ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479398.1| Oryza sativa (japonica cultivar-group), mRNA 327 1e-86
2ref|XM_506533.1| PREDICTED Oryza sativa (japonica cultivar-group... 327 1e-86
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 327 1e-86
4dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 327 1e-86
5dbj|AK100911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 1e-86
6dbj|AK072927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 1e-86
7gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 50 0.005
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.019
9dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.019
10gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.30
11gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 44 0.30
12gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 44 0.30
13emb|AJ272115.2|TAR272115 Thauera aromatica ORF11, ORF1, ORF2, OR... 42 1.2
14emb|AJ512889.1|AVU512889 Anthyllis vulneraria subsp. reuteri int... 42 1.2
15gb|DQ349122.1| Burkholderia cenocepacia strain IST432 undecapren... 42 1.2
16gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.2
17gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.2
18ref|NM_210030.1| Eremothecium gossypii AEL184Wp (AEL184W), mRNA 42 1.2
19gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.2
20ref|NM_194927.1| Oryza sativa (japonica cultivar-group) unknown ... 40 4.7
21ref|XM_527999.1| PREDICTED: Pan troglodytes similar to centaurin... 40 4.7
22ref|NM_192276.1| Oryza sativa (japonica cultivar-group), predic... 40 4.7
23ref|XM_469310.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.7
24gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
25gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 4.7
26gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
27ref|XM_360007.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.7
28gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.7
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.7
30gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island ... 40 4.7
31ref|XM_983007.1| PREDICTED: Mus musculus coiled-coil domain cont... 40 4.7
32ref|XM_982969.1| PREDICTED: Mus musculus coiled-coil domain cont... 40 4.7
33ref|XM_983044.1| PREDICTED: Mus musculus coiled-coil domain cont... 40 4.7
34ref|XM_897687.2| PREDICTED: Mus musculus coiled-coil domain cont... 40 4.7
35ref|XM_897673.2| PREDICTED: Mus musculus coiled-coil domain cont... 40 4.7
36ref|XM_618775.3| PREDICTED: Mus musculus coiled-coil domain cont... 40 4.7
37gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, ... 40 4.7
38gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, comp... 40 4.7
39gb|AF218499.1| Anthyllis vulneraria internal transcribed spacer ... 40 4.7
40gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 40 4.7
41gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 4.7
42gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 40 4.7
43emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30 40 4.7
44emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.7
45emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 40 4.7
46emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.7
47gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
48emb|AJ512890.1|AVU512890 Anthyllis vulneraria internal transcrib... 40 4.7
49emb|AJ512888.1|AVU512888 Anthyllis vulneraria subsp. vulneraria ... 40 4.7
50emb|AJ512884.1|AVU512884 Anthyllis vulneraria subsp. weldeniana ... 40 4.7
51emb|AJ512883.1|AVU512883 Anthyllis vulneraria internal transcrib... 40 4.7
52gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 4.7
53gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene clust... 40 4.7
54gb|AC010973.6| Homo sapiens BAC clone RP11-148K1 from 7, complet... 40 4.7
55gb|AF142342.1|AF142342 Spodoptera litura antibacterial protein c... 40 4.7
56gb|AF142341.1|AF142341 Spodoptera litura antibacterial protein c... 40 4.7
57gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 4.7
58dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
59dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
60dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
61dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
63gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell ... 40 4.7
64dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
65dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
66dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
67dbj|AK120969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
68dbj|AK070930.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
69emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-4... 40 4.7
70dbj|AB111054.1| Oncorhynchus masou mRNA for c-Fos protein, compl... 40 4.7
71dbj|AB111053.1| Oncorhynchus nerka mRNA for c-Fos type1 protein,... 40 4.7
72gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 4.7
73gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.7
74gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.7
75gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
76gb|AF058302.1|AF058302 Streptomyces roseofulvus frenolicin biosy... 40 4.7
77gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, par... 40 4.7
78gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, compl... 40 4.7 
>ref|XM_479398.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3881

 Score =  327 bits (165), Expect = 1e-86
 Identities = 213/229 (93%)
 Strand = Plus / Plus

                                                                       
Query: 128 cggagatggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggagg 187
           ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 76  cggagatggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggagg 135

                                                                       
Query: 188 cgccctacatcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcag 247
           |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |
Sbjct: 136 cgccctacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcgg 195

