ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467805.1| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
2dbj|AK119455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
4dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
5ref|XM_322738.1| Neurospora crassa OR74A hypothetical protein (N... 48 0.026
6ref|XM_951277.1| Neurospora crassa OR74A hypothetical protein (N... 48 0.026
7emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II B... 48 0.026
8emb|AL669989.1|NCB8L21 Neurospora crassa DNA linkage group II BA... 48 0.026
9gb|AF525922.1| Chlamydomonas reinhardtii molecular marker GP220 46 0.10
10gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete se... 46 0.10
11ref|XM_467010.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
12emb|AL954676.22| Zebrafish DNA sequence from clone CH211-86M2, c... 44 0.40
13dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
14gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.6
15ref|XM_363398.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.6
16gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, com... 42 1.6
17gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, co... 42 1.6
18emb|AJ248288.1|CNSPAX06 Pyrococcus abyssi complete genome; segme... 42 1.6
19dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, c... 42 1.6
20dbj|BS000536.1| Pan troglodytes chromosome Y clone:PTB-100K06, c... 42 1.6
21gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 1.6
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.6
24dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26emb|AL163152.4|CNS01RID Human chromosome 14 DNA sequence BAC R-9... 42 1.6
27ref|NM_130147.3| Arabidopsis thaliana unknown protein AT2G45840 ... 40 6.2
28gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.2
29ref|XM_474301.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
30gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complet... 40 6.2
31gb|AF224830.1| Uncultured bacterium clone Car40rc 16S ribosomal ... 40 6.2
32emb|CR702125.2|CNS0G4PL Tetraodon nigroviridis full-length cDNA 40 6.2
33emb|CR681469.2|CNS0FORT Tetraodon nigroviridis full-length cDNA 40 6.2
34emb|AL358013.19| Human DNA sequence from clone RP11-420G9 on chr... 40 6.2
35emb|AL353636.16| Human DNA sequence from clone RP11-469E24 on ch... 40 6.2
36emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
37emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T pl... 40 6.2
38emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chr... 40 6.2
39gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map... 40 6.2
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
41gb|AC026364.36| Homo sapiens 12 BAC RP11-183N5 (Roswell Park Can... 40 6.2
42gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.2
43dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 6.2
44dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
45emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.2 
>ref|XM_467805.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2852

 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Plus

                                                                       
Query: 216 gtcatggaggatctgggcatcgaggccaaggaggcggcggtgcgcgaggtggccaagctg 275
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 178 gtcatggaggatctgggcatcgaggcgaaggaggcggccgtgcgcgaggtggcgaagctg 237

                                                                       
Query: 276 ctcccgtcccaggacctcctctcctccatcgcctccattagggccgactacctctcgcgg 335
           ||||||  || ||| |||||||||||||| |||||||| |   ||||||||||| |||||
Sbjct: 238 ctcccgctcccggagctcctctcctccattgcctccatcaaatccgactacctcgcgcgg 297

                                                          
Query: 336 cagcagacaaatgatacccaactcagttcaatggtggcagaacaggt 382
           ||||||||||||||| | || |||||| ||||||| ||||| |||||
Sbjct: 298 cagcagacaaatgatgcacagctcagtacaatggtagcagagcaggt 344



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 379 aggtcgagcaagctcatgctggcatcagcgctcttgc 415
           |||| |||||||| |||||||||||||  ||||||||
Sbjct: 505 aggttgagcaagcccatgctggcatcaatgctcttgc 541
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>dbj|AK119455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E02, full
           insert sequence
          Length = 2852

 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Plus

                                                                       
Query: 216 gtcatggaggatctgggcatcgaggccaaggaggcggcggtgcgcgaggtggccaagctg 275
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 178 gtcatggaggatctgggcatcgaggcgaaggaggcggccgtgcgcgaggtggcgaagctg 237

                                                                       
Query: 276 ctcccgtcccaggacctcctctcctccatcgcctccattagggccgactacctctcgcgg 335
           ||||||  || ||| |||||||||||||| |||||||| |   ||||||||||| |||||
Sbjct: 238 ctcccgctcccggagctcctctcctccattgcctccatcaaatccgactacctcgcgcgg 297

                                                          
Query: 336 cagcagacaaatgatacccaactcagttcaatggtggcagaacaggt 382
           ||||||||||||||| | || |||||| ||||||| ||||| |||||
Sbjct: 298 cagcagacaaatgatgcacagctcagtacaatggtagcagagcaggt 344



