ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41b08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450936.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2035 Score = 123 bits (62), Expect = 5e-25 Identities = 128/150 (85%) Strand = Plus / Plus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 379 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 438 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || ||||||||||||||||| ||||| || || |||| Sbjct: 439 gcagggggctgaagcggaagctggggtgcatcgagtccgccacccggatggggcggaaga 498 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 499 agcggctcgagagcgagtacgagctcggcg 528 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 212 gtcgctgccgcggaagcgcaagggcgcgcgctcc 245
>ref|XM_450937.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 123 bits (62), Expect = 5e-25 Identities = 128/150 (85%) Strand = Plus / Plus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 463 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 522 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || ||||||||||||||||| ||||| || || |||| Sbjct: 523 gcagggggctgaagcggaagctggggtgcatcgagtccgccacccggatggggcggaaga 582 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 583 agcggctcgagagcgagtacgagctcggcg 612 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 296 gtcgctgccgcggaagcgcaagggcgcgcgctcc 329
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 123 bits (62), Expect = 5e-25 Identities = 128/150 (85%) Strand = Plus / Minus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 17683315 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 17683256 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || ||||||||||||||||| ||||| || || |||| Sbjct: 17683255 gcagggggctgaagcggaagctggggtgcatcgagtccgccacccggatggggcggaaga 17683196 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 17683195 agcggctcgagagcgagtacgagctcggcg 17683166 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 17683482 gtcgctgccgcggaagcgcaagggcgcgcgctcc 17683449 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 11777703 cgccggctccctccacgacgac 11777682 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 ctccgccggcggcgatgacgccgccacc 241 |||||||| |||||| |||||||||||| Sbjct: 19224393 ctccgccgccggcgacgacgccgccacc 19224366 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgccgcctagggtttccacc 72 |||||||||||||||||||| Sbjct: 16495035 cgccgcctagggtttccacc 16495016
>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12 Length = 150588 Score = 123 bits (62), Expect = 5e-25 Identities = 128/150 (85%) Strand = Plus / Minus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 132037 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 131978 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || ||||||||||||||||| ||||| || || |||| Sbjct: 131977 gcagggggctgaagcggaagctggggtgcatcgagtccgccacccggatggggcggaaga 131918 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 131917 agcggctcgagagcgagtacgagctcggcg 131888 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 132204 gtcgctgccgcggaagcgcaagggcgcgcgctcc 132171
>dbj|AK122120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G18, full insert sequence Length = 2035 Score = 123 bits (62), Expect = 5e-25 Identities = 128/150 (85%) Strand = Plus / Plus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 379 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 438 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || ||||||||||||||||| ||||| || || |||| Sbjct: 439 gcagggggctgaagcggaagctggggtgcatcgagtccgccacccggatggggcggaaga 498 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 499 agcggctcgagagcgagtacgagctcggcg 528 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 212 gtcgctgccgcggaagcgcaagggcgcgcgctcc 245
>dbj|AK067322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106F10, full insert sequence Length = 3431 Score = 123 bits (62), Expect = 5e-25 Identities = 128/150 (85%) Strand = Plus / Minus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 1473 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 1414 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || ||||||||||||||||| ||||| || || |||| Sbjct: 1413 gcagggggctgaagcggaagctggggtgcatcgagtccgccacccggatggggcggaaga 1354 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 1353 agcggctcgagagcgagtacgagctcggcg 1324 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 1640 gtcgctgccgcggaagcgcaagggcgcgcgctcc 1607