                                                                       
Query: 248 ccaacatcgagatctccagcctcgacttccagtccgactcccccgacctgcccctcctcg 307
           ||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 196 ccaacatcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcg 255

                                                            
Query: 308 ccgcggcgccctcccccgaccgcttcaaccgcctctgctggtcccgccc 356
           || | || || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 256 cctccgccccttcccccgaccgcttcaaccgcctctcctggtcccgccc 304
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>ref|XM_506533.1| PREDICTED Oryza sativa (japonica cultivar-group), P0047B07.120 mRNA
          Length = 3906

 Score =  327 bits (165), Expect = 1e-86
 Identities = 213/229 (93%)
 Strand = Plus / Plus

                                                                       
Query: 128 cggagatggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggagg 187
           ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 138 cggagatggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggagg 197

                                                                       
Query: 188 cgccctacatcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcag 247
           |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |
Sbjct: 198 cgccctacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcgg 257

                                                                       
Query: 248 ccaacatcgagatctccagcctcgacttccagtccgactcccccgacctgcccctcctcg 307
           ||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 258 ccaacatcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcg 317

                                                            
Query: 308 ccgcggcgccctcccccgaccgcttcaaccgcctctgctggtcccgccc 356
           || | || || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 318 cctccgccccttcccccgaccgcttcaaccgcctctcctggtcccgccc 366
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  327 bits (165), Expect = 1e-86
 Identities = 213/229 (93%)
 Strand = Plus / Plus

                                                                            
Query: 128      cggagatggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggagg 187
                ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 27602593 cggagatggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggagg 27602652

                                                                            
Query: 188      cgccctacatcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcag 247
                |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |
Sbjct: 27602653 cgccctacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcgg 27602712

                                                                            
Query: 248      ccaacatcgagatctccagcctcgacttccagtccgactcccccgacctgcccctcctcg 307
                ||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 27602713 ccaacatcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcg 27602772

                                                                 
Query: 308      ccgcggcgccctcccccgaccgcttcaaccgcctctgctggtcccgccc 356
                || | || || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 27602773 cctccgccccttcccccgaccgcttcaaccgcctctcctggtcccgccc 27602821
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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score =  327 bits (165), Expect = 1e-86
 Identities = 213/229 (93%)
 Strand = Plus / Plus

                                                                         
Query: 128   cggagatggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggagg 187
             ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 59586 cggagatggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggagg 59645

                                                                         
Query: 188   cgccctacatcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcag 247
             |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |
Sbjct: 59646 cgccctacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcgg 59705

                                                                         
Query: 248   ccaacatcgagatctccagcctcgacttccagtccgactcccccgacctgcccctcctcg 307
             ||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 59706 ccaacatcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcg 59765

                                                              
Query: 308   ccgcggcgccctcccccgaccgcttcaaccgcctctgctggtcccgccc 356
             || | || || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 59766 cctccgccccttcccccgaccgcttcaaccgcctctcctggtcccgccc 59814
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>dbj|AK100911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132O04, full
           insert sequence
          Length = 3881

 Score =  327 bits (165), Expect = 1e-86
 Identities = 213/229 (93%)
 Strand = Plus / Plus

                                                                       
Query: 128 cggagatggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggagg 187
           ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 76  cggagatggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggagg 135

                                                                       
Query: 188 cgccctacatcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcag 247
           |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |
Sbjct: 136 cgccctacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcgg 195

                                                                       
Query: 248 ccaacatcgagatctccagcctcgacttccagtccgactcccccgacctgcccctcctcg 307
           ||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 196 ccaacatcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcg 255

                                                            
Query: 308 ccgcggcgccctcccccgaccgcttcaaccgcctctgctggtcccgccc 356
           || | || || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 256 cctccgccccttcccccgaccgcttcaaccgcctctcctggtcccgccc 304
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>dbj|AK072927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H22, full
           insert sequence
          Length = 3905

 Score =  327 bits (165), Expect = 1e-86
 Identities = 213/229 (93%)
 Strand = Plus / Plus

                                                                       
Query: 128 cggagatggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggagg 187
           ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 138 cggagatggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggagg 197

                                                                       
Query: 188 cgccctacatcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcag 247
           |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |
Sbjct: 198 cgccctacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcgg 257

                                                                       
Query: 248 ccaacatcgagatctccagcctcgacttccagtccgactcccccgacctgcccctcctcg 307
           ||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 258 ccaacatcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcg 317

