>NAGS_HUMAN (Q8N159) N-acetylglutamate synthase, mitochondrial precursor (EC|
           2.3.1.1) (Amino-acid acetyltransferase) [Contains:
           N-acetylglutamate synthase long form; N-acetylglutamate
           synthase short form; N-acetylglutamate synthase
           conserved domain form]
          Length = 534

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -2

Query: 360 LHCRSNRRAV*LASCATNGRSCSSRRTYPF*NPEDYHSQSRYAQSP----PSWPPVPR 199
           L C + RRA   A   + GR  S+  + P   PE+Y      +QSP    PSW P PR
Sbjct: 31  LSCGARRRA---ARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAEEPSWVPSPR 85

>SWR1_KLULA (Q6CJ38) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1572

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 246 DYDNLPDFRKGMSVLTNRIFHLWHMMRATQHAGLIGNEGESMET 377
           D+  L   R    +LTN +FHLW      ++  L  N   S +T
Sbjct: 6   DWRQLAKTRLEYELLTNELFHLWEFTSLVEYDPLFRNTSNSFKT 49

>IKBA_CHICK (Q91974) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha) (REL-associated protein pp40)
          Length = 318

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
 Frame = -3

Query: 332 CSSHHVPQMEDPVRQDGHTLSEIRKIIIVRVAMRNLLHLG--LLCLDP--SHTLLH---- 177
           C  HH+  +      +GHT   +  I      +  LL LG  +   +P    T LH    
Sbjct: 171 CQPHHLLAVLQATNYNGHTCLHLASIQGYLAVVEYLLSLGADVNAQEPCNGRTALHLAVD 230

Query: 176 -ADSSLIELLNKHGP 135
             +S L+ LL KHGP
Sbjct: 231 LQNSDLVSLLVKHGP 245

>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 252 HSQSRYAQSPPSWPPVPRS--IAYSPA 178
           HS+ RY ++PPS PP P    +A SPA
Sbjct: 56  HSRHRYPETPPSLPPPPSPGILATSPA 82

>TRM1_SULTO (Q971V9) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC|
           2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase)
           (tRNA 2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 374

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 267 NPEDYHSQSRYAQSPPSWPPVPRSIAYSPACRFQPD 160
           NP+DY  + RY    PSW PV     Y+P  R   D
Sbjct: 17  NPKDYEKEGRY---DPSWSPV----FYNPKMRLNRD 45

>B4GT3_PONPY (Q5NVN3) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N
          Length = 393

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 282 TYPF*NPEDYHSQSRYAQSPPSWPPVPRSIAYSP 181
           T+ + +P D +S   +    P  PP P+ + Y P
Sbjct: 45  TFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCP 78

>B4GT3_HUMAN (O60512) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N
          Length = 393

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 282 TYPF*NPEDYHSQSRYAQSPPSWPPVPRSIAYSP 181
           T+ + +P D +S   +    P  PP P+ + Y P
Sbjct: 45  TFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCP 78

>SPON1_BOVIN (Q9GLX9) Spondin-1 precursor (F-spondin) (Vascular smooth muscle|
           cell growth-promoting factor)
          Length = 807

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 183 ESMRWIEAQEAKMEEIAHSDSDYDNLPDFR 272
           +++RW EA+E++  E    +SD D  P  R
Sbjct: 727 QNLRWREARESRRSEQLREESDGDQFPGCR 756

>PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Ephrin-interacting protein) (PHIP)
          Length = 1333

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 10/36 (27%)
 Frame = +3

Query: 192 RWIEAQE----------AKMEEIAHSDSDYDNLPDF 269
           RW+E QE          +++E + H+D+  +N+P+F
Sbjct: 231 RWLEKQEQDEEGTEEDSSRVEPVGHADTGLENMPNF 266

>MINC_SYNEL (Q8DHE3) Probable septum site-determining protein minC|
          Length = 266