>dbj|AK109479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H01, full insert sequence Length = 2059 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 252 gcggcggcgtggtcatgacggcgccgccggccagcggccgggccaccccggacagccccg 311 |||| ||||||||| ||||||||| || || |||||||||||| | ||||| |||||| Sbjct: 463 gcgggggcgtggtccagacggcgccccccgcgagcggccgggccgcgccggagagcccca 522 Query: 312 ggagggggctcaagcgcaaggtcggctgcatcgagtccgccacgcggataggccgcaaga 371 | |||||||| ||||| ||| | || |||||||||||||||| ||||| || || |||| Sbjct: 523 gcagggggctgaagcggaagctggggcgcatcgagtccgccacccggatggggcggaaga 582 Query: 372 agcgcctcgagaccgagtacgagctcggcg 401 |||| ||||||| ||||||||||||||||| Sbjct: 583 agcggctcgagagcgagtacgagctcggcg 612 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 91 gtcgcttccgcggaagcgcaagggcgcgcgctcc 124 |||||| ||||||||||||||||||||||||||| Sbjct: 296 gtcgctgccgcggaagcgcaagggcgcgcgctcc 329
>ref|XM_473482.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 232 cgccgccaccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||||||||| Sbjct: 523 cgccgccaccgccaccggccgcggcggcgt 494
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 232 cgccgccaccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||||||||| Sbjct: 43319 cgccgccaccgccaccggccgcggcggcgt 43348
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 232 cgccgccaccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||||||||| Sbjct: 28036093 cgccgccaccgccaccggccgcggcggcgt 28036122 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 546384 cgccggctccctccacgacgac 546405 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cacgccgccgcctagggttt 67 |||||||||||||||||||| Sbjct: 31185470 cacgccgccgcctagggttt 31185451
>dbj|AK106001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H12, full insert sequence Length = 2095 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 232 cgccgccaccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||||||||| Sbjct: 821 cgccgccaccgccaccggccgcggcggcgt 792
>gb|AE005114.1| Halobacterium sp. NRC-1 section 145 of 170 of the complete genome Length = 9825 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 229 tgacgccgccaccgcctccggccgcggcggcgt 261 |||||||||||||||| ||| |||||||||||| Sbjct: 6355 tgacgccgccaccgccgccgcccgcggcggcgt 6323
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 126 tcgccggctccctccacgacgac 148 ||||||||||||||||||||||| Sbjct: 8020646 tcgccggctccctccacgacgac 8020668
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 126 tcgccggctccctccacgacgac 148 ||||||||||||||||||||||| Sbjct: 8020527 tcgccggctccctccacgacgac 8020549
>emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151117 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 126 tcgccggctccctccacgacgac 148 ||||||||||||||||||||||| Sbjct: 123032 tcgccggctccctccacgacgac 123010
>ref|XM_480169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 231 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 aagaagccctccgccggcggcg 227 |||||||||||||||||||||| Sbjct: 148 aagaagccctccgccggcggcg 169
>ref|XM_450610.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 117 cgccggctccctccacgacgac 96
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 38238 cgccggctccctccacgacgac 38217
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 138773 cgccggctccctccacgacgac 138752
>gb|AY246907.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) mRNA, complete cds Length = 1293 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 252 gcggcggcgtggtcatgacggcgccgccgg 281 |||||||||||| |||||||||||||||| Sbjct: 243 gcggcggcgtggagatgacggcgccgccgg 272
>gb|AY246906.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) gene, complete cds Length = 2346 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 252 gcggcggcgtggtcatgacggcgccgccgg 281 |||||||||||| |||||||||||||||| Sbjct: 1124 gcggcggcgtggagatgacggcgccgccgg 1153
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 gccgccggccagcggccgggcc 295 |||||||||||||||||||||| Sbjct: 45807 gccgccggccagcggccgggcc 45786