                                                            
Query: 308 ccgcggcgccctcccccgaccgcttcaaccgcctctgctggtcccgccc 356
           || | || || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 318 cctccgccccttcccccgaccgcttcaaccgcctcttctggtcccgccc 366
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 168     gacggcgctcgcgccggaggcgccc 192
               |||||||||||||||||||||||||
Sbjct: 3262212 gacggcgctcgcgccggaggcgccc 3262188
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 298      cccctcctcgccgcggcgccctcc 321
                ||||||||||||||||||||||||
Sbjct: 12328049 cccctcctcgccgcggcgccctcc 12328072
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 298    cccctcctcgccgcggcgccctcc 321
              ||||||||||||||||||||||||
Sbjct: 111603 cccctcctcgccgcggcgccctcc 111626
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 156     gcgcgcggcgctgacggcgctc 177
               ||||||||||||||||||||||
Sbjct: 3108489 gcgcgcggcgctgacggcgctc 3108510
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 156     gcgcgcggcgctgacggcgctcgcgccgga 185
               ||||||| ||||||||||||||| ||||||
Sbjct: 1003867 gcgcgcgacgctgacggcgctcgggccgga 1003838
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 187     gcgccctacatcgccgccggca 208
               ||||||||||||||||||||||
Sbjct: 3637966 gcgccctacatcgccgccggca 3637987
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>emb|AJ272115.2|TAR272115 Thauera aromatica ORF11, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF12,
             ORF7, ORF8, ORF9, ORF10, ORF13, ORF14, ORF15
          Length = 16925

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   gcgcagcgcgcggcgctgacg 171
             |||||||||||||||||||||
Sbjct: 14092 gcgcagcgcgcggcgctgacg 14112
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>emb|AJ512889.1|AVU512889 Anthyllis vulneraria subsp. reuteri internal transcribed spacer 1
           (ITS1)
          Length = 228

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 gacggcgctcgcgccggaggcgcc 191
           |||||||||||||||||||| |||
Sbjct: 190 gacggcgctcgcgccggaggngcc 213
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>gb|DQ349122.1| Burkholderia cenocepacia strain IST432 undecaprenyl-phosphate
           glucosyl-1-phosphate transferase precursor (bceB) gene,
           promoter region and complete cds
          Length = 1461

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 160 gcggcgctgacggcgctcgcgccgg 184
           |||||||| ||||||||||||||||
Sbjct: 913 gcggcgctcacggcgctcgcgccgg 937
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 148    agcgcgcagcgcgcggcgctgacgg 172
              ||||||||||||||| |||||||||
Sbjct: 293392 agcgcgcagcgcgcgacgctgacgg 293416
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 161     cggcgctgacggcgctcgcgc 181
               |||||||||||||||||||||
Sbjct: 4640956 cggcgctgacggcgctcgcgc 4640936



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     ggcgctcgcgccggaggcgc 190
               ||||||||||||||||||||
Sbjct: 4833751 ggcgctcgcgccggaggcgc 4833732
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>ref|NM_210030.1| Eremothecium gossypii AEL184Wp (AEL184W), mRNA
          Length = 885

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 148 agcgcgcagcgcgcggcgctgacgg 172
           ||||||||||||||| |||||||||
Sbjct: 514 agcgcgcagcgcgcgacgctgacgg 538
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 156     gcgcgcggcgctgacggcgctcgcg 180
               ||||||||||||| |||||||||||
Sbjct: 2736420 gcgcgcggcgctgccggcgctcgcg 2736396
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>ref|NM_194927.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNAa0034B05.12), mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 gcggcggtcgccggagatgg 136
           ||||||||||||||||||||
Sbjct: 474 gcggcggtcgccggagatgg 455
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>ref|XM_527999.1| PREDICTED: Pan troglodytes similar to centaurin, gamma 3; spidin;
           MR1-interacting protein (LOC472625), mRNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 ctcgccgcggcgccctcccccgac 327
           ||||||||||||||||| ||||||
Sbjct: 598 ctcgccgcggcgccctctcccgac 621
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>ref|NM_192276.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1542

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 ccctcctcgccgcggcgccc 318
           ||||||||||||||||||||
Sbjct: 242 ccctcctcgccgcggcgccc 261
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>ref|XM_469310.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  cccctcctcgccgcggcgcc 317
            ||||||||||||||||||||
Sbjct: 1562 cccctcctcgccgcggcgcc 1543
to top
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05,
              complete sequence
          Length = 178013

