ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl41a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase gene cluster, complete sequence; ternary complex factor MIP1-like gene, complete cds; putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 94077 Score = 83.8 bits (42), Expect = 4e-13 Identities = 134/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 28210 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 28266 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | ||||||||||| | |||||||||||| |||| |||| |||||||||||||||| Sbjct: 28267 tctcactggcttccaagggcctcgaggggcgtatctcaccgtcccttggcaacctcaccg 28326 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 28327 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 28370 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 9218 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 9277 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 9278 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 9337 Query: 237 caacct 242 |||||| Sbjct: 9338 caacct 9343 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 34688 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 34747 Query: 186 gcatgagaagacctcccttctccagtt 212 ||| |||| || ||| ||| ||||||| Sbjct: 34748 gcaagagaggaactcacttgtccagtt 34774 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 38845 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 38904 Query: 177 ctgca 181 |||| Sbjct: 38905 ttgca 38909 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 15319 ttttcatgttagtttcaccagaaaaccatgcag 15351 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 34830 gactgctgcgcatgggaagggatcacctgca 34860 Score = 44.1 bits (22), Expect = 0.37 Identities = 51/60 (85%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 280 tgggaagggatcacctgcagcagtcccaataggacggtcactggtgtttcactggcttct 339 |||||||||||||||||||| || ||||||| || |||| |||||||||||||||| Sbjct: 2465 tgggaagggatcacctgcaga---ccagataggaccgtgactgatgtttcactggcttct 2521 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 tacagactgctgcacttgggaagggatcacctgcagc 300 |||||| ||||||| ||||| ||||||||||||||| Sbjct: 22065 tacagattgctgcaaatgggatgggatcacctgcagc 22101 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 2236 ctagtatcaccagaaaaccatgcag 2260
>gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase genes, complete cds Length = 42445 Score = 83.8 bits (42), Expect = 4e-13 Identities = 134/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 27681 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 27737 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | ||||||||||| | |||||||||||| |||| |||| |||||||||||||||| Sbjct: 27738 tctcactggcttccaagggcctcgaggggcgtatctcaccgtcccttggcaacctcaccg 27797 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 27798 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 27841 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 8690 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 8749 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 8750 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 8809 Query: 237 caacct 242 |||||| Sbjct: 8810 caacct 8815 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 34193 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 34252 Query: 186 gcatgagaagacctcccttctccagtt 212 ||| |||| || ||| ||| ||||||| Sbjct: 34253 gcaagagaggaactcacttgtccagtt 34279 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 38350 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 38409 Query: 177 ctgca 181 |||| Sbjct: 38410 ttgca 38414 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 14790 ttttcatgttagtttcaccagaaaaccatgcag 14822 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 34335 gactgctgcgcatgggaagggatcacctgca 34365 Score = 44.1 bits (22), Expect = 0.37 Identities = 51/60 (85%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 280 tgggaagggatcacctgcagcagtcccaataggacggtcactggtgtttcactggcttct 339 |||||||||||||||||||| || ||||||| || |||| |||||||||||||||| Sbjct: 1937 tgggaagggatcacctgcaga---ccagataggaccgtgactgatgtttcactggcttct 1993 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 tacagactgctgcacttgggaagggatcacctgcagc 300 |||||| ||||||| ||||| ||||||||||||||| Sbjct: 21536 tacagattgctgcaaatgggatgggatcacctgcagc 21572 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 1708 ctagtatcaccagaaaaccatgcag 1732