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 379 aggtcgagcaagctcatgctggcatcagcgctcttgc 415
           |||| |||||||| |||||||||||||  ||||||||
Sbjct: 505 aggttgagcaagcccatgctggcatcaatgctcttgc 541
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  147 bits (74), Expect = 4e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                            
Query: 216      gtcatggaggatctgggcatcgaggccaaggaggcggcggtgcgcgaggtggccaagctg 275
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 31530736 gtcatggaggatctgggcatcgaggcgaaggaggcggccgtgcgcgaggtggcgaagctg 31530677

                                                                            
Query: 276      ctcccgtcccaggacctcctctcctccatcgcctccattagggccgactacctctcgcgg 335
                ||||||  || ||| |||||||||||||| |||||||| |   ||||||||||| |||||
Sbjct: 31530676 ctcccgctcccggagctcctctcctccattgcctccatcaaatccgactacctcgcgcgg 31530617

                      
Query: 336      cagcag 341
                ||||||
Sbjct: 31530616 cagcag 31530611



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 291      ctcctctcctccatcgcctcca 312
                ||||||||||||||||||||||
Sbjct: 25903716 ctcctctcctccatcgcctcca 25903737



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 379      aggtcgagcaagctcatgctggcatcagcgctcttgc 415
                |||| |||||||| |||||||||||||  ||||||||
Sbjct: 31528593 aggttgagcaagcccatgctggcatcaatgctcttgc 31528557



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 339      cagacaaatgatacccaactcagttcaatggtggcagaacaggt 382
                |||||||||||| | || |||||| ||||||| ||||| |||||
Sbjct: 31528797 cagacaaatgatgcacagctcagtacaatggtagcagagcaggt 31528754
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>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0431B06
          Length = 154796

 Score =  147 bits (74), Expect = 4e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                         
Query: 216   gtcatggaggatctgggcatcgaggccaaggaggcggcggtgcgcgaggtggccaagctg 275
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 21296 gtcatggaggatctgggcatcgaggcgaaggaggcggccgtgcgcgaggtggcgaagctg 21237

                                                                         
Query: 276   ctcccgtcccaggacctcctctcctccatcgcctccattagggccgactacctctcgcgg 335
             ||||||  || ||| |||||||||||||| |||||||| |   ||||||||||| |||||
Sbjct: 21236 ctcccgctcccggagctcctctcctccattgcctccatcaaatccgactacctcgcgcgg 21177

                   
Query: 336   cagcag 341
             ||||||
Sbjct: 21176 cagcag 21171



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 379   aggtcgagcaagctcatgctggcatcagcgctcttgc 415
             |||| |||||||| |||||||||||||  ||||||||
Sbjct: 19153 aggttgagcaagcccatgctggcatcaatgctcttgc 19117



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 339   cagacaaatgatacccaactcagttcaatggtggcagaacaggt 382
             |||||||||||| | || |||||| ||||||| ||||| |||||
Sbjct: 19357 cagacaaatgatgcacagctcagtacaatggtagcagagcaggt 19314
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>ref|XM_322738.1| Neurospora crassa OR74A hypothetical protein (NCU03481.1) partial
           mRNA
          Length = 4035

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 134 cccctcccgctcccgctcctgccc 157
           ||||||||||||||||||||||||
Sbjct: 829 cccctcccgctcccgctcctgccc 806
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>ref|XM_951277.1| Neurospora crassa OR74A hypothetical protein (NCU03481.1) partial
           mRNA
          Length = 4035

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 134 cccctcccgctcccgctcctgccc 157
           ||||||||||||||||||||||||
Sbjct: 829 cccctcccgctcccgctcctgccc 806
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>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20
          Length = 122151

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 134   cccctcccgctcccgctcctgccc 157
             ||||||||||||||||||||||||
Sbjct: 96032 cccctcccgctcccgctcctgccc 96009
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>emb|AL669989.1|NCB8L21 Neurospora crassa DNA linkage group II BAC clone B8L21
          Length = 70704

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 134   cccctcccgctcccgctcctgccc 157
             ||||||||||||||||||||||||
Sbjct: 47752 cccctcccgctcccgctcctgccc 47775
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>gb|AF525922.1| Chlamydomonas reinhardtii molecular marker GP220
          Length = 1115

