257 ggcgtcacctgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcggg 316 || |||||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 148 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 207 Query: 317 aaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 376 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 208 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 267 Query: 377 ggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggc 436 || ||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| Sbjct: 268 ggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggg 327 Query: 437 gccatcgtcgtca 449 ||| ||||||||| Sbjct: 328 gccgtcgtcgtca 340
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence Length = 515 Score = 343 bits (173), Expect = 3e-91 Identities = 278/313 (88%) Strand = Plus / Plus Query: 137 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 196 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 90 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 149 Query: 197 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 256 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 150 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 209 Query: 257 ggcgtcacctgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcggg 316 || |||||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 210 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 269 Query: 317 aaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 376 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 270 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 329 Query: 377 ggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggc 436 || ||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| Sbjct: 330 ggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggg 389 Query: 437 gccatcgtcgtca 449 ||| ||||||||| Sbjct: 390 gccgtcgtcgtca 402
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 335 bits (169), Expect = 7e-89 Identities = 264/295 (89%), Gaps = 3/295 (1%) Strand = Plus / Plus Query: 158 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 217 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 49 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 108 Query: 218 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 277 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 168 Query: 278 agctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggag 337 ||||||||||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 169 agctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagc 228 Query: 338 ctggagcagtgggtgacg---agcctgccgtcgctgacgacgggggagtccaagttcggc 394 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 229 ctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggc 288 Query: 395 ctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtca 449 | || ||||||||||| || || |||||||| |||||||| |||||| |||||| Sbjct: 289 gtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtca 343
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 236 bits (119), Expect = 5e-59 Identities = 134/139 (96%) Strand = Plus / Plus Query: 158 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 217 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 42884 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 42943 Query: 218 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 277 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 42944 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 43003 Query: 278 agctccaccgccgtcgacc 296 ||||||||||||||||||| Sbjct: 43004 agctccaccgccgtcgacc 43022 Score = 113 bits (57), Expect = 5e-22 Identities = 119/139 (85%), Gaps = 3/139 (2%) Strand = Plus / Plus Query: 314 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 370 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 43497 Query: 371 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 430 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 43498 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 43557 Query: 431 ccgggcgccatcgtcgtca 449 ||||| |||||| |||||| Sbjct: 43558 ccgggggccatcatcgtca 43576
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 5e-59 Identities = 134/139 (96%) Strand = Plus / Plus Query: 158 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 217 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27798754 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27798813 Query: 218 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 277 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27798814 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27798873 Query: 278 agctccaccgccgtcgacc 296 ||||||||||||||||||| Sbjct: 27798874 agctccaccgccgtcgacc 27798892 Score = 125 bits (63), Expect = 1e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 146 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 205 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 30023293 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30023352 Query: 206 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 265 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 30023353 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30023412 Query: 266 tgccagcttatcagctccaccgccgtcgacc 296 |||||||| |||||||| || |||||||| Sbjct: 30023413 tgccagctcgtcagctcctccctcgtcgacc 30023443 Score = 113 bits (57), Expect = 5e-22 Identities = 119/139 (85%), Gaps = 3/139 (2%) Strand = Plus / Plus Query: 314 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 370 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 27799367 Query: 371 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 430 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 27799368 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 27799427 Query: 431 ccgggcgccatcgtcgtca 449 ||||| |||||| |||||| Sbjct: 27799428 ccgggggccatcatcgtca 27799446 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 338 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctc 397 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 30023563 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 30023622 Query: 398 accttcgactgggaggtggagaag 421 || ||||| ||||||||||||||| Sbjct: 30023623 acgttcgagtgggaggtggagaag 30023646 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 22625516 acacactcacgcaacacaca 22625535 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 20262030 gagaggaggccaagaacaag 20262049