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 77350 cgccggctccctccacgacgac 77371
>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains part of the gene for a novel protein similar to axonemal dynein heavy polypeptide (DNAH), complete sequence Length = 127451 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 cccgagaagaagaaaaagaagc 212 |||||||||||||||||||||| Sbjct: 13235 cccgagaagaagaaaaagaagc 13214
>ref|NM_170379.2| Drosophila melanogaster CG31048-RA (CG31048), mRNA Length = 6543 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgatgacgccgccaccgcctcc 247 |||||||||||||||||||||| Sbjct: 6125 cgatgacgccgccaccgcctcc 6146
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 gacggcgccgccggccagcggccggg 293 ||||||||||||||||| |||||||| Sbjct: 4216179 gacggcgccgccggccaccggccggg 4216204
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gcccgagaagaagaaaaagaag 211 |||||||||||||||||||||| Sbjct: 4305708 gcccgagaagaagaaaaagaag 4305729
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 17628625 cgccggctccctccacgacgac 17628604 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 4362562 ccgagaagaagaaaaagaag 4362581
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 aagaagccctccgccggcggcg 227 |||||||||||||||||||||| Sbjct: 3238424 aagaagccctccgccggcggcg 3238445 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 cggcggcgatgacgccgccaccgcc 244 ||||||||||||||||||| ||||| Sbjct: 20344172 cggcggcgatgacgccgccgccgcc 20344196 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgccgccaccgcctccggcc 251 |||||||||||||||||||| Sbjct: 22952546 cgccgccaccgcctccggcc 22952565 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 3681055 caccgcctccggcggcggcggcgt 3681032
>gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome 3R, region 98E2-98F2, BAC clone BACR48K07, complete sequence Length = 168471 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgatgacgccgccaccgcctcc 247 |||||||||||||||||||||| Sbjct: 84891 cgatgacgccgccaccgcctcc 84912
>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR13H19, complete sequence Length = 155666 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgatgacgccgccaccgcctcc 247 |||||||||||||||||||||| Sbjct: 20722 cgatgacgccgccaccgcctcc 20743
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 ccgccggcggcgatgacgccgc 237 |||||||||||||||||||||| Sbjct: 5668634 ccgccggcggcgatgacgccgc 5668655
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 20521 cgccggctccctccacgacgac 20500
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 aagaagccctccgccggcggcg 227 |||||||||||||||||||||| Sbjct: 15991 aagaagccctccgccggcggcg 16012
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgatgacgccgccaccgcctcc 247 |||||||||||||||||||||| Sbjct: 67992 cgatgacgccgccaccgcctcc 68013
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 331 ggtcggctgcatcgagtccgcc 352 |||||||||||||||||||||| Sbjct: 201239 ggtcggctgcatcgagtccgcc 201218
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cgccggctccctccacgacgac 148 |||||||||||||||||||||| Sbjct: 17723356 cgccggctccctccacgacgac 17723335 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 4371256 ccgagaagaagaaaaagaag 4371275
>ref|XM_482467.1| Oryza sativa (japonica cultivar-group), mRNA Length = 834 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 cggcggcgatgacgccgccaccgcc 244 ||||||||||||||||||| ||||| Sbjct: 309 cggcggcgatgacgccgccgccgcc 333
>gb|AF026276.1| Homo sapiens fast skeletal troponin T (TNNT3) gene, complete cds Length = 20369 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 gggtttccaccccccgcccct 82 ||||||||||||||||||||| Sbjct: 1201 gggtttccaccccccgcccct 1181
>ref|XM_792039.1| PREDICTED: Strongylocentrotus purpuratus similar to MASK-4E-BP3 protein (LOC592521), partial mRNA Length = 5635 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cggcccgagaagaagaaaaagaagc 212 |||| |||||||||||||||||||| Sbjct: 3631 cggcgcgagaagaagaaaaagaagc 3655
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 gccggcggcgatgacgccgcc 238 ||||||||||||||||||||| Sbjct: 25059 gccggcggcgatgacgccgcc 25079
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 gccggcggcgatgacgccgcc 238 ||||||||||||||||||||| Sbjct: 319981 gccggcggcgatgacgccgcc 320001
