ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 83.8 bits (42), Expect = 2e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 157 gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcgg 206 ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 20501 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcgg 20550
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 83.8 bits (42), Expect = 2e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 157 gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcgg 206 ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 130028 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcgg 130077
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 83.8 bits (42), Expect = 2e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 157 gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcgg 206 ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 3142784 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcgg 3142833 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 12806357 tcccctctcctctctctcccc 12806377 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 9768260 tcccctctcctctctctccc 9768241 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 9760955 tcccctctcctctctctccc 9760936 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 9753651 tcccctctcctctctctccc 9753632
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctcccc 37 ||||||||||||||||||||||| Sbjct: 9822473 cttcccctctcctctctctcccc 9822451 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 20666212 cttcccctctcctctctctc 20666193
>gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome 10, complete sequence Length = 182371 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccccc 39 ||||||||||||||||||||||| Sbjct: 36044 tcccctctcctctctctcccccc 36066
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctcccc 37 ||||||||||||||||||||||| Sbjct: 94892 cttcccctctcctctctctcccc 94870
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctcccc 37 ||||||||||||||||||||||| Sbjct: 5160 cttcccctctcctctctctcccc 5138
>gb|AC112790.5| Mus musculus BAC clone RP23-160A1 from 10, complete sequence Length = 211714 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccccc 39 ||||||||||||||||||||||| Sbjct: 148930 tcccctctcctctctctcccccc 148952
>ref|XM_464409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 cgcagcgcctcgccggcggcgg 206 |||||||||||||||||||||| Sbjct: 125 cgcagcgcctcgccggcggcgg 104
>gb|AC138334.11| Mus musculus chromosome 7, clone RP23-306H5, complete sequence Length = 177803 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctccc 36 |||||||||||||||||||||| Sbjct: 126918 cttcccctctcctctctctccc 126897
>gb|AC113444.9| Mus musculus chromosome 15, clone RP23-268C9, complete sequence Length = 189539 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 ccagcttcccctctcctctctctccc 36 |||||||| ||||||||||||||||| Sbjct: 46358 ccagcttctcctctcctctctctccc 46383
>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence Length = 190516 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 cccctctcctctctctcccccc 39 |||||||||||||||||||||| Sbjct: 113995 cccctctcctctctctcccccc 114016
>gb|DQ483363.1| Gymnogyps californianus clone 66H microsatellite sequence Length = 723 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 cagcttcccctctcctctctctcccc 37 ||||||||||||| |||||||||||| Sbjct: 720 cagcttcccctcttctctctctcccc 695
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 gcttcccctctcctctctctcc 35 |||||||||||||||||||||| Sbjct: 33527 gcttcccctctcctctctctcc 33548
>gb|AC125372.4| Mus musculus BAC clone RP24-505G5 from chromosome 7, complete sequence Length = 131080 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 gcttcccctctcctctctctcc 35 |||||||||||||||||||||| Sbjct: 40550 gcttcccctctcctctctctcc 40571
>emb|AL122017.17|HSJ300G12 Human DNA sequence from clone RP1-300G12 on chromosome 6q13-14 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 79353 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccccc 38 |||||||||||||||||||||| Sbjct: 38536 tcccctctcctctctctccccc 38515
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctcccccca 40 ||||| |||||||||||||||||||| Sbjct: 74643 cttcctctctcctctctctcccccca 74618
>gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosome 7, complete sequence Length = 178072 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 gcttcccctctcctctctctcc 35 |||||||||||||||||||||| Sbjct: 756 gcttcccctctcctctctctcc 735
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 cgcagcgcctcgccggcggcgg 206 |||||||||||||||||||||| Sbjct: 5030255 cgcagcgcctcgccggcggcgg 5030276 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 26031044 cttcccctctcctctctctc 26031025 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gatcgccgcgccgacgcggg 127 |||||||||||||||||||| Sbjct: 1932749 gatcgccgcgccgacgcggg 1932730