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 5e-59 Identities = 134/139 (96%) Strand = Plus / Plus Query: 158 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 217 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27890078 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27890137 Query: 218 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 277 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27890138 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27890197 Query: 278 agctccaccgccgtcgacc 296 ||||||||||||||||||| Sbjct: 27890198 agctccaccgccgtcgacc 27890216 Score = 125 bits (63), Expect = 1e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 146 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 205 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 30114715 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30114774 Query: 206 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 265 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 30114775 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30114834 Query: 266 tgccagcttatcagctccaccgccgtcgacc 296 |||||||| |||||||| || |||||||| Sbjct: 30114835 tgccagctcgtcagctcctccctcgtcgacc 30114865 Score = 113 bits (57), Expect = 5e-22 Identities = 119/139 (85%), Gaps = 3/139 (2%) Strand = Plus / Plus Query: 314 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 370 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 27890691 Query: 371 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 430 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 27890692 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 27890751 Query: 431 ccgggcgccatcgtcgtca 449 ||||| |||||| |||||| Sbjct: 27890752 ccgggggccatcatcgtca 27890770 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 338 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctc 397 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 30114985 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 30115044 Query: 398 accttcgactgggaggtggagaag 421 || ||||| ||||||||||||||| Sbjct: 30115045 acgttcgagtgggaggtggagaag 30115068 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 22618545 acacactcacgcaacacaca 22618564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 20255059 gagaggaggccaagaacaag 20255078
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 236 bits (119), Expect = 5e-59 Identities = 134/139 (96%) Strand = Plus / Minus Query: 158 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 217 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 15139 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 15080 Query: 218 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 277 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 15079 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 15020 Query: 278 agctccaccgccgtcgacc 296 ||||||||||||||||||| Sbjct: 15019 agctccaccgccgtcgacc 15001 Score = 113 bits (57), Expect = 5e-22 Identities = 119/139 (85%), Gaps = 3/139 (2%) Strand = Plus / Minus Query: 314 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 370 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 14526 Query: 371 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 430 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 14525 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 14466 Query: 431 ccgggcgccatcgtcgtca 449 ||||| |||||| |||||| Sbjct: 14465 ccgggggccatcatcgtca 14447
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 212 bits (107), Expect = 7e-52 Identities = 146/159 (91%) Strand = Plus / Plus Query: 137 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 196 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 176 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 235 Query: 197 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 256 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 236 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 295 Query: 257 ggcgtcacctgccagcttatcagctccaccgccgtcgac 295 || |||||||||||||| |||||||||||| ||||||| Sbjct: 296 ggggtcacctgccagctcatcagctccaccctcgtcgac 334 Score = 159 bits (80), Expect = 9e-36 Identities = 113/124 (91%) Strand = Plus / Plus Query: 326 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 385 ||||||||| | |||||||||||| ||||||||||||||||||||||||| || |||||| Sbjct: 945 gcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgaccggcgagtcc 1004 Query: 386 aagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtc 445 ||||||||| |||| ||||||||||||||||||||||| || |||||||| ||| ||||| Sbjct: 1005 aagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtc 1064 Query: 446 gtca 449 |||| Sbjct: 1065 gtca 1068