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gccggcggcgatgacgccgcc 238 ||||||||||||||||||||| Sbjct: 257851 gccggcggcgatgacgccgcc 257831
>gb|AE012393.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 301 of 460 of the complete genome Length = 11733 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ccgccaccgcctccggccgcg 254 ||||||||||||||||||||| Sbjct: 9635 ccgccaccgcctccggccgcg 9655
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ccgccaccgcctccggccgcg 254 ||||||||||||||||||||| Sbjct: 1588083 ccgccaccgcctccggccgcg 1588063
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 cggcggcgatgacgccgccaccgcc 244 ||||||||||||||||||| ||||| Sbjct: 91920 cggcggcgatgacgccgccgccgcc 91944
>ref|XM_552447.1| Anopheles gambiae str. PEST ENSANGP00000029456 (ENSANGG00000021803), partial mRNA Length = 1416 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 cgccgccggccagcggccggg 293 ||||||||||||||||||||| Sbjct: 644 cgccgccggccagcggccggg 664
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tccacgacgactcggcggac 157 |||||||||||||||||||| Sbjct: 19171 tccacgacgactcggcggac 19190
>ref|NM_189106.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1874 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 537 caccgcctccggcggcggcggcgt 560
>ref|XM_507140.1| PREDICTED Oryza sativa (japonica cultivar-group), P0577B11.136 mRNA Length = 1953 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 611 caccgcctccggcggcggcggcgt 634
>ref|XM_467309.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2007 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gagaagaagaaaaagaagcc 213 |||||||||||||||||||| Sbjct: 1843 gagaagaagaaaaagaagcc 1862
>ref|XM_465375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||| ||||| ||||||||||||||| Sbjct: 233 gccgccgccgccgccggccgcggcggcg 206
>ref|XM_470549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4449 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||||||||| ||||| ||||||||| Sbjct: 246 gccgccaccgccgccggcggcggcggcg 219
>gb|AY970030.1| Uncultured ascomycete isolate dfmo0726_130 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 535 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gccgggagcggaagccgcggcccg 194 ||||| |||||||||||||||||| Sbjct: 131 gccggcagcggaagccgcggcccg 108
>gb|AY969930.1| Uncultured ascomycete isolate dfmo0726_023 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 535 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gccgggagcggaagccgcggcccg 194 ||||| |||||||||||||||||| Sbjct: 131 gccggcagcggaagccgcggcccg 108
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 144072 ccgagaagaagaaaaagaag 144091
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 13925 ccgagaagaagaaaaagaag 13944
>ref|XM_603708.2| PREDICTED: Bos taurus similar to T-cell activation protein phosphatase 2C (LOC525355), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgccgccaccgcctccggcc 251 |||||||||||||||||||| Sbjct: 385 cgccgccaccgcctccggcc 366
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 ctccgccggcggcgatgacgccgccacc 241 |||||||| |||||| |||||||||||| Sbjct: 7609 ctccgccgccggcgacgacgccgccacc 7582
>ref|XM_952114.1| Neurospora crassa OR74A hypothetical protein (NCU01784.1) partial mRNA Length = 1827 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 182 ccgagaagaagaaaaagaag 201
>ref|XM_328222.1| Neurospora crassa OR74A hypothetical protein (NCU01784.1) partial mRNA Length = 1827 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 182 ccgagaagaagaaaaagaag 201
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 cgccggcggcgatgacgccgccaccgcc 244 |||||| |||||||| |||||||||||| Sbjct: 1885642 cgccgggggcgatgaagccgccaccgcc 1885615
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ccggccgcggcggcgtggtc 265 |||||||||||||||||||| Sbjct: 2409224 ccggccgcggcggcgtggtc 2409243
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||||||||| ||||| ||||||||| Sbjct: 4261379 gccgccaccgccgccggcggcggcggcg 4261352
>ref|XM_994681.1| PREDICTED: Mus musculus adenomatosis polyposis coli down-regulated 1 (Apcdd1), mRNA Length = 5662 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 239 gggcgcgcgctccctcgccg 220