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 cgcagcgcctcgccggcggcgg 206 |||||||||||||||||||||| Sbjct: 101381 cgcagcgcctcgccggcggcgg 101402
>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence Length = 217353 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 gcttcccctctcctctctctcc 35 |||||||||||||||||||||| Sbjct: 191153 gcttcccctctcctctctctcc 191174
>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence Length = 201791 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ccctctcctctctctcccccc 39 ||||||||||||||||||||| Sbjct: 108002 ccctctcctctctctcccccc 107982
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 22314 tcccctctcctctctctcccc 22334
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 122937 tcccctctcctctctctcccc 122917
>gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosome 8, complete sequence Length = 182604 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctcccccc 39 ||||||||||||||||||||| Sbjct: 160347 ccctctcctctctctcccccc 160367
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 115575 cgccgcagcggaggtcgcagc 115595
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 103816 tcccctctcctctctctcccc 103836
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 15927480 tcccctctcctctctctcccc 15927500
>gb|AC167141.2| Mus musculus BAC clone RP23-313L4 from chromosome 16, complete sequence Length = 192972 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 168938 tcccctctcctctctctcccc 168918 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 168922 tcccctctcctctctctcccc 168902 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 168906 tcccctctcctctctctcccc 168886 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 168890 tcccctctcctctctctcccc 168870 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 168867 tcccctctcctctctctcccc 168847
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 143819 tcccctctcctctctctcccc 143839
>gb|AC098721.3| Mus musculus BAC clone RP23-2O23 from 2, complete sequence Length = 219368 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 111241 tcccctctcctctctctcccc 111221
>gb|AC099930.11| Mus musculus chromosome 7, clone RP23-17C12, complete sequence Length = 224617 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ccctctcctctctctcccccc 39 ||||||||||||||||||||| Sbjct: 43782 ccctctcctctctctcccccc 43762
>ref|NM_010450.1| Mus musculus homeo box A11 (Hoxa11), mRNA Length = 2246 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 588 cgccgcagcggaggtcgcagc 568
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 tcgaccccgccggatcgccgc 116 ||||||||||||||||||||| Sbjct: 73729 tcgaccccgccggatcgccgc 73709
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cgcagcgcctcgccggcggcg 205 ||||||||||||||||||||| Sbjct: 138951 cgcagcgcctcgccggcggcg 138971
>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence Length = 169187 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 39895 cgccgcagcggaggtcgcagc 39915
>gb|AC009319.19| Homo sapiens 3 BAC RP11-297K7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172581 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcc 35 ||||||||||||||||||||| Sbjct: 90662 cttcccctctcctctctctcc 90682
>dbj|AK133481.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031409E18 product:homeo box A11, full insert sequence Length = 2286 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 631 cgccgcagcggaggtcgcagc 611
>emb|BX936296.17| Mouse DNA sequence from clone RP23-27J1 on chromosome 2, complete sequence Length = 188273 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 90626 tcccctctcctctctctcccc 90646
>gb|AC132878.13| Mus musculus chromosome 15, clone RP24-223D21, complete sequence Length = 145479 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcccccc 39 |||| |||||||||||||||||||| Sbjct: 77366 cttctcctctcctctctctcccccc 77390
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 15922014 tcccctctcctctctctcccc 15922034
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcccccc 39 |||||||||||||||| |||||||| Sbjct: 22502860 cttcccctctcctctccctcccccc 22502884
>gb|AC154801.2| Mus musculus BAC clone RP24-500P8 from chromosome 16, complete sequence Length = 157077 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 6822 tcccctctcctctctctcccc 6802 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 6806 tcccctctcctctctctcccc 6786 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 6790 tcccctctcctctctctcccc 6770 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 6774 tcccctctcctctctctcccc 6754 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 6751 tcccctctcctctctctcccc 6731
>ref|XM_575479.1| PREDICTED: Rattus norvegicus similar to homeobox protein (LOC500127), mRNA Length = 2275 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 609 cgccgcagcggaggtcgcagc 589
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcccccc 39 |||||||||||||||| |||||||| Sbjct: 18597 cttcccctctcctctccctcccccc 18621
