ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 5e-15
2gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 90 5e-15
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
4dbj|AK121880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
5dbj|AK068556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
6ref|NM_192692.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
7ref|XM_742674.1| Aspergillus fumigatus Af293 cytochrome P450 alk... 42 1.1
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
9dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
10ref|XM_321754.2| Anopheles gambiae str. PEST ENSANGP00000009724 ... 42 1.1
11ref|XM_449992.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
12ref|NM_197425.1| Oryza sativa (japonica cultivar-group) putative... 40 4.5
13ref|NM_003045.3| Homo sapiens solute carrier family 7 (cationic ... 40 4.5
14ref|XM_469214.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
15ref|NM_018243.2| Homo sapiens septin 11 (SEPT11), mRNA 40 4.5
16gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosom... 40 4.5
17ref|XM_613422.2| PREDICTED: Bos taurus similar to YLP motif cont... 40 4.5
18gb|BC008083.2| Homo sapiens septin 11, mRNA (cDNA clone IMAGE:29... 40 4.5
19gb|BC064934.1| Homo sapiens cDNA clone IMAGE:6150586, partial cds 40 4.5
20gb|DQ100321.1| Uta stansburiana pinopsin mRNA, complete cds 40 4.5
21ref|XM_824691.1| Trypanosoma brucei TREU927 variant surface glyc... 40 4.5
22ref|XM_446403.1| Candida glabrata CBS138, CAGL0G00968g partial mRNA 40 4.5
23ref|NM_001009818.1| Mus musculus septin 11 (Sept11), mRNA 40 4.5
24emb|CR717393.2|CNS0GGHJ Tetraodon nigroviridis full-length cDNA 40 4.5
25emb|CR682331.2|CNS0FPFR Tetraodon nigroviridis full-length cDNA 40 4.5
26emb|AL596114.10| Human DNA sequence from clone RP11-274A8 on chr... 40 4.5
27gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 4.5
28gb|BC062206.1| Mus musculus septin 11, mRNA (cDNA clone MGC:7030... 40 4.5
29gb|BC064466.1| Mus musculus septin 11, mRNA (cDNA clone MGC:6990... 40 4.5
30emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 4.5
31gb|BC063303.1| Homo sapiens solute carrier family 7 (cationic am... 40 4.5
32gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genom... 40 4.5
33emb|CR859656.1| Pongo pygmaeus mRNA; cDNA DKFZp459G109 (from clo... 40 4.5
34emb|CR612694.1| full-length cDNA clone CS0DD003YH11 of Neuroblas... 40 4.5
35gb|DQ010753.1| Unidentified bacterium clone 10g58 membrane bound... 40 4.5
36dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 4.5
37ref|NM_140328.4| Drosophila melanogaster CG10686-RA (tral), mRNA 40 4.5
38gb|AY069066.1| Drosophila melanogaster GH08269 full length cDNA 40 4.5
39dbj|AK171368.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 4.5
40dbj|AK166517.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 40 4.5
41gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 4.5
42gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 4.5
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
44dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
46gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Can... 40 4.5
47gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, comple... 40 4.5
48gb|AY011606.1| Megaptera novaeangliae cannabinoid receptor 1 (CN... 40 4.5
49gb|AF298109.1|AF298109 Unidentified clone B35 DNA sequence from ... 40 4.5
50dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.5
51gb|AE004537.1| Pseudomonas aeruginosa PAO1, section 98 of 529 of... 40 4.5
52gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 40 4.5
53ref|NM_001002949.1| Canis familiaris B-cell CLL/lymphoma 2 (BCL2... 40 4.5
54ref|XM_223227.3| PREDICTED: Rattus norvegicus septin 6 (predicte... 40 4.5
55gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 4.5
56dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
57dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
58dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 4.5
59dbj|AB154172.1| Canis familiaris bcl-2 mRNA for Bcl-2 protein, c... 40 4.5
60dbj|AK120903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
61dbj|AK120399.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
62dbj|AK109534.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
63dbj|AK106346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
64emb|AJ326028.1|HSA326028 Homo sapiens genomic sequence surroundi... 40 4.5
65dbj|AK061572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
66dbj|AK059869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
67gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 4.5
68emb|AL929266.9| Zebrafish DNA sequence from clone CH211-67E16 in... 40 4.5
69gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.5
70gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 4.5
71gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
72gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
73emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.5
74emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.5
75emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 40 4.5
76emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.5
77gb|AC134827.4| Mus musculus BAC clone RP24-470E5 from 5, complet... 40 4.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 48    gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
             ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 44805 gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 44864