>ref|XM_914219.2| PREDICTED: Mus musculus adenomatosis polyposis coli down-regulated 1 (Apcdd1), mRNA Length = 5662 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 239 gggcgcgcgctccctcgccg 220
>ref|XM_619546.3| PREDICTED: Mus musculus adenomatosis polyposis coli down-regulated 1 (Apcdd1), mRNA Length = 5662 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 239 gggcgcgcgctccctcgccg 220
>gb|AC092123.4| Homo sapiens chromosome 16 clone RP11-104N10, complete sequence Length = 112519 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gcgcgcgctccctcgccggc 133 |||||||||||||||||||| Sbjct: 9243 gcgcgcgctccctcgccggc 9262
>gb|AC140554.3| Mus musculus BAC clone RP23-151C18 from chromosome 18, complete sequence Length = 215716 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 54187 gggcgcgcgctccctcgccg 54168
>gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosome 7, complete sequence Length = 186045 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gggtttccaccccccgcccc 81 |||||||||||||||||||| Sbjct: 87845 gggtttccaccccccgcccc 87864
>gb|AC009261.5|ATAC009261 Arabidopsis thaliana chromosome III BAC T26P13 genomic sequence, complete sequence Length = 79122 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 6082 ccgagaagaagaaaaagaag 6063
>gb|AC130204.4| Mus musculus BAC clone RP24-427M16 from chromosome 18, complete sequence Length = 167394 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 112697 gggcgcgcgctccctcgccg 112678
>gb|AF082663.3| Rhodococcus sp. NCIMB12038 naphthalene degradation gene cluster, complete sequence Length = 11548 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgcctcgagaccgagtacg 392 |||||||||||||||||||| Sbjct: 5775 gcgcctcgagaccgagtacg 5794
>gb|AC162802.4| Mus musculus BAC clone RP23-363M4 from chromosome 5, complete sequence Length = 234206 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcccgatccccaacccccat 28 |||||||||||||||||||| Sbjct: 226835 tcccgatccccaacccccat 226854
>emb|AL356963.17| Human DNA sequence from clone RP11-535A9 on chromosome 6, complete sequence Length = 91469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agaagaagaaaaagaagccc 214 |||||||||||||||||||| Sbjct: 75884 agaagaagaaaaagaagccc 75865
>emb|AL359392.9| Human DNA sequence from clone RP11-332E3 on chromosome 13 Contains the 3' end of the LMO7 gene for LIM domain only 7(KIAA0858) and a novel gene, complete sequence Length = 150488 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gaagaagaaaaagaagccct 215 |||||||||||||||||||| Sbjct: 36098 gaagaagaaaaagaagccct 36117
>emb|AL137060.13| Human DNA sequence from clone RP11-34F20 on chromosome 13 Contains the 3' end of the RFP2 gene for ret finger protein 2, the DLEU2 gene for deleted in lymphocytic leukemia 2 (LEU2 BCMSUN), the 5' end of the DLEU1 gene for deleted in lymphocytic leukemia 1 (BCMS LEU1), a ribosomal protein L18 (RPL18) pseudogene, a novel gene and four CpG islands, complete sequence Length = 154887 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ctccctcgccggctccctcc 140 |||||||||||||||||||| Sbjct: 123822 ctccctcgccggctccctcc 123841
>gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, complete sequence Length = 210031 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gcgcgcgctccctcgccggc 133 |||||||||||||||||||| Sbjct: 165176 gcgcgcgctccctcgccggc 165195
>gb|BT023775.1| Drosophila melanogaster LD29573 full insert cDNA Length = 2504 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagaagaaaaagaagc 212 |||||||||||||||||||| Sbjct: 139 cgagaagaagaaaaagaagc 158
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caagggcgcgcgctccctcg 128 |||||||||||||||||||| Sbjct: 2292890 caagggcgcgcgctccctcg 2292871
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 cgccgccggccagcggccgggcca 296 |||||||||||||| ||||||||| Sbjct: 140097 cgccgccggccagctgccgggcca 140120
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 cgccgccggccagcggccgggcca 296 |||||||||||||| ||||||||| Sbjct: 63151 cgccgccggccagctgccgggcca 63174
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcctccggccgcggcggcgtggtc 265 |||||||||||| ||||||||||| Sbjct: 9663 gcctccggccgcagcggcgtggtc 9640
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 accgcctccggccgcggcggcgtg 262 |||||| ||||||||||||||||| Sbjct: 92448 accgccgccggccgcggcggcgtg 92425