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 190 bits (96), Expect = 3e-45 Identities = 231/276 (83%) Strand = Plus / Plus Query: 146 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 205 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 34 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 93 Query: 206 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 265 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 94 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 153 Query: 266 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 325 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 154 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 213 Query: 326 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 385 |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 214 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 273 Query: 386 aagttcggcctcaccttcgactgggaggtggagaag 421 |||||||| | || ||||| ||||||||||||||| Sbjct: 274 aagttcggggtgacgttcgagtgggaggtggagaag 309
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 190 bits (96), Expect = 3e-45 Identities = 231/276 (83%) Strand = Plus / Plus Query: 146 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 205 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 149 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 208 Query: 206 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 265 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 209 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 268 Query: 266 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 325 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 269 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 328 Query: 326 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 385 |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 329 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 388 Query: 386 aagttcggcctcaccttcgactgggaggtggagaag 421 |||||||| | || ||||| ||||||||||||||| Sbjct: 389 aagttcggggtgacgttcgagtgggaggtggagaag 424
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 174 bits (88), Expect = 2e-40 Identities = 229/276 (82%) Strand = Plus / Plus Query: 146 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 205 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 131 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 190 Query: 206 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 265 |||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||| Sbjct: 191 aacgacttcggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacc 250 Query: 266 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 325 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 251 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 310 Query: 326 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 385 |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 311 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 370 Query: 386 aagttcggcctcaccttcgactgggaggtggagaag 421 |||||||| | || ||||| ||||||||||||||| Sbjct: 371 aagttcggggtgacgttcgagtgggaggtggagaag 406
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 161 bits (81), Expect = 2e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 161 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 220 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 121 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 180 Query: 221 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 280 | |||| |||||| || |||| |||||||| ||||||||||||||||| |||||| Sbjct: 181 cacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 240 Query: 281 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 340 |||||| ||||||||| ||||||| || |||||||||||||||||||||||| | ||| Sbjct: 241 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 300 Query: 341 gagcagtgg 349 ||||||||| Sbjct: 301 gagcagtgg 309 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 385 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 444 |||||||| | |||||||||||||| |||||| ||||| ||||||||||| |||||| | Sbjct: 351 caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggggccatcat 410 Query: 445 cgtca 449 ||||| Sbjct: 411 cgtca 415
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 228 tcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccg 287 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140 tcgacggcatcggcgagttcctcggccgcggcgtcacctgccagcttatcagctccaccg 199 Query: 288 ccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagt 347 |||||||| |||||||| ||||||||| |||||||||||||| |||||||||| Sbjct: 200 tcgtcgaccctaacaacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagt 259 Query: 348 gg 349 || Sbjct: 260 gg 261 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 387 agttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcg 446 ||||| || ||||||||||||||||||||||||||| || | |||||||||||| ||| Sbjct: 299 agttccgcgtcaccttcgactgggaggtggagaagcagggcatcccgggcgccatcatcg 358 Query: 447 tca 449 ||| Sbjct: 359 tca 361
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 125 bits (63), Expect = 1e-25 Identities = 129/151 (85%) Strand = Plus / Minus Query: 146 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 205 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 84458 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 84399 Query: 206 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 265 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 84398 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 84339 Query: 266 tgccagcttatcagctccaccgccgtcgacc 296 |||||||| |||||||| || |||||||| Sbjct: 84338 tgccagctcgtcagctcctccctcgtcgacc 84308 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 338 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctc 397 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 84188 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 84129 Query: 398 accttcgactgggaggtggagaag 421 || ||||| ||||||||||||||| Sbjct: 84128 acgttcgagtgggaggtggagaag 84105