                      
Query: 108   ggtggtggt 116
             |||||||||
Sbjct: 44865 ggtggtggt 44873



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 304   ctgcaggtccacgacgtggcctccgacgtccccgc 338
             ||||||||||||||||||||| ||||| |||||||
Sbjct: 45043 ctgcaggtccacgacgtggcccccgacctccccgc 45077



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 211      ggcggcagcgggggcggcgg 230
                ||||||||||||||||||||
Sbjct: 34637912 ggcggcagcgggggcggcgg 34637931



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 135      cgcctccctcgccgctgcgctcct 158
                ||||||||||||||| ||||||||
Sbjct: 26118598 cgcctccctcgccgccgcgctcct 26118575



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 232   tgcttcctcatcctctccgccccggacgcgctcaaggaccaaatccggcgccgcct 287
             |||||||| |||||||||||||| ||  || |||| |  ||||||||||| |||||
Sbjct: 44950 tgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcct 45005
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 48    gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
             ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 80413 gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 80354

                      
Query: 108   ggtggtggt 116
             |||||||||
Sbjct: 80353 ggtggtggt 80345



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 304   ctgcaggtccacgacgtggcctccgacgtccccgc 338
             ||||||||||||||||||||| ||||| |||||||
Sbjct: 80175 ctgcaggtccacgacgtggcccccgacctccccgc 80141



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 232   tgcttcctcatcctctccgccccggacgcgctcaaggaccaaatccggcgccgcct 287
             |||||||| |||||||||||||| ||  || |||| |  ||||||||||| |||||
Sbjct: 80268 tgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcct 80213
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 48    gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
             ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 44805 gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 44864

                      
Query: 108   ggtggtggt 116
             |||||||||
Sbjct: 44865 ggtggtggt 44873



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 304   ctgcaggtccacgacgtggcctccgacgtccccgc 338
             ||||||||||||||||||||| ||||| |||||||
Sbjct: 45043 ctgcaggtccacgacgtggcccccgacctccccgc 45077



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 211      ggcggcagcgggggcggcgg 230
                ||||||||||||||||||||
Sbjct: 34727984 ggcggcagcgggggcggcgg 34728003



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 135      cgcctccctcgccgctgcgctcct 158
                ||||||||||||||| ||||||||
Sbjct: 26209907 cgcctccctcgccgccgcgctcct 26209884



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 232   tgcttcctcatcctctccgccccggacgcgctcaaggaccaaatccggcgccgcct 287
             |||||||| |||||||||||||| ||  || |||| |  ||||||||||| |||||
Sbjct: 44950 tgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcct 45005
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>dbj|AK121880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104L13, full
           insert sequence
          Length = 3178

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 48  gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
           ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 47  gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 106

                    
Query: 108 ggtggtggt 116
           |||||||||
Sbjct: 107 ggtggtggt 115



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 304 ctgcaggtccacgacgtggcctccgacgtccccgc 338
           ||||||||||||||||||||| ||||| |||||||
Sbjct: 285 ctgcaggtccacgacgtggcccccgacctccccgc 319



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 232 tgcttcctcatcctctccgccccggacgcgctcaaggaccaaatccggcgccgcct 287
           |||||||| |||||||||||||| ||  || |||| |  ||||||||||| |||||
Sbjct: 192 tgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcct 247
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>dbj|AK068556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H20, full
           insert sequence
          Length = 3118

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 48  gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
           ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 54  gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 113