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 234 HSDSDYDNLPDFRKGMSVLTNRIFHLWHMMRATQHAGLIGNEGESMET 377
           H D+    + D   G S++      +W  +R   HAG  GN G  + T
Sbjct: 165 HHDASVIIVGDVNAGASIIAAGDIIVWGRLRGVAHAGAKGNLGARIMT 212

>KIF2_MOUSE (P28740) Kinesin-like protein KIF2|
          Length = 716

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 180 QESMRWIEAQEAKMEEIAHSDSDYDN 257
           QES+RWIE ++A +E     D D D+
Sbjct: 643 QESIRWIEDEKALLEMTEEVDYDVDS 668

>PARD3_RAT (Q9Z340) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Atypical PKC-specific-binding protein) (ASBP)
          Length = 1337

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 10/36 (27%)
 Frame = +3

Query: 192 RWIEAQE----------AKMEEIAHSDSDYDNLPDF 269
           RW+E QE          +++E + H+D+  +N+P+F
Sbjct: 231 RWLEKQEQDEEGTEEDSSRVEPVGHADTGLENMPNF 266

>MCR_HUMAN (P08235) Mineralocorticoid receptor (MR)|
          Length = 984

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 351 RSNRRAV*LASCATNGRSCSSRRTYPF*NPEDYHSQSRYAQSPPSWPPVPRS 196
           R N  A  L  C   G +  +R++      +  H +    Q PP  PP P+S
Sbjct: 652 RKNCPACRLQKCLQAGMNLGARKSKKLGKLKGIHEEQPQQQQPPPPPPPPQS 703

>MCR_AOTNA (Q3YC04) Mineralocorticoid receptor (MR)|
          Length = 984

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 351 RSNRRAV*LASCATNGRSCSSRRTYPF*NPEDYHSQSRYAQSPPSWPPVPRS 196
           R N  A  L  C   G +  +R++      +  H +    Q PP  PP P+S
Sbjct: 652 RKNCPACRLQKCLQAGMNLGARKSKKLGKLKGIHEEQPQQQQPPPPPPPPQS 703

>NOL9_HUMAN (Q5SY16) Nucleolar protein 9|
          Length = 702

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = -3

Query: 311 QMEDPVRQDGHTLSEIRKIIIVRVAMRNLLHLGLLCLDPSHTLLHADSSLIELLNKHGPA 132
           + E PV   GH L  +      R+  RN           SH  +  D S++  L++  P 
Sbjct: 484 EKESPVEFTGHKLIGVYTDFAFRITPRNR---------ESHNKILRDLSILSYLSQLQPP 534

Query: 131 TPSPRTP 111
            P P +P
Sbjct: 535 MPKPLSP 541

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -2

Query: 282 TYPF*NPEDYHSQSRYAQSPPSW-PPVPRSIAYSPACRFQPDRA--PQ*TWTRHSFPSNP 112
           TY    P   +S S   Q PP++ PP P  +  +P+    P R   PQ    RH+ P++ 
Sbjct: 182 TYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTPS---PPSRGHQPQPPTHRHAPPTHR 238

Query: 111 LRRPSH 94
              P+H
Sbjct: 239 HAPPTH 244

>NDC1_RAT (Q6AXN4) Nucleoporin NDC1 (Transmembrane protein 48)|
          Length = 673

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 321 SCATNGRSCSSRRTYP--F*NPEDYHSQSRYAQSPPSWPPVPRSIAYSP 181
           + ATNGR  SS    P    +PE+   Q+      PS PP+ ++  +SP
Sbjct: 387 AAATNGRMYSSYSVEPKRLSSPEETAFQTPKPSQMPSVPPLVKTSLFSP 435