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region and partial cds Length = 3196 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 387 agttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcg 446 ||||| || ||||||||||||||||||||||||||| ||| || |||||||||||| ||| Sbjct: 2820 agttccgcgtcaccttcgactgggaggtggagaagcacggcgtcccgggcgccatcatcg 2879 Query: 447 t 447 | Sbjct: 2880 t 2880 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 225 tcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctcca 284 |||| |||||| ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446 Query: 285 ccgccgtcgacc 296 ||| |||||||| Sbjct: 2447 ccgtcgtcgacc 2458 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 161 ctcaagggcacggtggtgctcatgcgcaagaacgtgct 198 |||||||||| |||||||||||||||||| |||||| Sbjct: 2317 ctcaagggcaacctggtgctcatgcgcaagaccgtgct 2354
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds Length = 1160 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 185 cgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgag 244 |||||||||| || ||| |||||||||||||||||||| || ||| || || |||| Sbjct: 1 cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60 Query: 245 ttcctcggcaagggcgtcacctgccagcttatcagctcc 283 ||||||||| ||||||||||||||||| |||||||| Sbjct: 61 ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 357 gcctgccgtcgctgacgacgggggagtccaagttcgg 393 |||||||||||| ||||||||| |||||||||||||| Sbjct: 173 gcctgccgtcgcggacgacgggagagtccaagttcgg 209
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence Length = 202929 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 319 ggtgggcgcggaggcggagctggag 343 ||||||||||||||||||||||||| Sbjct: 65371 ggtgggcgcggaggcggagctggag 65347
>ref|XM_974706.1| PREDICTED: Mus musculus hypothetical protein LOC665118 (LOC665118), mRNA Length = 444 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 319 ggtgggcgcggaggcggagctggag 343 ||||||||||||||||||||||||| Sbjct: 230 ggtgggcgcggaggcggagctggag 206
>ref|XM_977694.1| PREDICTED: Mus musculus discs, large homolog 5 (Drosophila), transcript variant 2 (Dlg5), mRNA Length = 7853 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 319 ggtgggcgcggaggcggagctggag 343 ||||||||||||||||||||||||| Sbjct: 117 ggtgggcgcggaggcggagctggag 141
>gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosome 14, complete sequence Length = 203950 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 319 ggtgggcgcggaggcggagctggag 343 ||||||||||||||||||||||||| Sbjct: 47104 ggtgggcgcggaggcggagctggag 47128
>dbj|AK147699.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1109K17 product:discs, large homolog 5 (Drosophila), full insert sequence Length = 7852 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 319 ggtgggcgcggaggcggagctggag 343 ||||||||||||||||||||||||| Sbjct: 118 ggtgggcgcggaggcggagctggag 142
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA Length = 2462 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1892 acacacactcacgcaacacacat 1914
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 161084 acacacactcacgcaacacacat 161106
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 4076 acacacactcacgcaacacacat 4098
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830025B18 product:oligodendrocyte transcription factor 2, full insert sequence Length = 2362 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1870 acacacactcacgcaacacacat 1892
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone MGC:62240 IMAGE:5695592), complete cds Length = 2462 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1892 acacacactcacgcaacacacat 1914
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds Length = 2433 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1871 acacacactcacgcaacacacat 1893
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 tgggcgcggaggcggagctgga 342 |||||||||||||||||||||| Sbjct: 1904267 tgggcgcggaggcggagctgga 1904288
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 385 caagttcggcctcaccttcgac 406 |||||||||||||||||||||| Sbjct: 4616430 caagttcggcctcaccttcgac 4616409
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 ctcaagggcacggtggtgctca 182 |||||||||||||||||||||| Sbjct: 1464951 ctcaagggcacggtggtgctca 1464930
>gb|AC147058.3| Pan troglodytes BAC clone RP43-154B16 from 7, complete sequence Length = 161951 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 tccatcttcactgaaaaatgaaaaa 47 ||||||| ||||||||||||||||| Sbjct: 106003 tccatctccactgaaaaatgaaaaa 105979
>gb|AC145895.2| Pan troglodytes BAC clone RP43-8H7 from 7, complete sequence Length = 170186 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 tccatcttcactgaaaaatgaaaaa 47 ||||||| ||||||||||||||||| Sbjct: 3976 tccatctccactgaaaaatgaaaaa 4000
>emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on chromosome 10 Contains the gene for neuropeptide FF 1; RFamide-related peptide receptor (OT7T022), the 3' end of a novel gene (FLJ10751) and two CpG islands, complete sequence Length = 80236 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gaggagaggaggccaagaaca 104 ||||||||||||||||||||| Sbjct: 46254 gaggagaggaggccaagaaca 46274
>ref|XM_965327.1| PREDICTED: Tribolium castaneum similar to CG7627-PA (LOC658981), mRNA Length = 4060 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 215 ggcgccaccatcatcgacggcatcg 239 ||||||| ||||||||||||||||| Sbjct: 3298 ggcgccatcatcatcgacggcatcg 3322
>emb|Z22956.1|NMHSP63A N.meningitidis of Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 ccaccatcatcgacggcatcggcga 243 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|Z22955.1|NFHSP63A N.flavescens Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 ccaccatcatcgacggcatcggcga 243 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 catcttcactgaaaaatgaaa 45 ||||||||||||||||||||| Sbjct: 1578802 catcttcactgaaaaatgaaa 1578822