                    
Query: 108 ggtggtggt 116
           |||||||||
Sbjct: 114 ggtggtggt 122



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 304 ctgcaggtccacgacgtggcctccgacgtccccgc 338
           ||||||||||||||||||||| ||||| |||||||
Sbjct: 292 ctgcaggtccacgacgtggcccccgacctccccgc 326



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 232 tgcttcctcatcctctccgccccggacgcgctcaaggaccaaatccggcgccgcct 287
           |||||||| |||||||||||||| ||  || |||| |  ||||||||||| |||||
Sbjct: 199 tgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcct 254
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>ref|NM_192692.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 999

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 129 cccgctcgcctccctcgccgc 149
           |||||||||||||||||||||
Sbjct: 495 cccgctcgcctccctcgccgc 515
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>ref|XM_742674.1| Aspergillus fumigatus Af293 cytochrome P450 alkane hydroxylase
           (Afu6g03090) partial mRNA
          Length = 1515

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 298 cagctcctgcaggtccacgac 318
           |||||||||||||||||||||
Sbjct: 555 cagctcctgcaggtccacgac 535
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 129      cccgctcgcctccctcgccgc 149
                |||||||||||||||||||||
Sbjct: 23883804 cccgctcgcctccctcgccgc 23883784
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   cccgctcgcctccctcgccgc 149
             |||||||||||||||||||||
Sbjct: 30208 cccgctcgcctccctcgccgc 30188
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>ref|XM_321754.2| Anopheles gambiae str. PEST ENSANGP00000009724
           (ENSANGG00000007285), partial mRNA
          Length = 987

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 130 ccgctcgcctccctcgccgctgcgctcct 158
           |||||||||||||||||||| ||| ||||
Sbjct: 807 ccgctcgcctccctcgccgccgcgatcct 779
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>ref|XM_449992.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2645

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 cccgctcgcctccctcgccg 148
           ||||||||||||||||||||
Sbjct: 223 cccgctcgcctccctcgccg 242
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>ref|NM_197425.1| Oryza sativa (japonica cultivar-group) putative reverse
           transcriptase (OSJNBa0096G08.13), mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 133 ctcgcctccctcgccgctgcgctc 156
           ||||||||||| ||||||||||||
Sbjct: 326 ctcgcctcccttgccgctgcgctc 349
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>ref|NM_003045.3| Homo sapiens solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 1 (SLC7A1), mRNA
          Length = 7248

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 cggacgcgctcaaggaccaa 273
           ||||||||||||||||||||
Sbjct: 115 cggacgcgctcaaggaccaa 96
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>ref|XM_469214.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 cgcctccctcgccgctgcgctcct 158
           ||||||||||||||| ||||||||
Sbjct: 497 cgcctccctcgccgccgcgctcct 520
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>ref|NM_018243.2| Homo sapiens septin 11 (SEPT11), mRNA
          Length = 5582

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 125 gcctcccgctcgcctccctcgccgctgcgctc 156
           ||||||| | |||||||||||| |||||||||
Sbjct: 82  gcctccctcgcgcctccctcgcggctgcgctc 51
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>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0096G08 map E1363S, complete sequence
          Length = 140681

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   ctcgcctccctcgccgctgcgctc 156
             ||||||||||| ||||||||||||
Sbjct: 80633 ctcgcctcccttgccgctgcgctc 80610
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>ref|XM_613422.2| PREDICTED: Bos taurus similar to YLP motif containing protein 1
           (Nuclear protein ZAP3) (ZAP113) (LOC540849), mRNA
          Length = 6787

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 ggcggcagcgggggcggcgg 230
           ||||||||||||||||||||
Sbjct: 428 ggcggcagcgggggcggcgg 409
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>gb|BC008083.2| Homo sapiens septin 11, mRNA (cDNA clone IMAGE:2966709), partial
           cds
          Length = 1880