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    ggcggtcgccggagatggcgtgca 142
              |||||||||||| |||||||||||
Sbjct: 134080 ggcggtcgccggtgatggcgtgca 134057
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     gcggcgctgacggcgctcgc 179
               ||||||||||||||||||||
Sbjct: 2024904 gcggcgctgacggcgctcgc 2024923
to top
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0004E08, complete sequence
          Length = 158294

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   gcggcggtcgccggagatgg 136
             ||||||||||||||||||||
Sbjct: 38667 gcggcggtcgccggagatgg 38648
to top
>ref|XM_360007.1| Magnaporthe grisea 70-15 hypothetical protein (MG05382.4) partial
            mRNA
          Length = 5088

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  ccgcttcaaccgcctctgct 346
            ||||||||||||||||||||
Sbjct: 2894 ccgcttcaaccgcctctgct 2913
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 158     gcgcggcgctgacggcgctcgcgc 181
               |||||||||||| |||||||||||
Sbjct: 1548633 gcgcggcgctgaaggcgctcgcgc 1548610



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    cgcggcgctgacggcgctcg 178
              ||||||||||||||||||||
Sbjct: 409549 cgcggcgctgacggcgctcg 409530
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 298      cccctcctcgccgcggcgcc 317
                ||||||||||||||||||||
Sbjct: 26852695 cccctcctcgccgcggcgcc 26852714
to top
>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete
             sequence
          Length = 111332

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   ctacatcgccgccggcacca 211
             ||||||||||||||||||||
Sbjct: 72302 ctacatcgccgccggcacca 72283
to top
>ref|XM_983007.1| PREDICTED: Mus musculus coiled-coil domain containing 6,
          transcript variant 3 (Ccdc6), mRNA
          Length = 1760

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 agagcgcggcgcgggcgggc 98
          ||||||||||||||||||||
Sbjct: 54 agagcgcggcgcgggcgggc 35
to top
>ref|XM_982969.1| PREDICTED: Mus musculus coiled-coil domain containing 6,
          transcript variant 2 (Ccdc6), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 agagcgcggcgcgggcgggc 98
          ||||||||||||||||||||
Sbjct: 54 agagcgcggcgcgggcgggc 35
to top
>ref|XM_983044.1| PREDICTED: Mus musculus coiled-coil domain containing 6,
          transcript variant 4 (Ccdc6), mRNA
          Length = 5510

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 agagcgcggcgcgggcgggc 98
          ||||||||||||||||||||
Sbjct: 54 agagcgcggcgcgggcgggc 35
to top
>ref|XM_897687.2| PREDICTED: Mus musculus coiled-coil domain containing 6,
          transcript variant 4 (Ccdc6), mRNA
          Length = 1760

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 agagcgcggcgcgggcgggc 98
          ||||||||||||||||||||
Sbjct: 54 agagcgcggcgcgggcgggc 35
to top
>ref|XM_897673.2| PREDICTED: Mus musculus coiled-coil domain containing 6,
          transcript variant 3 (Ccdc6), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 agagcgcggcgcgggcgggc 98
          ||||||||||||||||||||
Sbjct: 54 agagcgcggcgcgggcgggc 35
to top
>ref|XM_618775.3| PREDICTED: Mus musculus coiled-coil domain containing 6,
          transcript variant 1 (Ccdc6), mRNA
          Length = 5511

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 agagcgcggcgcgggcgggc 98
          ||||||||||||||||||||
Sbjct: 54 agagcgcggcgcgggcgggc 35
to top
>gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, complete sequence
          Length = 103532

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ctacatcgccgccggcacca 211
             ||||||||||||||||||||
Sbjct: 39794 ctacatcgccgccggcacca 39813
to top
>gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence
          Length = 233720

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   gatggcgtgcatcaagagcg 151
             ||||||||||||||||||||
Sbjct: 91961 gatggcgtgcatcaagagcg 91980
to top
>gb|AF218499.1| Anthyllis vulneraria internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 607

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gacggcgctcgcgccggagg 187
           ||||||||||||||||||||
Sbjct: 190 gacggcgctcgcgccggagg 209
to top
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    gcagcgcgcggcgctgacgg 172
              ||||||||||||||||||||
Sbjct: 523981 gcagcgcgcggcgctgacgg 524000
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    catcgccgccggcaccatga 214
              ||||||||||||||||||||
Sbjct: 121064 catcgccgccggcaccatga 121045
to top
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   cccctcctcgccgcggcgcc 317
             ||||||||||||||||||||
Sbjct: 31695 cccctcctcgccgcggcgcc 31714
to top
>emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30
          Length = 233755