>ref|NM_001007864.1| Xenopus tropicalis surfeit 6 (surf6), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 agaagaagaaaaagaagccc 214 |||||||||||||||||||| Sbjct: 240 agaagaagaaaaagaagccc 259
>emb|AL669999.1|NCB21D9 Neurospora crassa DNA linkage group II BAC clone B21D9 Length = 71024 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 56737 ccgagaagaagaaaaagaag 56718
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cacgccgccgcctagggttt 67 |||||||||||||||||||| Sbjct: 7071 cacgccgccgcctagggttt 7052
>gb|BC079967.1| Xenopus tropicalis surfeit 6, mRNA (cDNA clone MGC:79828 IMAGE:6987118), complete cds Length = 1416 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 agaagaagaaaaagaagccc 214 |||||||||||||||||||| Sbjct: 240 agaagaagaaaaagaagccc 259
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cgccggcggcgatgacgccg 236 |||||||||||||||||||| Sbjct: 2756017 cgccggcggcgatgacgccg 2755998
>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181004 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgagaagaagaaaaagaagc 212 |||||||||||||||||||| Sbjct: 5425 cgagaagaagaaaaagaagc 5406
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194589 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagaagaaaaagaagc 212 |||||||||||||||||||| Sbjct: 29117 cgagaagaagaaaaagaagc 29136
>ref|NM_168172.1| Drosophila melanogaster CG8368-RB, transcript variant B (CG8368), mRNA Length = 2458 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagaagaaaaagaagc 212 |||||||||||||||||||| Sbjct: 109 cgagaagaagaaaaagaagc 128
>dbj|AB206671.1| Rhodococcus opacus o-xylene oxygenase gene cluster (nidE, nidF, nidA, nidB, nidC, nidD), complete cds Length = 15017 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgcctcgagaccgagtacg 392 |||||||||||||||||||| Sbjct: 8358 gcgcctcgagaccgagtacg 8377
>ref|NM_139793.1| Drosophila melanogaster CG8368-RA, transcript variant A (CG8368), mRNA Length = 2506 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagaagaaaaagaagc 212 |||||||||||||||||||| Sbjct: 157 cgagaagaagaaaaagaagc 176
>gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, complete sequence Length = 183494 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccgccaccgcctccggccgcggcg 257 ||||||||||||||||||| |||| Sbjct: 123943 ccgccaccgcctccggccgaggcg 123966
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gcgcaaggtcggctgcatcgagtc 348 |||||||||||||| ||||||||| Sbjct: 2518089 gcgcaaggtcggctccatcgagtc 2518112
>gb|AF440619.1|AF440619 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus section 1 of 2 Length = 350000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ctccctcgccggctccctcc 140 |||||||||||||||||||| Sbjct: 181016 ctccctcgccggctccctcc 181035
>dbj|AK156319.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830016G10 product:DRAPC1 (Adenomatosis polyposis coli down-regulated 1) (APCDD1 protein) homolog [Homo sapiens], full insert sequence Length = 2800 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 160 gggcgcgcgctccctcgccg 141
>dbj|AK172004.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830028H24 product:DRAPC1 (Adenomatosis polyposis coli down-regulated 1) (APCDD1 protein) homolog [Homo sapiens], full insert sequence Length = 3421 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gggcgcgcgctccctcgccg 131 |||||||||||||||||||| Sbjct: 163 gggcgcgcgctccctcgccg 144
>gb|AF279660.2|AF279660 Homo sapiens CAR (RFP2) gene, complete cds; DLEU2 and DLEU1 genes, complete sequence; and RPL18 and p48/Hip pseudogenes, complete sequence Length = 347503 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ctccctcgccggctccctcc 140 |||||||||||||||||||| Sbjct: 133308 ctccctcgccggctccctcc 133327
>gb|AC069475.27| Homo sapiens chromosome 13 clone 317g11 map 13q14, complete sequence Length = 153092 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ctccctcgccggctccctcc 140 |||||||||||||||||||| Sbjct: 81627 ctccctcgccggctccctcc 81646
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||||||||| ||||| ||||||||| Sbjct: 4261494 gccgccaccgccgccggcggcggcggcg 4261467