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 125 gcctcccgctcgcctccctcgccgctgcgctc 156
           ||||||| | |||||||||||| |||||||||
Sbjct: 96  gcctccctcgcgcctccctcgcggctgcgctc 65
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>gb|BC064934.1| Homo sapiens cDNA clone IMAGE:6150586, partial cds
          Length = 1871

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 125 gcctcccgctcgcctccctcgccgctgcgctc 156
           ||||||| | |||||||||||| |||||||||
Sbjct: 58  gcctccctcgcgcctccctcgcggctgcgctc 27
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>gb|DQ100321.1| Uta stansburiana pinopsin mRNA, complete cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 gggctggtggtggtctccgc 122
           ||||||||||||||||||||
Sbjct: 103 gggctggtggtggtctccgc 122
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>ref|XM_824691.1| Trypanosoma brucei TREU927 variant surface glycoprotein
           (Tb11.14.0015) partial mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  cgccgccgccgttgccgacg 48
           ||||||||||||||||||||
Sbjct: 753 cgccgccgccgttgccgacg 734
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>ref|XM_446403.1| Candida glabrata CBS138, CAGL0G00968g partial mRNA
          Length = 2340

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 gctcctgctccacctgcaccacca 176
           ||||| ||||||||||||||||||
Sbjct: 649 gctccagctccacctgcaccacca 672
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>ref|NM_001009818.1| Mus musculus septin 11 (Sept11), mRNA
          Length = 5123

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 119 ccgccggcctcccgctcgcctccctcgccgctgcgc 154
           |||| |||||||| | |||||||||||| |||||||
Sbjct: 56  ccgctggcctcccccgcgcctccctcgcggctgcgc 21
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>emb|CR717393.2|CNS0GGHJ Tetraodon nigroviridis full-length cDNA
          Length = 705

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 295 tcccagctcctgcaggtccacgac 318
           ||||||||||||||| ||||||||
Sbjct: 306 tcccagctcctgcagctccacgac 283
to top
>emb|CR682331.2|CNS0FPFR Tetraodon nigroviridis full-length cDNA
          Length = 805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 139 tccctcgccgctgcgctcctgctc 162
           ||||||||||| ||||||||||||
Sbjct: 254 tccctcgccgccgcgctcctgctc 277
to top
>emb|AL596114.10| Human DNA sequence from clone RP11-274A8 on chromosome 13 Containd the 3'
              end of a novel gene (KIAA0774), a novel gene, the SLC7A1
              gene for solute carrier family 7 (cationic amino acid
              transporter, y+ system), member 1, and a CpG island,
              complete sequence
          Length = 173191

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    cggacgcgctcaaggaccaa 273
              ||||||||||||||||||||
Sbjct: 165075 cggacgcgctcaaggaccaa 165094
to top
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   ggcggcagcgggggcggcgg 230
             ||||||||||||||||||||
Sbjct: 95629 ggcggcagcgggggcggcgg 95648
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>gb|BC062206.1| Mus musculus septin 11, mRNA (cDNA clone MGC:70304 IMAGE:5150858),
           complete cds
          Length = 1846

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 119 ccgccggcctcccgctcgcctccctcgccgctgcgc 154
           |||| |||||||| | |||||||||||| |||||||
Sbjct: 97  ccgctggcctcccccgcgcctccctcgcggctgcgc 62
to top
>gb|BC064466.1| Mus musculus septin 11, mRNA (cDNA clone MGC:69905 IMAGE:6825549),
           complete cds
          Length = 5123

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 119 ccgccggcctcccgctcgcctccctcgccgctgcgc 154
           |||| |||||||| | |||||||||||| |||||||
Sbjct: 56  ccgctggcctcccccgcgcctccctcgcggctgcgc 21
to top
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   gctcctgctccacctgcaccacca 176
             ||||| ||||||||||||||||||
Sbjct: 87482 gctccagctccacctgcaccacca 87459
to top
>gb|BC063303.1| Homo sapiens solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 1, mRNA (cDNA clone
           MGC:71710 IMAGE:30340706), complete cds
          Length = 4590