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcccccc 39 |||||||||||||||| |||||||| Sbjct: 126998 cttcccctctcctctccctcccccc 127022
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 68186 cgccgcagcggaggtcgcagc 68166
>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence Length = 140384 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 26526 tcccctctcctctctctcccc 26506 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 26214 tcccctctcctctctctcccc 26194
>gb|BC052232.1| Mus musculus cDNA clone IMAGE:6504963 Length = 2307 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 609 cgccgcagcggaggtcgcagc 589
>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence Length = 241046 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 cccctctcctctctctccccc 38 ||||||||||||||||||||| Sbjct: 50275 cccctctcctctctctccccc 50255
>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence Length = 179732 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 98081 tcccctctcctctctctcccc 98061
>emb|AL158800.6|CNS01RGM Human chromosome 14 DNA sequence BAC R-359N5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163979 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcc 35 ||||||||||||||||||||| Sbjct: 136219 cttcccctctcctctctctcc 136239
>gb|U20371.1|MMU20371 Mus musculus homeobox protein (Hoxa11) gene, complete cds Length = 9038 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 5247 cgccgcagcggaggtcgcagc 5227
>gb|U20370.1|MMU20370 Mus musculus homeobox protein (Hoxa11) mRNA, complete cds Length = 2243 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 587 cgccgcagcggaggtcgcagc 567
>gb|U20367.1|MMU20367 Mus musculus Hoxa11 locus antisense-3C mRNA Length = 1434 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgccgcagcggaggtcgcagc 190 ||||||||||||||||||||| Sbjct: 99 cgccgcagcggaggtcgcagc 119
>gb|AC153958.2| Mus musculus 10 BAC RP24-541B4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176618 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccc 37 ||||||||||||||||||||| Sbjct: 114795 tcccctctcctctctctcccc 114775
>gb|AC168046.7| Mus musculus chromosome 8, clone RP24-335A7, complete sequence Length = 160659 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ccctctcctctctctcccccc 39 ||||||||||||||||||||| Sbjct: 15880 ccctctcctctctctcccccc 15860
>emb|AL626786.11| Mouse DNA sequence from clone RP23-269L6 on chromosome X, complete sequence Length = 156879 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctcccccc 39 ||||||||||||||||||||| Sbjct: 111208 ccctctcctctctctcccccc 111228
>emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chromosome 4, complete sequence Length = 93508 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctcc 35 ||||||||||||||||||||| Sbjct: 66012 cttcccctctcctctctctcc 66032
>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence Length = 201694 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcc 35 |||||||||||||||||||| Sbjct: 134846 ttcccctctcctctctctcc 134827
>gb|AC168882.3| Mus musculus BAC clone RP23-80D1 from chromosome 9, complete sequence Length = 210475 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cccctctcctctctctcccc 37 |||||||||||||||||||| Sbjct: 142390 cccctctcctctctctcccc 142409
>ref|XM_464052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2250 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gatcgccgcgccgacgcggg 127 |||||||||||||||||||| Sbjct: 466 gatcgccgcgccgacgcggg 485
>gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 178914 tcccctctcctctctctccc 178933
>gb|AF002993.1|HSAF002993 Homo sapiens cosmid from 7q22, complete sequence Length = 34921 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 184 ccctctcctctctctccccc 203
>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence Length = 157478 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 97541 tcccctctcctctctctccc 97522
>gb|AC132484.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0038E22, complete sequence Length = 150766 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 131352 tcccctctcctctctctccc 131333 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 124047 tcccctctcctctctctccc 124028 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 116743 tcccctctcctctctctccc 116724
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgccggatcgccgcgccgac 122 |||||||||||||||||||| Sbjct: 3176283 cgccggatcgccgcgccgac 3176302
>gb|AY513239.1| Homo sapiens complement component 3 (C3) gene, complete cds Length = 46393 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccccccgcagatctgggac 95 |||||||||||||||||||| Sbjct: 14711 gccccccgcagatctgggac 14730
>gb|AC123945.4| Mus musculus BAC clone RP24-87G13 from chromosome 14, complete sequence Length = 207945 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctccccc 38 |||| ||||||||||||||||||| Sbjct: 111644 cttctcctctcctctctctccccc 111621