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   gatggcgtgcatcaagagcg 151
             ||||||||||||||||||||
Sbjct: 27856 gatggcgtgcatcaagagcg 27837
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    cggcaccatgagcggcgccg 223
              ||||||||||||||||||||
Sbjct: 294677 cggcaccatgagcggcgccg 294658
to top
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   cggcaccatgagcggcgccg 223
             ||||||||||||||||||||
Sbjct: 59407 cggcaccatgagcggcgccg 59388
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 158     gcgcggcgctgacggcgctcgcgc 181
               |||||||||||| |||||||||||
Sbjct: 2883378 gcgcggcgctgaaggcgctcgcgc 2883355



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 159     cgcggcgctgacggcgctcg 178
               ||||||||||||||||||||
Sbjct: 1728995 cgcggcgctgacggcgctcg 1728976
to top
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05,
              complete sequence
          Length = 125655

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    gcggcggtcgccggagatgg 136
              ||||||||||||||||||||
Sbjct: 104322 gcggcggtcgccggagatgg 104303
to top
>emb|AJ512890.1|AVU512890 Anthyllis vulneraria internal transcribed spacer 1 (ITS1), from
           Romania
          Length = 228

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gacggcgctcgcgccggagg 187
           ||||||||||||||||||||
Sbjct: 190 gacggcgctcgcgccggagg 209
to top
>emb|AJ512888.1|AVU512888 Anthyllis vulneraria subsp. vulneraria internal transcribed spacer
           1 (ITS1)
          Length = 228

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gacggcgctcgcgccggagg 187
           ||||||||||||||||||||
Sbjct: 190 gacggcgctcgcgccggagg 209
to top
>emb|AJ512884.1|AVU512884 Anthyllis vulneraria subsp. weldeniana internal transcribed spacer
           1 (ITS1), from Monte Bove
          Length = 228

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gacggcgctcgcgccggagg 187
           ||||||||||||||||||||
Sbjct: 190 gacggcgctcgcgccggagg 209
to top
>emb|AJ512883.1|AVU512883 Anthyllis vulneraria internal transcribed spacer 1 (ITS1), from
           Sweden
          Length = 228

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gacggcgctcgcgccggagg 187
           ||||||||||||||||||||
Sbjct: 190 gacggcgctcgcgccggagg 209
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 68     gtcctgcggcgagagcgcggcgcgggcg 95
              |||||||| ||||||| |||||||||||
Sbjct: 288746 gtcctgcgccgagagctcggcgcgggcg 288719
to top
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence
          Length = 66280

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gcggcgctgacggcgctcgc 179
             ||||||||||||||||||||
Sbjct: 21347 gcggcgctgacggcgctcgc 21328
to top
>gb|AC010973.6| Homo sapiens BAC clone RP11-148K1 from 7, complete sequence
          Length = 222605

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    ctcgccgcggcgccctcccccgac 327
              ||||||||||||||||| ||||||
Sbjct: 118166 ctcgccgcggcgccctctcccgac 118143
to top
>gb|AF142342.1|AF142342 Spodoptera litura antibacterial protein cecropin B (cecB) mRNA,
           partial cds
          Length = 469

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 158 gcgcggcgctgacggcgctc 177
           ||||||||||||||||||||
Sbjct: 55  gcgcggcgctgacggcgctc 36
to top
>gb|AF142341.1|AF142341 Spodoptera litura antibacterial protein cecropin A (cecA) mRNA,
           partial cds
          Length = 391

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 158 gcgcggcgctgacggcgctc 177
           ||||||||||||||||||||
Sbjct: 55  gcgcggcgctgacggcgctc 36
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 159     cgcggcgctgacggcgctcg 178
               ||||||||||||||||||||
Sbjct: 1054921 cgcggcgctgacggcgctcg 1054940