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 cggacgcgctcaaggaccaa 273
           ||||||||||||||||||||
Sbjct: 21  cggacgcgctcaaggaccaa 2
to top
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete
             sequence
          Length = 139187

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   cgcctccctcgccgctgcgctcct 158
             ||||||||||||||| ||||||||
Sbjct: 37952 cgcctccctcgccgccgcgctcct 37975
to top
>emb|CR859656.1| Pongo pygmaeus mRNA; cDNA DKFZp459G109 (from clone DKFZp459G109)
          Length = 2636

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 125 gcctcccgctcgcctccctcgccgctgcgctc 156
           ||||||| | |||||||||||| |||||||||
Sbjct: 73  gcctccctcgcgcctccctcgcggctgcgctc 42
to top
>emb|CR612694.1| full-length cDNA clone CS0DD003YH11 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1863

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 125 gcctcccgctcgcctccctcgccgctgcgctc 156
           ||||||| | |||||||||||| |||||||||
Sbjct: 121 gcctccctcgcgcctccctcgcggctgcgctc 90
to top
>gb|DQ010753.1| Unidentified bacterium clone 10g58 membrane bound nitrate reductase
           (narG) gene, partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   gcagacgaacggaaccagct 28
           ||||||||||||||||||||
Sbjct: 81  gcagacgaacggaaccagct 100
to top
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tcgccgccgccgttgccgacgatg 51
              |||| |||||||||||||||||||
Sbjct: 179707 tcgcggccgccgttgccgacgatg 179730
to top
>ref|NM_140328.4| Drosophila melanogaster CG10686-RA (tral), mRNA
          Length = 3347

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 153 gctcctgctccacctgcaccacca 176
           |||||||||||||| |||||||||
Sbjct: 856 gctcctgctccaccagcaccacca 833
to top
>gb|AY069066.1| Drosophila melanogaster GH08269 full length cDNA
          Length = 2896

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 153 gctcctgctccacctgcaccacca 176
           |||||||||||||| |||||||||
Sbjct: 806 gctcctgctccaccagcaccacca 783
to top
>dbj|AK171368.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730047D14
           product:Similar to SEPTIN6 type II homolog [Mus
           musculus], full insert sequence
          Length = 3482

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 119 ccgccggcctcccgctcgcctccctcgccgctgcgc 154
           |||| |||||||| | |||||||||||| |||||||
Sbjct: 77  ccgctggcctcccccgcgcctccctcgcggctgcgc 42
to top
>dbj|AK166517.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930049A09
           product:Similar to SEPTIN6 type II homolog [Mus
           musculus], full insert sequence
          Length = 3586

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 119 ccgccggcctcccgctcgcctccctcgccgctgcgc 154
           |||| |||||||| | |||||||||||| |||||||
Sbjct: 77  ccgctggcctcccccgcgcctccctcgcggctgcgc 42
to top
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   gctcctgctccacctgcaccacca 176
             |||||||||||||| |||||||||
Sbjct: 85636 gctcctgctccaccagcaccacca 85613
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 22      accagctcgccgccgccgttgccg 45
               ||||| ||||||||||||||||||
Sbjct: 3011291 accagatcgccgccgccgttgccg 3011314
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 306      gcaggtccacgacgtggcctccgacgtc 333
                |||||||| ||||||||||| |||||||
Sbjct: 22919774 gcaggtccgcgacgtggcctacgacgtc 22919747



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 28      tcgccgccgccgttgccgacgatg 51
               |||||||||||| |||||||||||
Sbjct: 2762249 tcgccgccgccgctgccgacgatg 2762226
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 133      ctcgcctccctcgccgctgcgctc 156
                ||||||||||| ||||||||||||
Sbjct: 19819595 ctcgcctcccttgccgctgcgctc 19819572
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    cccgctcgcctccctcgccg 148
              ||||||||||||||||||||
Sbjct: 853837 cccgctcgcctccctcgccg 853856
to top
>gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 198537