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 10/67 (14%)
 Frame = -2

Query: 264 PEDYHSQSRY---------AQSPPSWPPVPRSIAYSPACRFQPDRA-PQ*TWTRHSFPSN 115
           PE   SQS Y          Q+PP +P  P   +Y P  +  PD   P         PSN
Sbjct: 723 PEQQPSQSPYWPQPAPSYPGQAPPPYPSYPPCPSYPPPGQSAPDAGKPPAQLDEGVSPSN 782

Query: 114 PLRRPSH 94
           P   P+H
Sbjct: 783 P---PAH 786

>ATSA_KLEPN (Q9X759) Arylsulfatase precursor (EC 3.1.6.1) (AS) (Aryl-sulfate|
           sulphohydrolase)
          Length = 577

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -2

Query: 264 PEDYHSQSRYAQSPPSWPPVPRSIAYSPACRFQPDRAPQ*TWTRHSFPSNPLRRP 100
           P+D++S   YA+   SW             +  P   P   W   + P +PL+ P
Sbjct: 188 PDDFYSSEAYARQMNSW------------IKATPKEQPVFAWLAFTAPHDPLQAP 230

>ABI3_ARATH (Q01593) Abscisic acid-insensitive protein 3|
          Length = 720

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 231 QSPPSWPPVPRS 196
           +SPPSWPP P+S
Sbjct: 388 ESPPSWPPPPQS 399

>ADA2B_TALEU (O19091) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 397

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 327 LASCATNGRSCSSRRTYPF*NPEDYHSQSRYAQSPPSWPPVPRS 196
           +A+  TNGRS  +        PED    S  +  PPSWP +P S
Sbjct: 229 VAAGETNGRSKPTGEKEMGETPED----SGTSTLPPSWPALPNS 268

>ATSA_KLEAE (P20713) Arylsulfatase precursor (EC 3.1.6.1) (AS) (Aryl-sulfate|
           sulphohydrolase)
          Length = 464

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -2

Query: 264 PEDYHSQSRYAQSPPSWPPVPRSIAYSPACRFQPDRAPQ*TWTRHSFPSNPLRRP 100
           P+D++S   YA+   SW             +  P   P   W   + P +PL+ P
Sbjct: 188 PDDFYSSEAYARQMNSW------------IKATPKEQPVFAWLAFTAPHDPLQAP 230

>MINC_PROMA (Q7VDL2) Probable septum site-determining protein minC|
          Length = 221

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +3

Query: 225 EIAHSDSDYDNLPDFRKGMSVLTNRIFHLWHMMRATQHAGLIGN 356
           E+  +D D   L D   G +VL      +W  +    HAG  GN
Sbjct: 126 EVLEADEDILILGDVNPGATVLAGGNVMIWGRLLGIAHAGKYGN 169

>KCNB1_RABIT (Q9MZ19) Potassium voltage-gated channel subfamily B member 1|
           (Voltage-gated potassium channel subunit Kv2.1)
          Length = 858

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 324 ASCATNGRSCSSRRTYPF*NPEDYHSQSRYAQSPPSWPPVPRSIAYS 184
           A+ A  G  C++    P  +PE     +  A++PP  P  P +IA++
Sbjct: 701 AAAAVAGLECATLLDKPVLSPESSIYTTASARTPPRSPEKPTAIAFN 747

>FRM4A_HUMAN (Q9P2Q2) FERM domain-containing protein 4A|
          Length = 1024

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -2

Query: 369 SIHLHCRSNRRAV*LASCATNGRSCSSRRTYPF*NPEDYHSQSRYAQSP------PSWPP 208
           S H H  S++R     SCA  G   +S +  P      ++SQS    +P      P +  
Sbjct: 612 SSHSHSSSHKRFPSTGSCAEAGGGSNSLQNSPIRGLPHWNSQSSMPSTPDLRVRSPHYVH 671

Query: 207 VPRSIAYSP 181
             RS+  SP
Sbjct: 672 STRSVDISP 680


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,513,195
Number of Sequences: 219361
Number of extensions: 976724
Number of successful extensions: 3243
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3241
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)