>gb|AC130544.3| Mus musculus BAC clone RP24-209I17 from chromosome 19, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 85724 cttcccctctcctctctctc 85705
>gb|AC132242.2| Mus musculus BAC clone RP24-413O2 from chromosome 18, complete sequence Length = 177442 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcc 35 |||||||||||||||||||| Sbjct: 36219 ttcccctctcctctctctcc 36200
>gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosome 5, complete sequence Length = 209091 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 103504 tcccctctcctctctctccc 103523
>gb|AC122500.5| Mus musculus BAC clone RP24-409J4 from chromosome 8, complete sequence Length = 175361 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctccccc 38 ||||||||| |||||||||||||| Sbjct: 47787 cttcccctcccctctctctccccc 47810
>gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosome 15, complete sequence Length = 193321 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 59681 tcccctctcctctctctccc 59700
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence Length = 213701 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctccccc 38 |||||||| ||||||||||||||| Sbjct: 210115 cttcccctgtcctctctctccccc 210092
>gb|AC114005.5| Mus musculus BAC clone RP23-179L18 from 8, complete sequence Length = 214732 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccccca 40 |||||||||||||||||| ||||| Sbjct: 97761 tcccctctcctctctctctcccca 97738
>gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complete sequence Length = 210519 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctccccc 38 |||||||| ||||||||||||||| Sbjct: 167029 cttcccctgtcctctctctccccc 167052
>gb|AC117249.3| Mus musculus BAC clone RP24-347M10 from 8, complete sequence Length = 177116 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 69068 ccctctcctctctctccccc 69087
>gb|AC139214.12| Mus musculus chromosome 17, clone RP23-345D6, complete sequence Length = 286283 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 169810 cttcccctctcctctctctc 169791
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ctctcctctctctcccccca 40 |||||||||||||||||||| Sbjct: 73253 ctctcctctctctcccccca 73272
>emb|AL138894.11| Human DNA sequence from clone RP11-28O4 on chromosome 9 Contains the 5' end of the DBCCR1 gene for deleted in bladder cancer chromosome region candidate 1 (IB3089A) and a CpG island, complete sequence Length = 152366 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 83856 cttcccctctcctctctctc 83837
>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence Length = 275852 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 57841 cttcccctctcctctctctc 57822
>emb|AL008634.1|HS396D17 Human DNA sequence from clone RP3-396D17 on chromosome 1p33-35.3 Contains EST, STS, GSS, complete sequence Length = 152592 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 46383 cttcccctctcctctctctc 46364
>gb|AC129263.6| Rattus norvegicus 2 BAC CH230-258E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 194958 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 115488 ccctctcctctctctccccc 115469
>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete sequence Length = 116580 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ctctcctctctctcccccca 40 |||||||||||||||||||| Sbjct: 47040 ctctcctctctctcccccca 47059
>emb|Y15484.1|CFY15484 Canis familiaris gene encoding retinal guanylate cyclase E Length = 14515 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 3993 cttcccctctcctctctctc 3974 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 3871 cttcccctctcctctctctc 3852 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 3794 cttcccctctcctctctctc 3775
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgccggatcgccgcgccgac 122 |||||||||||||||||||| Sbjct: 1353745 cgccggatcgccgcgccgac 1353764
>emb|AL606466.12| Mouse DNA sequence from clone RP23-348N2 on chromosome 11 Contains the 5' end of the Ppp3r1 gene for protein phospatase 3 regulatory subunit B alpha isoform (calcineurin B, type I), a ribosomal protein L39 (Rpl39) pseudogene, a novel gene, the Plek gene for pleckstrin, a CUB domain and EGF-like repeat containing (Cegf) protein pseudogene and a CpG island, complete sequence Length = 201805 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 144462 tcccctctcctctctctccc 144443
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cgcagcgcctcgccggcggc 204 |||||||||||||||||||| Sbjct: 11079 cgcagcgcctcgccggcggc 11060
>gb|AC152392.6| Mus musculus chromosome 1, clone RP23-300P10, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 70786 cttcccctctcctctctctc 70805
>emb|AL645702.14| Mouse DNA sequence from clone RP23-163J17 on chromosome 1 Contains a ribosomal protein S2 (Rps2) pseudogene, a tigger transposable element derived 1 (TIGD1) pseudogene and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 205103 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctctcctctctctcccccca 40 |||||||||||||||||||| Sbjct: 115375 ctctcctctctctcccccca 115356