>gb|AY714494.1| Oryza sativa (indica cultivar-group) clone OsInlk6 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3634 Score = 83.8 bits (42), Expect = 4e-13 Identities = 134/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 388 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 444 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | ||||||||||| | |||||||||||| |||| |||| |||||||||||||||| Sbjct: 445 tctcactggcttccaagggcctcgaggggcgtatctcaccgtcccttggcaacctcaccg 504 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 505 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 548
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and ternary complex factor MIP1-like genes, complete cds; retrotransposon putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 102522 Score = 75.8 bits (38), Expect = 1e-10 Identities = 133/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 35923 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 35979 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | || |||||||| | ||||| |||||| ||||||||| |||||||||||||||| Sbjct: 35980 tctcgctggcttccaagggccttgaggggcgtatctcgccgtcccttggcaacctcaccg 36039 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 36040 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 36083 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 16042 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 16101 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 16102 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 16161 Query: 237 caacct 242 |||||| Sbjct: 16162 caacct 16167 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 43251 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 43310 Query: 186 gcatgagaagacctcccttctccagttccttgctgggctctcg 228 ||| |||| || ||| || ||||||| || ||||||||||| Sbjct: 43311 gcaagagaggaactcactcatccagtttctcactgggctctcg 43353 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 47407 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 47466 Query: 177 ctgca 181 |||| Sbjct: 47467 ttgca 47471 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 43393 gactgctgcgcatgggaagggatcacctgca 43423 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 264 tacagactgctgcacttgggaagggatcacctgcagc 300 |||||| ||||||| ||||| ||||||||||||||| Sbjct: 29120 tacagattgctgcaaatgggatgggatcacctgcagc 29156 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| ||||||||||||||| |||||||| Sbjct: 22408 ttttcatgttagtttcaccagaaagccatgcag 22440 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 9150 ctagtatcaccagaaaaccatgcag 9174 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 2353 ctagtatcaccagaaaaccatgcag 2377 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tgggaagggatcacctgcag 299 |||||||||||||||||||| Sbjct: 2582 tgggaagggatcacctgcag 2601
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 133/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 2948585 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 2948529 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | || |||||||| | ||||| |||||| ||||||||| |||||||||||||||| Sbjct: 2948528 tctcgctggcttccaagggccttgaggggcgtatctcgccgtcccttggcaacctcaccg 2948469 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 2948468 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 2948425 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 2968506 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 2968447 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 2968446 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 2968387 Query: 237 caacct 242 |||||| Sbjct: 2968386 caacct 2968381 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 2941326 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 2941267 Query: 186 gcatgagaagacctcccttctccagttccttgctgggctctcg 228 ||| |||| || ||| || ||||||| || ||||||||||| Sbjct: 2941266 gcaagagaggaactcactcatccagtttctcactgggctctcg 2941224 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagc 300 |||||||||||||| |||||||| |||||||||||| Sbjct: 3094809 acagactgctgcacctgggaaggcatcacctgcagc 3094774 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcag 302 |||||||||||| | |||||||| |||||||||||||| Sbjct: 3126420 acagactgctgctcatgggaaggcatcacctgcagcag 3126383 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcag 302 |||||||||||| | |||||||| |||||||||||||| Sbjct: 3099224 acagactgctgctcatgggaaggcatcacctgcagcag 3099187 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 2962103 ttttcatgttagtttcaccagaaaaccatgcag 2962071 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 2937170 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 