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   ctcccgctcgcctccctcgc 146
             ||||||||||||||||||||
Sbjct: 28972 ctcccgctcgcctccctcgc 28953
to top
>gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, complete sequence
          Length = 176662

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 125    gcctcccgctcgcctccctcgccgctgcgctc 156
              ||||||| | |||||||||||| |||||||||
Sbjct: 101581 gcctccctcgcgcctccctcgcggctgcgctc 101550
to top
>gb|AY011606.1| Megaptera novaeangliae cannabinoid receptor 1 (CNR1) gene, partial
           cds
          Length = 990

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  ggccgtggcggacctcctgg 88
           ||||||||||||||||||||
Sbjct: 321 ggccgtggcggacctcctgg 340
to top
>gb|AF298109.1|AF298109 Unidentified clone B35 DNA sequence from ocean beach sand
          Length = 530

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 ggcggcagcgggggcggcgg 230
           ||||||||||||||||||||
Sbjct: 163 ggcggcagcgggggcggcgg 144
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 26      gctcgccgccgccgttgccgacga 49
               ||||||||||||||| ||||||||
Sbjct: 8735177 gctcgccgccgccgtcgccgacga 8735200



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 105     gctggtggtggtctccgccg 124
               ||||||||||||||||||||
Sbjct: 6807830 gctggtggtggtctccgccg 6807849
to top
>gb|AE004537.1| Pseudomonas aeruginosa PAO1, section 98 of 529 of the complete genome
          Length = 13946

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ctggtggtggtctccgccgg 125
             ||||||||||||||||||||
Sbjct: 12154 ctggtggtggtctccgccgg 12173
to top
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence,
            complete sequence
          Length = 129302

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ggcggcagcgggggcggcgg 230
            ||||||||||||||||||||
Sbjct: 5421 ggcggcagcgggggcggcgg 5402
to top
>ref|NM_001002949.1| Canis familiaris B-cell CLL/lymphoma 2 (BCL2), mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 ggcggcagcgggggcggcgg 230
           ||||||||||||||||||||
Sbjct: 654 ggcggcagcgggggcggcgg 635
to top
>ref|XM_223227.3| PREDICTED: Rattus norvegicus septin 6 (predicted)
           (Sept6_predicted), mRNA
          Length = 2525

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 119 ccgccggcctcccgctcgcctccctcgccgctgcgc 154
           |||| |||||||| | |||||||||||| |||||||
Sbjct: 385 ccgctggcctcccccgcgcctccctcgcggctgcgc 350
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     gccgccgccgttgccgacgatgct 53
              |||| |||||||||||||||||||
Sbjct: 952784 gccgacgccgttgccgacgatgct 952807
to top
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0501E09
          Length = 150604

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    cccgctcgcctccctcgccg 148
              ||||||||||||||||||||
Sbjct: 139176 cccgctcgcctccctcgccg 139195
to top
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0646B04
          Length = 178896

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   cccgctcgcctccctcgccg 148
             ||||||||||||||||||||
Sbjct: 17964 cccgctcgcctccctcgccg 17983
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     ctccctcgccgctgcgctcc 157
               ||||||||||||||||||||
Sbjct: 2326866 ctccctcgccgctgcgctcc 2326885
to top
>dbj|AB154172.1| Canis familiaris bcl-2 mRNA for Bcl-2 protein, complete cds
          Length = 1374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 ggcggcagcgggggcggcgg 230
           ||||||||||||||||||||
Sbjct: 654 ggcggcagcgggggcggcgg 635
to top
>dbj|AK120903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030O12, full
           insert sequence
          Length = 1974

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 cgcctccctcgccgctgcgctcct 158
           ||||||||||||||| ||||||||
Sbjct: 487 cgcctccctcgccgccgcgctcct 510
to top
>dbj|AK120399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088D17, full
           insert sequence
          Length = 2036