>gb|AE005854.1| Caulobacter crescentus CB15 section 180 of 359 of the complete genome Length = 11094 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cagcgcctcgccggcggcgg 206 |||||||||||||||||||| Sbjct: 622 cagcgcctcgccggcggcgg 641
>gb|AE011799.1| Xanthomonas axonopodis pv. citri str. 306, section 177 of 469 of the complete genome Length = 12995 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 cgaccccgccggatcgccgcgccg 120 ||||||||| |||||||||||||| Sbjct: 4848 cgaccccgcaggatcgccgcgccg 4825
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cagcgcctcgccggcggcgg 206 |||||||||||||||||||| Sbjct: 2814279 cagcgcctcgccggcggcgg 2814260
>gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, complete sequence Length = 172358 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 125582 ccctctcctctctctccccc 125601
>gb|AC021078.5| Homo sapiens chromosome 5 clone CTB-89H12, complete sequence Length = 145050 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctccccccaatt 43 ||||||| | |||||||||||||||||| Sbjct: 57048 ttcccctattctctctctccccccaatt 57021
>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence Length = 194368 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 193423 tcccctctcctctctctccc 193442
>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence Length = 210038 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cccctctcctctctctcccc 37 |||||||||||||||||||| Sbjct: 107514 cccctctcctctctctcccc 107533
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgccggatcgccgcgccgac 122 |||||||||||||||||||| Sbjct: 1279328 cgccggatcgccgcgccgac 1279309
>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete sequence Length = 144474 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 107345 tcccctctcctctctctccc 107364
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcccccc 39 ||||||||||||||||||| |||| Sbjct: 19802445 ttcccctctcctctctctctcccc 19802422
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcc 35 |||||||||||||||||||| Sbjct: 5265123 ttcccctctcctctctctcc 5265104
>gb|AF312032.1|AF312032 Homo sapiens acetylcholinesterase (ACHE) gene, partial cds; ASR2 (ASR2) gene, complete cds, alternatively spliced; thyroid receptor interacting protein 6 (TRIP6) gene, complete cds; cation-chloride cotransporter (CIP1) gene, complete cds, alternatively spliced; ephrin type-B receptor 4 precursor (EPHB4) and zonadhesin (ZAN) genes, complete cds; and unknown gene Length = 117962 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 7869 ccctctcctctctctccccc 7850
>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence Length = 185321 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ctctcctctctctcccccca 40 |||||||||||||||||||| Sbjct: 30919 ctctcctctctctcccccca 30938
>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92909 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 58815 ccctctcctctctctccccc 58834
>gb|AC074344.5| Homo sapiens BAC clone RP11-138A23 from 4, complete sequence Length = 160185 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cccagccagcttcccctctc 25 |||||||||||||||||||| Sbjct: 118891 cccagccagcttcccctctc 118872
>gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, complete sequence Length = 200167 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccccccgcagatctgggac 95 |||||||||||||||||||| Sbjct: 143626 gccccccgcagatctgggac 143607
>gb|AF237614.1|AF237614 Homo sapiens clone ACHE 'B' hypothetical protein gene, partial cds Length = 2552 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ccctctcctctctctccccc 38 |||||||||||||||||||| Sbjct: 2185 ccctctcctctctctccccc 2204
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcagcgcctcgccggcggcg 205 |||||||||||||||||||| Sbjct: 1128087 gcagcgcctcgccggcggcg 1128106
>gb|AE004486.1| Pseudomonas aeruginosa PAO1, section 47 of 529 of the complete genome Length = 12874 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gcagcgcctcgccggcggcg 205 |||||||||||||||||||| Sbjct: 9507 gcagcgcctcgccggcggcg 9488
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gccggatcgccgcgccgacg 123 |||||||||||||||||||| Sbjct: 799392 gccggatcgccgcgccgacg 799411
>gb|U05818.1|TSU05818 Trypanosoma sp. El-CP kinetoplast (MURF1) and apocytochrome B (cytB) genes, partial cds, and ATPase subunit 6 (MURF4) gene, complete pre-RNA-edited DNA sequence Length = 862 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 291 cttcccctctcctctctctc 272
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 59823 cttcccctctcctctctctc 59804
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 131870 cttcccctctcctctctctc 131851
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gaccccgccggatcgccgcg 117 |||||||||||||||||||| Sbjct: 5187570 gaccccgccggatcgccgcg 5187589