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 238 aggccaaggaggcggcggtgcgc 260
           |||||||||||||||||||||||
Sbjct: 807 aggccaaggaggcggcggtgcgc 785
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>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence
          Length = 42022

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 246   gaggcggcggtgcgcgaggtggc 268
             |||||||||||||||||||||||
Sbjct: 29693 gaggcggcggtgcgcgaggtggc 29671
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>ref|XM_467010.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 894

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 291 ctcctctcctccatcgcctcca 312
           ||||||||||||||||||||||
Sbjct: 172 ctcctctcctccatcgcctcca 193
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>emb|AL954676.22| Zebrafish DNA sequence from clone CH211-86M2, complete sequence
          Length = 160611

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 134    cccctcccgctcccgctcctgc 155
              ||||||||||||||||||||||
Sbjct: 102510 cccctcccgctcccgctcctgc 102531
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_H11
          Length = 143314

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 291   ctcctctcctccatcgcctcca 312
             ||||||||||||||||||||||
Sbjct: 55057 ctcctctcctccatcgcctcca 55078
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 251     ggcggtgcgcgaggtggccaagctg 275
               ||||||| |||||||||||||||||
Sbjct: 2274321 ggcggtgggcgaggtggccaagctg 2274345



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 296    ctcctccatcgcctccattagggccgact 324
              |||||||||||||||||  ||||||||||
Sbjct: 533643 ctcctccatcgcctccagcagggccgact 533671
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>ref|XM_363398.1| Magnaporthe grisea 70-15 hypothetical protein (MG01324.4) partial
           mRNA
          Length = 2508

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 247 aggcggcggtgcgcgaggtggccaagctg 275
           ||||| || ||||||||||||||||||||
Sbjct: 71  aggcgacgttgcgcgaggtggccaagctg 43
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>gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, complete sequence
          Length = 182113

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ccaccccccgccctcattccttcct 42
             ||||||||| |||||||||||||||
Sbjct: 98753 ccacccccctccctcattccttcct 98777
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>gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, complete sequence
          Length = 176345

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ccaccccccgccctcattccttcct 42
             ||||||||| |||||||||||||||
Sbjct: 28447 ccacccccctccctcattccttcct 28471
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>emb|AJ248288.1|CNSPAX06 Pyrococcus abyssi complete genome; segment 6/6
          Length = 265118

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 294   ctctcctccatcgcctccattagggccga 322
             |||||||||||||||||||  ||||||||
Sbjct: 98839 ctctcctccatcgcctccaaaagggccga 98867
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>dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, complete sequence
          Length = 219969

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ccaccccccgccctcattccttcct 42
             ||||||||| |||||||||||||||
Sbjct: 47862 ccacccccctccctcattccttcct 47886
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>dbj|BS000536.1| Pan troglodytes chromosome Y clone:PTB-100K06, complete sequences
          Length = 204391

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    ccaccccccgccctcattccttcct 42
             ||||||||| |||||||||||||||
Sbjct: 22140 ccacccccctccctcattccttcct 22116
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 18       ccaccccccgccctcattccttcct 42
                ||||||||| |||||||||||||||
Sbjct: 20911135 ccacccccctccctcattccttcct 20911111
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 135      ccctcccgctcccgctcctgc 155
                |||||||||||||||||||||
Sbjct: 18465953 ccctcccgctcccgctcctgc 18465933
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 256     tgcgcgaggtggccaagctgc 276
               |||||||||||||||||||||
Sbjct: 4027335 tgcgcgaggtggccaagctgc 4027355
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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   ccctcccgctcccgctcctgc 155
             |||||||||||||||||||||
Sbjct: 57801 ccctcccgctcccgctcctgc 57781
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>dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101L24, full
           insert sequence
          Length = 1630

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ccctcccgctcccgctcctgc 155
           |||||||||||||||||||||
Sbjct: 143 ccctcccgctcccgctcctgc 123
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>emb|AL163152.4|CNS01RID Human chromosome 14 DNA sequence BAC R-98N22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159772

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     caccaccccccgccctcattc 36
              |||||||||||||||||||||
Sbjct: 104215 caccaccccccgccctcattc 104235
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>ref|NM_130147.3| Arabidopsis thaliana unknown protein AT2G45840 mRNA, complete cds
          Length = 1597