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    gcgcggcgctgacggcgctcgcgc 181
              |||||||||||| |||||||||||
Sbjct: 354791 gcgcggcgctgaaggcgctcgcgc 354814
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     gcggcggtcgccggagatgg 136
               ||||||||||||||||||||
Sbjct: 3447538 gcggcggtcgccggagatgg 3447519
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 299      ccctcctcgccgcggcgccctccc 322
                ||||||||||||| ||||||||||
Sbjct: 13149098 ccctcctcgccgccgcgccctccc 13149075
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 119      ggcggtcgccggagatggcgtgca 142
                |||||||||||| |||||||||||
Sbjct: 18660965 ggcggtcgccggtgatggcgtgca 18660942
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 298      cccctcctcgccgcggcgcc 317
                ||||||||||||||||||||
Sbjct: 26944018 cccctcctcgccgcggcgcc 26944037
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      ccctcctcgccgcggcgccc 318
                ||||||||||||||||||||
Sbjct: 25782651 ccctcctcgccgcggcgccc 25782670
to top
>gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 201467

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gcctccatccagtccagatc 33
             ||||||||||||||||||||
Sbjct: 93934 gcctccatccagtccagatc 93915
to top
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510C12
          Length = 177049

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ccctcctcgccgcggcgccc 318
             ||||||||||||||||||||
Sbjct: 22575 ccctcctcgccgcggcgccc 22594
to top
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ccctcctcgccgcggcgccc 318
             ||||||||||||||||||||
Sbjct: 85115 ccctcctcgccgcggcgccc 85134
to top
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0012F14
          Length = 168629

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 299   ccctcctcgccgcggcgccctccc 322
             ||||||||||||| ||||||||||
Sbjct: 66286 ccctcctcgccgccgcgccctccc 66263
to top
>dbj|AK120969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040M24, full
           insert sequence
          Length = 1702

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 299 ccctcctcgccgcggcgccctccc 322
           ||||||||||||| ||||||||||
Sbjct: 276 ccctcctcgccgccgcgccctccc 299
to top
>dbj|AK070930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074M13, full
           insert sequence
          Length = 1311

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 gcggcggtcgccggagatgg 136
           ||||||||||||||||||||
Sbjct: 528 gcggcggtcgccggagatgg 509
to top
>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194815

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 283   gactcccccgacctgccc-ctcctcgcc 309
             |||||||||||||||||| |||||||||
Sbjct: 30063 gactcccccgacctgccctctcctcgcc 30036
to top
>dbj|AB111054.1| Oncorhynchus masou mRNA for c-Fos protein, complete cds
          Length = 1864

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  cctcgcctccatccagtcca 29
           ||||||||||||||||||||
Sbjct: 791 cctcgcctccatccagtcca 810
to top
>dbj|AB111053.1| Oncorhynchus nerka mRNA for c-Fos type1 protein, complete cds
          Length = 1815

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  cctcgcctccatccagtcca 29
           ||||||||||||||||||||
Sbjct: 721 cctcgcctccatccagtcca 740
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     cgcgcagcgcgcggcgctga 169
               ||||||||||||||||||||
Sbjct: 1954564 cgcgcagcgcgcggcgctga 1954545



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     gcgcgcagcgcgcggcgctg 168
               ||||||||||||||||||||
Sbjct: 1637129 gcgcgcagcgcgcggcgctg 1637110
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     gcgcagcgcgcggcgctgac 170
               ||||||||||||||||||||
Sbjct: 4374371 gcgcagcgcgcggcgctgac 4374352
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 189     gccctacatcgccgccggca 208
               ||||||||||||||||||||
Sbjct: 3802689 gccctacatcgccgccggca 3802670
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     gcggcggtcgccggagatgg 136
               ||||||||||||||||||||
Sbjct: 3447459 gcggcggtcgccggagatgg 3447440
to top
>gb|AF058302.1|AF058302 Streptomyces roseofulvus frenolicin biosynthetic gene cluster,
            complete sequence
          Length = 25306

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 64   ccctgtcctgcggcgagagcgcgg 87
            ||||||||||||||| ||||||||
Sbjct: 3111 ccctgtcctgcggcgcgagcgcgg 3088
to top
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome
          Length = 189370

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gcgcgcggcgctgacggcgc 175
             ||||||||||||||||||||
Sbjct: 78097 gcgcgcggcgctgacggcgc 78078
to top
>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     agagcgcggcgcgggcgggc 98
              ||||||||||||||||||||
Sbjct: 108151 agagcgcggcgcgggcgggc 108170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,281,094
Number of Sequences: 3902068
Number of extensions: 2281094
Number of successful extensions: 59580
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56118
Number of HSP's gapped (non-prelim): 3463
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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