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 ccaccatcatcgacggcatcggcga 243 ||||||||||||||||| ||||||| Sbjct: 112319 ccaccatcatcgacggcttcggcga 112343
>dbj|D28817.1|ACNGROESL Actinobacillus actinomycetemcomitans groES and groEL genes, complete cds Length = 2389 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 ccaccatcatcgacggcatcggcga 243 |||||||||||||||| |||||||| Sbjct: 1517 ccaccatcatcgacggtatcggcga 1541
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cacacactcacgcaacacaca 22 ||||||||||||||||||||| Sbjct: 40763 cacacactcacgcaacacaca 40743
>gb|AC024571.5| Homo sapiens chromosome 5 clone CTD-2220M16, complete sequence Length = 109134 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tgaaaaatgaaaaacagtgtg 54 ||||||||||||||||||||| Sbjct: 65910 tgaaaaatgaaaaacagtgtg 65930
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacac 21 ||||||||||||||||||||| Sbjct: 67476 acacacactcacgcaacacac 67496
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cacacactcacgcaacacaca 22 ||||||||||||||||||||| Sbjct: 137837 cacacactcacgcaacacaca 137817
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 42630 acacactcacgcaacacaca 42611
>ref|XM_474956.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3213 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 1601 gagaggaggccaagaacaag 1620
>ref|XM_464767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 291 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gctccaccgccgtcgaccaa 298 |||||||||||||||||||| Sbjct: 53 gctccaccgccgtcgaccaa 72
>ref|XM_463123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 773 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OSJNBa0011L09.15), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 1352 gagaggaggccaagaacaag 1371
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcgacggcatcggcgagttc 247 |||||||||||||||||||| Sbjct: 82079 tcgacggcatcggcgagttc 82060
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tgccgtcgctgacgacgggg 379 |||||||||||||||||||| Sbjct: 36217 tgccgtcgctgacgacgggg 36236
>gb|BC018233.1| Mus musculus interferon activated gene 202B, mRNA (cDNA clone MGC:18552 IMAGE:3990226), complete cds Length = 1792 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 1548 ctgaaaaatgaaaaacagtg 1567
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 53789 gagaggaggccaagaacaag 53770
>gb|BC055888.1| Mus musculus interferon activated gene 202B, mRNA (cDNA clone MGC:68172 IMAGE:4945964), complete cds Length = 1808 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 1541 ctgaaaaatgaaaaacagtg 1560
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 catcatcgacggcatcggcg 242 |||||||||||||||||||| Sbjct: 2473899 catcatcgacggcatcggcg 2473918
>ref|XM_752573.1| Ustilago maydis 521 hypothetical protein (UM01519.1) partial mRNA Length = 5133 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 aggcggagctggagcagtgg 349 |||||||||||||||||||| Sbjct: 2840 aggcggagctggagcagtgg 2859
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA Length = 5223 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gaggaggccaagaacaagat 108 |||||||||||||||||||| Sbjct: 4795 gaggaggccaagaacaagat 4814
>gb|U80436.1| Caenorhabditis elegans cosmid F55C7, complete sequence Length = 35759 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tcttcactgaaaaatgaaaa 46 |||||||||||||||||||| Sbjct: 10905 tcttcactgaaaaatgaaaa 10924
>gb|AC006944.13| Mus musculus strain 129S6/SvEvTac clone rp22-225p5 map 1q21-23, complete sequence Length = 120888 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 10697 ctgaaaaatgaaaaacagtg 10716
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 catcatcgacggcatcggcg 242 |||||||||||||||||||| Sbjct: 653887 catcatcgacggcatcggcg 653906
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 126301 gagaggaggccaagaacaag 126282
>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of glycopeptide antibiotic A40926, strain ATCC 39727 Length = 89153 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 gaagctcggggtgccgggcg 437 |||||||||||||||||||| Sbjct: 56754 gaagctcggggtgccgggcg 56735
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 212 ttcggcgccaccatcatcgacggcatcggcga 243 |||| |||||||||||||| |||| ||||||| Sbjct: 1835833 ttcgccgccaccatcatcggcggcttcggcga 1835864
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 85112 gagaggaggccaagaacaag 85093
>gb|AC005992.15| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-68e20, complete sequence Length = 154284 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 79657 ctgaaaaatgaaaaacagtg 79676
>gb|AC008100.71| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-423c02, complete sequence Length = 220020 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 125572 ctgaaaaatgaaaaacagtg 125591 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 51615 ctgaaaaatgaaaaacagtg 51634
>gb|AC007049.8| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone mgs1-166n14, complete sequence Length = 85931 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 11305 ctgaaaaatgaaaaacagtg 11324
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202745 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gaggagaggaggccaagaac 103 |||||||||||||||||||| Sbjct: 139186 gaggagaggaggccaagaac 139205
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gccgggcgccatcgtcgtca 449 |||||||||||||||||||| Sbjct: 2111639 gccgggcgccatcgtcgtca 2111658
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ctcaagggcacggtggtgct 180 |||||||||||||||||||| Sbjct: 2352289 ctcaagggcacggtggtgct 2352308
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 57337 gagaggaggccaagaacaag 57356