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gagaagaagaaaaagaagcc 213 |||||||||||||||||||| Sbjct: 28789870 gagaagaagaaaaagaagcc 28789889 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||| ||||| ||||||||||||||| Sbjct: 14231635 gccgccgccgccgccggccgcggcggcg 14231662
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccg 252 |||||||||||||||||||| Sbjct: 21670148 gccgccaccgcctccggccg 21670129
>gb|AF121905.1|AF121905 Rhodococcus sp. I24 aromatic compound bioconversion gene cluster, complete sequence Length = 11465 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgcctcgagaccgagtacg 392 |||||||||||||||||||| Sbjct: 5476 gcgcctcgagaccgagtacg 5495
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 4552 caccgcctccggcggcggcggcgt 4529
>gb|AY392424.3| Rhodococcus sp. P200 rubredoxin (rub1), putative naphthalene degradation regulator protein (narR1), putative naphthalene degradation regulator protein (narR2), hypothetical protein, naphthalene dioxygenase large subunit (narAa), naphthalene dioxygenase small subunit (narAb), cis-naphthalene dihydrodiol dehydrogenase (narB), and putative aldolase (narC) genes, complete cds Length = 8815 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgcctcgagaccgagtacg 392 |||||||||||||||||||| Sbjct: 4987 gcgcctcgagaccgagtacg 5006
>gb|AY392423.2| Rhodococcus sp. P400 rubredoxin (rub1), putative naphthalene degradation regulator protein (narR1), putative naphthalene degradation regulator protein (narR2), hypothetical protein, naphthalene dioxygenase large subunit (narAa), naphthalene dioxygenase small subunit (narAb), cis-naphthalene dihydrodiol dehydrogenase (narB), putative aldolase (narC), and putative oxygenase gene (oxiA) genes, complete cds Length = 12766 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgcctcgagaccgagtacg 392 |||||||||||||||||||| Sbjct: 4921 gcgcctcgagaccgagtacg 4940
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gagaagaagaaaaagaagcc 213 |||||||||||||||||||| Sbjct: 106443 gagaagaagaaaaagaagcc 106462
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccg 252 |||||||||||||||||||| Sbjct: 126701 gccgccaccgcctccggccg 126682
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccg 252 |||||||||||||||||||| Sbjct: 22199 gccgccaccgcctccggccg 22180
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgccgcctagggtttccacc 72 |||||||||||||||||||| Sbjct: 27260 cgccgcctagggtttccacc 27241
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgccgcctagggtttccacc 72 |||||||||||||||||||| Sbjct: 183582 cgccgcctagggtttccacc 183563
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgccgccaccgcctccggcc 251 |||||||||||||||||||| Sbjct: 126384 cgccgccaccgcctccggcc 126403
>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_E02 Length = 125860 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||| ||||| ||||||||||||||| Sbjct: 36785 gccgccgccgccgccggccgcggcggcg 36812
>dbj|AB073155.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC clone:F19O5 Length = 116597 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 98662 ccgagaagaagaaaaagaag 98643
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgccgccaccgcctccggcc 251 |||||||||||||||||||| Sbjct: 12274 cgccgccaccgcctccggcc 12293
>dbj|AB110633.1| Rhodococcus opacus plasmid pWK301 orf6, dodR1, dodR2, orf7, dodA, dodB, dodC,orf8, genes for rubredoxin, transcriptional regulater GntR family protein, transcriptional activator protein, 2,4-diacetylphloroglucinol biosynthetic protein, terminal dioxygenase large subunit, terminal dioxygenase small subunit, dihydrodiol dehydrogenase, hydratase-aldolase, complete cds Length = 9225 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgcctcgagaccgagtacg 392 |||||||||||||||||||| Sbjct: 6156 gcgcctcgagaccgagtacg 6175
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 159561 caccgcctccggcggcggcggcgt 159538
>dbj|AK109545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E05, full insert sequence Length = 3015 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccgagaagaagaaaaagaag 211 |||||||||||||||||||| Sbjct: 1127 ccgagaagaagaaaaagaag 1146
>dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D12, full insert sequence Length = 1874 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 537 caccgcctccggcggcggcggcgt 560