>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0015B15 Length = 123083 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcc 35 |||||||||||||||||||| Sbjct: 6635 ttcccctctcctctctctcc 6616
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcc 35 |||||||||||||||||||| Sbjct: 131845 ttcccctctcctctctctcc 131826
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 38490 cttcccctctcctctctctc 38471
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 94917 cttcccctctcctctctctc 94898
>dbj|BS000197.1| Pan troglodytes chromosome 22 clone:PTB-108M20, map 22, complete sequences Length = 192863 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 22320 tcccctctcctctctctccc 22339
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 ttcccctctcctctctctcccccc 39 ||||||||||||||||||| |||| Sbjct: 131396 ttcccctctcctctctctctcccc 131373
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gatcgccgcgccgacgcggg 127 |||||||||||||||||||| Sbjct: 72310 gatcgccgcgccgacgcggg 72291
>gb|AC005023.1|AC005023 Homo sapiens BAC clone GS1-421I3 from Xq25-q26, complete sequence Length = 170967 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 68261 cttcccctctcctctctctc 68242
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 2/3 Length = 348050 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 123237 tcccctctcctctctctccc 123218
>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 Length = 340000 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 75840 tcccctctcctctctctccc 75859
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 1649577 gccgccaagttggcgccgca 1649558 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 1449356 gccgccaagttggcgccgca 1449337 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 582641 gccgccaagttggcgccgca 582660
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 3499405 gccgccaagttggcgccgca 3499386 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 3428300 gccgccaagttggcgccgca 3428319 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 2048691 gccgccaagttggcgccgca 2048710 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccgccaagttggcgccgca 176 |||||||||||||||||||| Sbjct: 1590023 gccgccaagttggcgccgca 1590004
>gb|AC155246.1| Mus musculus BAC clone RP24-303C15 from 14, complete sequence Length = 151983 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 36119 cttcccctctcctctctctc 36100
>gb|AC124975.13| Mus musculus chromosome 1, clone RP23-262M12, complete sequence Length = 219930 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 202141 tcccctctcctctctctccc 202122
>gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, complete sequence Length = 239588 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 8515 cttcccctctcctctctctc 8534
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 260892 tcccctctcctctctctccc 260911 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 243197 tcccctctcctctctctccc 243216
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 267890 tcccctctcctctctctccc 267909 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 250196 tcccctctcctctctctccc 250215
>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence Length = 162528 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctctcctctctctcccccca 40 |||||||||||||||||||| Sbjct: 142321 ctctcctctctctcccccca 142302
>gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, complete sequence Length = 201924 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctcctctctctccc 36 |||||||||||||||||||| Sbjct: 58694 tcccctctcctctctctccc 58675
>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence Length = 190423 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 tcccctctcctctctctcccccca 40 |||||||||||||||||| ||||| Sbjct: 178164 tcccctctcctctctctctcccca 178141
>gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, complete sequence Length = 236774 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 tcccctctcctctctctcccccca 40 |||||||||||||||||| ||||| Sbjct: 227649 tcccctctcctctctctctcccca 227672
>gb|AC139159.3| Mus musculus BAC clone RP23-119I13 from 8, complete sequence Length = 185950 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctcctctctctc 34 |||||||||||||||||||| Sbjct: 62430 cttcccctctcctctctctc 62449
>gb|AC158981.2| Mus musculus BAC clone RP23-230C10 from chromosome 14, complete sequence Length = 213277 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 16 ttcccctctcc-tctctctccccccaattcgctctc 50 ||||||||||| |||||||||||||| ||| ||||| Sbjct: 64118 ttcccctctccctctctctccccccacttctctctc 64083 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,811,922 Number of Sequences: 3902068 Number of extensions: 1811922 Number of successful extensions: 196195 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 190879 Number of HSP's gapped (non-prelim): 5318 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