2937111 Query: 177 ctgca 181 |||| Sbjct: 2937110 ttgca 2937106 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 tgctgcacttgggaagggatcacctgc 297 |||||||| |||||||||||||||||| Sbjct: 3129101 tgctgcacatgggaagggatcacctgc 3129075 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 369 ccttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||||| |||| ||| |||||||||||| Sbjct: 3129006 ccttggcaacctcaccggcctgatgcgcctcaacctgtc 3128968 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 tgctgcacttgggaagggatcacctgc 297 |||||||| |||||||||||||||||| Sbjct: 3104584 tgctgcacatgggaagggatcacctgc 3104558 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Minus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 2941184 gactgctgcgcatgggaagggatcacctgca 2941154 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Plus Query: 162 ctctccagccagttcctgcagggagcatgagaagacctcccttctccagttcct 215 |||||| |||| ||||||| |||||| ||||||| ||| || ||||||||||| Sbjct: 3113499 ctctcctgccacctcctgcacggagcaggagaagagctcactcctccagttcct 3113552 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggctctcgc 229 ||||| ||||||| ||| || |||| ||||||||||||||| |||| Sbjct: 3037798 gagcaggagaagagctctctcctccggttccttgctgggctatcgc 3037843 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggct 224 ||||| ||||||| ||| || |||| ||||||||||||||| Sbjct: 3000854 gagcaggagaagagctctctcctccggttccttgctgggct 3000814 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 2982197 ctagtatcaccagaaaaccatgcag 2982173 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 2975399 ctagtatcaccagaaaaccatgcag 2975375 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 tacagactgctgcacttgggaagggatcacctgcagc 300 |||||| ||||||| ||||| ||||||||||||||| Sbjct: 2955389 tacagattgctgcaaatgggatgggatcacctgcagc 2955353 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gcaactcgttgtccggtggc 429 |||||||||||||||||||| Sbjct: 3094664 gcaactcgttgtccggtggc 3094645 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgcag 299 ||||||||| | |||||||| ||||||||||| Sbjct: 3037882 gactgctgcgcgtgggaaggcatcacctgcag 3037913 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tgggaagggatcacctgcag 299 |||||||||||||||||||| Sbjct: 2981968 tgggaagggatcacctgcag 2981949
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 133/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 74224 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 74168 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | || |||||||| | ||||| |||||| ||||||||| |||||||||||||||| Sbjct: 74167 tctcgctggcttccaagggccttgaggggcgtatctcgccgtcccttggcaacctcaccg 74108 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 74107 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 74064 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 94145 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 94086 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 94085 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 94026 Query: 237 caacct 242 |||||| Sbjct: 94025 caacct 94020 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 66965 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 66906 Query: 186 gcatgagaagacctcccttctccagttccttgctgggctctcg 228 ||| |||| || ||| || ||||||| || ||||||||||| Sbjct: 66905 gcaagagaggaactcactcatccagtttctcactgggctctcg 66863 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 87742 ttttcatgttagtttcaccagaaaaccatgcag 87710 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 62809 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 62750 Query: 177 ctgca 181 |||| Sbjct: 62749 ttgca 62745 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Minus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 66823 gactgctgcgcatgggaagggatcacctgca 66793 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggct 224 ||||| ||||||| ||| || |||| ||||||||||||||| Sbjct: 126493 gagcaggagaagagctctctcctccggttccttgctgggct 126453 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 107836 ctagtatcaccagaaaaccatgcag 107812 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 101038 ctagtatcaccagaaaaccatgcag 101014 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 tacagactgctgcacttgggaagggatcacctgcagc 300 |||||| ||||||| ||||| ||||||||||||||| Sbjct: 81028 tacagattgctgcaaatgggatgggatcacctgcagc 80992 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tgggaagggatcacctgcag 299 |||||||||||||||||||| Sbjct: 107607 tgggaagggatcacctgcag 107588