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 8315788 gagaggaggccaagaacaag 8315769
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 11856616 gagaggaggccaagaacaag 11856597
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tgccgtcgctgacgacgggg 379 |||||||||||||||||||| Sbjct: 4064555 tgccgtcgctgacgacgggg 4064574
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 12678450 gagaggaggccaagaacaag 12678469
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 9257767 gagaggaggccaagaacaag 9257786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 12246668 gagaggaggccaagaacaag 12246687
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 23122014 gagaggaggccaagaacaag 23121995
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gctccaccgccgtcgaccaa 298 |||||||||||||||||||| Sbjct: 7256294 gctccaccgccgtcgaccaa 7256313
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 27388692 gagaggaggccaagaacaag 27388711
>gb|AF234983.1|AF234983 Phaseolus vulgaris lipoxygenase gene, complete cds Length = 4083 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 173 gtggtgctcatgcgcaagaacgtgctggacctcaac 208 |||||||| ||||||||||| ||| ||||| ||||| Sbjct: 73 gtggtgctgatgcgcaagaatgtgttggacttcaac 108
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence Length = 160810 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 25 catcttcactgaaaaatgaaaaacagtg 52 ||||||||||||||| || ||||||||| Sbjct: 99888 catcttcactgaaaactgtaaaacagtg 99915
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 71587 gagaggaggccaagaacaag 71606
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 169209 gagaggaggccaagaacaag 169228
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cccggctcaagggcacggtggtgc 179 |||||||||| ||||||||||||| Sbjct: 5837219 cccggctcaacggcacggtggtgc 5837242
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tgccgggcgccatcgtcgtc 448 |||||||||||||||||||| Sbjct: 4138868 tgccgggcgccatcgtcgtc 4138887
>gb|AF178117.1|AF178117 Rhodospirillum rubrum polyhydroxyalkanoate synthase (PHA C) gene, complete cds Length = 2990 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gccgggcgccatcgtcgtca 449 |||||||||||||||||||| Sbjct: 734 gccgggcgccatcgtcgtca 753
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1742_G01 Length = 154912 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 83058 gagaggaggccaagaacaag 83077
>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1010G04a Length = 61450 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 27331 gagaggaggccaagaacaag 27350
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gctccaccgccgtcgaccaa 298 |||||||||||||||||||| Sbjct: 156231 gctccaccgccgtcgaccaa 156250
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gctccaccgccgtcgaccaa 298 |||||||||||||||||||| Sbjct: 32102 gctccaccgccgtcgaccaa 32121
>dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E14, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>gb|AF140672.1|AF140672 Mus musculus interferon-inducible Ifi202b (Ifi202b) mRNA, complete cds Length = 1618 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 1422 ctgaaaaatgaaaaacagtg 1441
>gb|AF141670.1|MMIFI7 Mus musculus Ifi202c pseudogene, exon 8 Length = 304 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 11 ctgaaaaatgaaaaacagtg 30
>dbj|AK063747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G06, full insert sequence Length = 667 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tgccgtcgctgacgacgggg 379 |||||||||||||||||||| Sbjct: 168 tgccgtcgctgacgacgggg 187
>emb|AM236600.1| Fusarium oxysporum f. sp. lycopersici orx1 gene for putative oxidoreductase, exons 1-8 Length = 2254 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 cgccgtcgaccaagacaacggcgg 309 |||||||||||||| ||||||||| Sbjct: 875 cgccgtcgaccaagccaacggcgg 898
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 catcatcgacggcatcggcg 242 |||||||||||||||||||| Sbjct: 2354751 catcatcgacggcatcggcg 2354732
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 12685790 gagaggaggccaagaacaag 12685809
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tgccgtcgctgacgacgggg 379 |||||||||||||||||||| Sbjct: 4073249 tgccgtcgctgacgacgggg 4073268
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 11856287 gagaggaggccaagaacaag 11856268
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17, complete sequence Length = 99093 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gagaggaggccaagaacaag 106 |||||||||||||||||||| Sbjct: 28356 gagaggaggccaagaacaag 28337
>ref|NM_008327.1| Mus musculus interferon activated gene 202B (Ifi202b), mRNA Length = 1857 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 1621 ctgaaaaatgaaaaacagtg 1640
>ref|NM_011940.1| Mus musculus interferon activated gene 202B (Ifi202b), mRNA Length = 1618 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 1422 ctgaaaaatgaaaaacagtg 1441
>gb|U42336.1|TAU42336 Triticum aestivum ACC synthase (TA-ACS2) gene, complete cds Length = 5590 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 gcggaggcggagctggagcagtgg 349 ||||||||||||||||||| |||| Sbjct: 2640 gcggaggcggagctggagctgtgg 2663
>gb|M31418.1|MUSINA202 Mouse 202 interferon-activatable protein mRNA, complete cds Length = 1857 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctgaaaaatgaaaaacagtg 52 |||||||||||||||||||| Sbjct: 1621 ctgaaaaatgaaaaacagtg 1640 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,333,616 Number of Sequences: 3902068 Number of extensions: 4333616 Number of successful extensions: 101007 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98874 Number of HSP's gapped (non-prelim): 2124 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