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 cgcctccctcgccgctgcgctcct 158
           ||||||||||||||| ||||||||
Sbjct: 437 cgcctccctcgccgccgcgctcct 460
to top
>dbj|AK109534.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C08, full
           insert sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 28  tcgccgccgccgttgccgacgatg 51
           |||||||||||| |||||||||||
Sbjct: 877 tcgccgccgccgctgccgacgatg 854
to top
>dbj|AK106346.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H04, full
           insert sequence
          Length = 2645

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 cccgctcgcctccctcgccg 148
           ||||||||||||||||||||
Sbjct: 223 cccgctcgcctccctcgccg 242
to top
>emb|AJ326028.1|HSA326028 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-DD10C
          Length = 600

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ctcccgctcgcctccctcgc 146
           ||||||||||||||||||||
Sbjct: 81  ctcccgctcgcctccctcgc 62
to top
>dbj|AK061572.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F12, full
           insert sequence
          Length = 1217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 cgcctccctcgccgctgcgctcct 158
           ||||||||||||||| ||||||||
Sbjct: 434 cgcctccctcgccgccgcgctcct 457
to top
>dbj|AK059869.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E08, full
           insert sequence
          Length = 1194

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 211 ggcggcagcgggggcggcgg 230
           ||||||||||||||||||||
Sbjct: 157 ggcggcagcgggggcggcgg 176
to top
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 153    gctcctgctccacctgcaccacca 176
              |||||||||||||| |||||||||
Sbjct: 205788 gctcctgctccaccagcaccacca 205765
to top
>emb|AL929266.9| Zebrafish DNA sequence from clone CH211-67E16 in linkage group 9,
              complete sequence
          Length = 199104

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    ctcccgctcgcctccctcgc 146
              ||||||||||||||||||||
Sbjct: 142972 ctcccgctcgcctccctcgc 142953
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 29      cgccgccgccgttgccgacg 48
               ||||||||||||||||||||
Sbjct: 2346856 cgccgccgccgttgccgacg 2346875



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cgccgccgccgttgccgacg 48
             ||||||||||||||||||||
Sbjct: 41456 cgccgccgccgttgccgacg 41475
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ctcgccgccgccgttgccga 46
              ||||||||||||||||||||
Sbjct: 322228 ctcgccgccgccgttgccga 322247
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 133      ctcgcctccctcgccgctgcgctc 156
                ||||||||||| ||||||||||||
Sbjct: 19830871 ctcgcctcccttgccgctgcgctc 19830848
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 306      gcaggtccacgacgtggcctccgacgtc 333
                |||||||| ||||||||||| |||||||
Sbjct: 22847965 gcaggtccgcgacgtggcctacgacgtc 22847938



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 28      tcgccgccgccgttgccgacgatg 51
               |||||||||||| |||||||||||
Sbjct: 2762193 tcgccgccgccgctgccgacgatg 2762170
to top
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 306   gcaggtccacgacgtggcctccgacgtc 333
             |||||||| ||||||||||| |||||||
Sbjct: 29051 gcaggtccgcgacgtggcctacgacgtc 29024
to top
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 306   gcaggtccacgacgtggcctccgacgtc 333
             |||||||| ||||||||||| |||||||
Sbjct: 37070 gcaggtccgcgacgtggcctacgacgtc 37097
to top
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tcgccgccgccgttgccgacgatg 51
              |||||||||||| |||||||||||
Sbjct: 108198 tcgccgccgccgctgccgacgatg 108221
to top
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     tcgccgccgccgttgccgacgatg 51
              |||||||||||| |||||||||||
Sbjct: 131174 tcgccgccgccgctgccgacgatg 131151
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>gb|AC134827.4| Mus musculus BAC clone RP24-470E5 from 5, complete sequence
          Length = 193811

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 119    ccgccggcctcccgctcgcctccctcgccgctgcgc 154
              |||| |||||||| | |||||||||||| |||||||
Sbjct: 181636 ccgctggcctcccccgcgcctccctcgcggctgcgc 181671


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,695,909
Number of Sequences: 3902068
Number of extensions: 2695909
Number of successful extensions: 75779
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74091
Number of HSP's gapped (non-prelim): 1688
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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