>dbj|AK121860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102P14, full insert sequence Length = 3723 Score = 75.8 bits (38), Expect = 1e-10 Identities = 133/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagtcccaataggacggtcactggtg 325 |||||||||||| ||||||||| |||||||||| | | || |||||||||| | || Sbjct: 3070 cagactgctgcaaatgggaaggggtcacctgcag---tgcagatgggacggtcaccgatg 3014 Query: 326 tttcactggcttctcaaggcctcgaggggtccgtctcgccgttccttggcaacctcacca 385 | || |||||||| | ||||| |||||| ||||||||| |||||||||||||||| Sbjct: 3013 tctcgctggcttccaagggccttgaggggcgtatctcgccgtcccttggcaacctcaccg 2954 Query: 386 gcctcttgcacctcaacctgtcgtgcaactcgttgtccggtggc 429 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 2953 gcctgctgcgcctcaacctgtcccacaactcgctgtccggtggc 2910
>dbj|AK108027.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A09, full insert sequence Length = 2223 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 359 tctcgccgttccttggcaacctcaccagcctcttgcacctcaacctgtcgtgcaactcgt 418 ||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||||| Sbjct: 1475 tctcgccgtcccttggcaacctcaccggcctgctgcgcctcaacctgtcccacaactcgc 1416 Query: 419 tgtccggtggc 429 ||||||||||| Sbjct: 1415 tgtccggtggc 1405
>gb|AY714492.1| Oryza sativa (indica cultivar-group) clone OsInlk3 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3302 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 151 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 210 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 211 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 270 Query: 237 caacct 242 |||||| Sbjct: 271 caacct 276
>dbj|AP005896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0032C09 Length = 127263 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 14617 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 14558 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 14557 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 14498 Query: 237 caacct 242 |||||| Sbjct: 14497 caacct 14492 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 8214 ttttcatgttagtttcaccagaaaaccatgcag 8182 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggctctcgc 229 ||||| ||||||| ||| || |||| ||||||||||||||| |||| Sbjct: 83909 gagcaggagaagagctctctcctccggttccttgctgggctatcgc 83954 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggct 224 ||||| ||||||| ||| || |||| ||||||||||||||| Sbjct: 46965 gagcaggagaagagctctctcctccggttccttgctgggct 46925 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 28308 ctagtatcaccagaaaaccatgcag 28284 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 21510 ctagtatcaccagaaaaccatgcag 21486 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 tacagactgctgcacttgggaagggatcacctgcagc 300 |||||| ||||||| ||||| ||||||||||||||| Sbjct: 1500 tacagattgctgcaaatgggatgggatcacctgcagc 1464 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgcag 299 ||||||||| | |||||||| ||||||||||| Sbjct: 83993 gactgctgcgcgtgggaaggcatcacctgcag 84024 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tgggaagggatcacctgcag 299 |||||||||||||||||||| Sbjct: 28079 tgggaagggatcacctgcag 28060
>dbj|AK111546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047P09, full insert sequence Length = 3376 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||||| |||||| |||| ||||||||||||||||||| |||| |||| || Sbjct: 108 catatcttccctgagccttggtctcctgctgctgatctccttggcttctctcaccagctc 167 Query: 177 ctgcagggagcatgagaagacctcccttctccagttccttgctgggctctcgcgggatgg 236 ||||| ||||| |||||| ||| |||| ||||||||| || | |||||||| || || Sbjct: 168 ctgcacagagcaggagaagggctctcttcaccagttcctcgccgagctctcgcaagacgg 227 Query: 237 caacct 242 |||||| Sbjct: 228 caacct 233
>gb|AY714495.1| Oryza sativa (indica cultivar-group) clone OsInlk7 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3590 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 323 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 382 Query: 186 gcatgagaagacctcccttctccagtt 212 ||| |||| || ||| ||| ||||||| Sbjct: 383 gcaagagaggaactcacttgtccagtt 409 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 465 gactgctgcgcatgggaagggatcacctgca 495
>dbj|AK111680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168E03, full insert sequence Length = 3393 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 126 ccttggccttgctctcgtgctgctgatctccttggcctctccagccagttcctgcaggga 185 |||||||| |||||| ||||||||| ||| |||||||||||| ||||||| |||| || Sbjct: 111 ccttggccatgctcttgtgctgctgctcttcttggcctctcccaccagttcttgcaccga 170 Query: 186 gcatgagaagacctcccttctccagttccttgctgggctctcg 228 ||| |||| || ||| || ||||||| || ||||||||||| Sbjct: 171 gcaagagaggaactcactcatccagtttctcactgggctctcg 213 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgca 298 ||||||||| | ||||||||||||||||||| Sbjct: 253 gactgctgcgcatgggaagggatcacctgca 283