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 acgtgagaactcatagatat 461
           ||||||||||||||||||||
Sbjct: 39  acgtgagaactcatagatat 20
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     catcgaggccaaggaggcgg 252
               ||||||||||||||||||||
Sbjct: 1261135 catcgaggccaaggaggcgg 1261154
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>ref|XM_474301.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 858

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 136 cctcccgctcccgctcctgcccgc 159
           ||||||||||||||||| ||||||
Sbjct: 145 cctcccgctcccgctcccgcccgc 122
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>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence
          Length = 56458

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ggcggcggtgcgcgaggtgg 267
             ||||||||||||||||||||
Sbjct: 40457 ggcggcggtgcgcgaggtgg 40438
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>gb|AF224830.1| Uncultured bacterium clone Car40rc 16S ribosomal RNA gene, partial
           sequence
          Length = 605

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ccttcctccggttaaaacac 55
           ||||||||||||||||||||
Sbjct: 281 ccttcctccggttaaaacac 262
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>emb|CR702125.2|CNS0G4PL Tetraodon nigroviridis full-length cDNA
          Length = 1706

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gaggtggccaagctgctccc 280
           ||||||||||||||||||||
Sbjct: 726 gaggtggccaagctgctccc 745
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>emb|CR681469.2|CNS0FORT Tetraodon nigroviridis full-length cDNA
          Length = 1510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gaggtggccaagctgctccc 280
           ||||||||||||||||||||
Sbjct: 517 gaggtggccaagctgctccc 536
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>emb|AL358013.19| Human DNA sequence from clone RP11-420G9 on chromosome 1 Contains the
             5' end of the KIF1B gene for kinesin family member 1B and
             a CpG island, complete sequence
          Length = 171612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   gttcaatggtggcagaacag 380
             ||||||||||||||||||||
Sbjct: 26764 gttcaatggtggcagaacag 26745
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>emb|AL353636.16| Human DNA sequence from clone RP11-469E24 on chromosome 9 Contains part
             of a novel gene containing DFKp434G2311, complete sequence
          Length = 71538

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    ctctccaccaccccccgccc 30
             ||||||||||||||||||||
Sbjct: 28512 ctctccaccaccccccgccc 28531
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>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12,
              complete sequence
          Length = 190432

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 136    cctcccgctcccgctcctgcccgc 159
              ||||||||||||||||| ||||||
Sbjct: 183905 cctcccgctcccgctcccgcccgc 183928
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>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome
          Length = 101016

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 251   ggcggtgcgcgaggtggccaagctgctc 278
             ||||||||||| ||||||| ||||||||
Sbjct: 85837 ggcggtgcgcgcggtggccgagctgctc 85810
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>emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chromosome 11 Contains a
             novel pseudogene, complete sequence
          Length = 166549

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   ccctcccgctcccgctcctg 154
             ||||||||||||||||||||
Sbjct: 86884 ccctcccgctcccgctcctg 86903
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>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete
             sequence
          Length = 101647

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   acgtgagaactcatagatat 461
             ||||||||||||||||||||
Sbjct: 57617 acgtgagaactcatagatat 57636
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 136      cctcccgctcccgctcctgcccgc 159
                ||||||||||||||||| ||||||
Sbjct: 34272523 cctcccgctcccgctcccgcccgc 34272546
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>gb|AC026364.36| Homo sapiens 12 BAC RP11-183N5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 40011

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   cccctcccgctcccgctcct 153
             ||||||||||||||||||||
Sbjct: 32954 cccctcccgctcccgctcct 32973
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 77      tcgtcgcgatctccgtcccc 96
               ||||||||||||||||||||
Sbjct: 2748458 tcgtcgcgatctccgtcccc 2748477
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    aggccaaggaggcggcggtg 257
              ||||||||||||||||||||
Sbjct: 822567 aggccaaggaggcggcggtg 822586
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     ggcggcggtgcgcgaggtgg 267
               ||||||||||||||||||||
Sbjct: 1228416 ggcggcggtgcgcgaggtgg 1228397
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>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete
             sequence
          Length = 95419

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   cctcccgctcccgctcctgcccgc 159
             ||||||||||||||||| ||||||
Sbjct: 55138 cctcccgctcccgctcccgcccgc 55161


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,968,481
Number of Sequences: 3902068
Number of extensions: 2968481
Number of successful extensions: 63874
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63115
Number of HSP's gapped (non-prelim): 759
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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