>dbj|AK100079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J23, full insert sequence Length = 2495 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cgccgcctagggtttccacc 72 |||||||||||||||||||| Sbjct: 96 cgccgcctagggtttccacc 115
>emb|AL450169.1|CNS07EEW Genomic sequence at the putative B_CLL involved tumor suppressor gene locus on human chromosome 13q14.3 clone PAC 4E7,BAC 93D9,PAC 63H3 of library LLNL from chromosome 13 of Homo sapiens (human) Length = 279647 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ctccctcgccggctccctcc 140 |||||||||||||||||||| Sbjct: 18470 ctccctcgccggctccctcc 18489
>dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G17, full insert sequence Length = 2524 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 1693 caccgcctccggcggcggcggcgt 1670
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccgccggcggcgatgacgcc 235 |||||||||||||||||||| Sbjct: 1943057 ccgccggcggcgatgacgcc 1943076
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccgccggcggcgatgacgcc 235 |||||||||||||||||||| Sbjct: 3450608 ccgccggcggcgatgacgcc 3450627
>dbj|AK067100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098O07, full insert sequence Length = 1829 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||| ||||| ||||||||||||||| Sbjct: 235 gccgccgccgccgccggccgcggcggcg 208
>gb|AC154661.2| Mus musculus BAC clone RP24-274N1 from 12, complete sequence Length = 159667 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gaagaagaaaaagaagccct 215 |||||||||||||||||||| Sbjct: 39252 gaagaagaaaaagaagccct 39271
>dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G04, full insert sequence Length = 1952 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 caccgcctccggccgcggcggcgt 261 ||||||||||||| |||||||||| Sbjct: 610 caccgcctccggcggcggcggcgt 633
>emb|CR942359.2| Xenopus tropicalis finished cDNA, clone TGas097l16 Length = 1410 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 agaagaagaaaaagaagccc 214 |||||||||||||||||||| Sbjct: 238 agaagaagaaaaagaagccc 257
>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete sequence Length = 255329 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagaagaaaaagaagc 212 |||||||||||||||||||| Sbjct: 211976 cgagaagaagaaaaagaagc 211995
>emb|CR926263.1| Xenopus tropicalis finished cDNA, clone TEgg099p06 Length = 946 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 agaagaagaaaaagaagccc 214 |||||||||||||||||||| Sbjct: 258 agaagaagaaaaagaagccc 277
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgccgccaccgcctccggcc 251 |||||||||||||||||||| Sbjct: 512873 cgccgccaccgcctccggcc 512892
>emb|CR936258.1| Natronomonas pharaonis DSM 2160 plasmid PL131 complete genome Length = 130989 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cggcgtggtcatgacggcgc 275 |||||||||||||||||||| Sbjct: 121836 cggcgtggtcatgacggcgc 121817
>gb|AC154344.1| Mus musculus BAC clone RP23-226G16 from 16, complete sequence Length = 171340 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gagaagaagaaaaagaagcc 213 |||||||||||||||||||| Sbjct: 106139 gagaagaagaaaaagaagcc 106120
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gccgccaccgcctccggccgcggcggcg 260 |||||||||||| ||||| ||||||||| Sbjct: 89994 gccgccaccgccgccggcggcggcggcg 89967
>gb|AC140297.3| Mus musculus BAC clone RP24-313L21 from chromosome 7, complete sequence Length = 156825 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 agggtttccaccccccgcccctcc 84 |||||||||||||||| ||||||| Sbjct: 108983 agggtttccaccccccacccctcc 109006
>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete sequence Length = 175570 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agaagaagaaaaagaagccc 214 |||||||||||||||||||| Sbjct: 50560 agaagaagaaaaagaagccc 50541 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,436,939 Number of Sequences: 3902068 Number of extensions: 3436939 Number of successful extensions: 127947 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124019 Number of HSP's gapped (non-prelim): 3928 length of query: 402 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 380 effective length of database: 17,147,199,772 effective search space: 6515935913360 effective search space used: 6515935913360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