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagc 300 |||||||||||||| |||||||| |||||||||||| Sbjct: 22963 acagactgctgcacctgggaaggcatcacctgcagc 22928 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcag 302 |||||||||||| | |||||||| |||||||||||||| Sbjct: 54574 acagactgctgctcatgggaaggcatcacctgcagcag 54537 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcag 302 |||||||||||| | |||||||| |||||||||||||| Sbjct: 27378 acagactgctgctcatgggaaggcatcacctgcagcag 27341 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 tgctgcacttgggaagggatcacctgc 297 |||||||| |||||||||||||||||| Sbjct: 57255 tgctgcacatgggaagggatcacctgc 57229 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 369 ccttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||||| |||| ||| |||||||||||| Sbjct: 57160 ccttggcaacctcaccggcctgatgcgcctcaacctgtc 57122 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 tgctgcacttgggaagggatcacctgc 297 |||||||| |||||||||||||||||| Sbjct: 32738 tgctgcacatgggaagggatcacctgc 32712 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Plus Query: 162 ctctccagccagttcctgcagggagcatgagaagacctcccttctccagttcct 215 |||||| |||| ||||||| |||||| ||||||| ||| || ||||||||||| Sbjct: 41653 ctctcctgccacctcctgcacggagcaggagaagagctcactcctccagttcct 41706 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gcaactcgttgtccggtggc 429 |||||||||||||||||||| Sbjct: 22818 gcaactcgttgtccggtggc 22799
>dbj|AK100447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H21, full insert sequence Length = 2535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 265 acagactgctgcacttgggaagggatcacctgcagc 300 |||||||||||||| |||||||| |||||||||||| Sbjct: 294 acagactgctgcacctgggaaggcatcacctgcagc 329 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcaactcgttgtccggtggc 429 |||||||||||||||||||| Sbjct: 439 gcaactcgttgtccggtggc 458
>dbj|AK059616.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G05, full insert sequence Length = 1258 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagc 300 |||||||||||||| |||||||| |||||||||||| Sbjct: 917 acagactgctgcacctgggaaggcatcacctgcagc 882 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gcaactcgttgtccggtggc 429 |||||||||||||||||||| Sbjct: 772 gcaactcgttgtccggtggc 753
>gb|AY714497.1| Oryza sativa (japonica cultivar-group) clone OsJalk8 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3428 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 208 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 267 Query: 177 ctgca 181 |||| Sbjct: 268 ttgca 272
>gb|AY714496.1| Oryza sativa (indica cultivar-group) clone OsInlk8 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3428 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 117 cataccttcccttggccttgctctcgtgctgctgatctccttggcctctccagccagttc 176 |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||||| Sbjct: 208 cataacttcctttggtcttgctcttgcgctgctgctcttcttggcctctcccaccagttc 267 Query: 177 ctgca 181 |||| Sbjct: 268 ttgca 272
>gb|AY714493.1| Oryza sativa (indica cultivar-group) clone OsInlk4 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3301 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 28 ttttcatgttagtttcaccagaaaaccatgcag 60
>dbj|AK100376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M06, full insert sequence Length = 3393 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 43 ttttcatcctagtttcaccagaaaaccatgcag 75 ||||||| |||||||||||||||||||||||| Sbjct: 74 ttttcatgttagtttcaccagaaaaccatgcag 106
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcagt 303 ||||||||||| | |||||||| ||||||||||||||| Sbjct: 28524238 acagactgctgtaaatgggaaggcatcacctgcagcagt 28524200 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 371 ttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||| | ||| ||||||||||||||| Sbjct: 28508226 ttggcaacctcaccgggctcacgcacctcaacctgtc 28508190 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 371 ttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||| | ||| ||||||||||||||| Sbjct: 28486942 ttggcaacctcaccgggctcacgcacctcaacctgtc 28486906 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 267 agactgctgcacttgggaagggatcacctgcagcag 302 ||||||||||| |||||||| |||| ||||||||| Sbjct: 28470072 agactgctgcaaatgggaaggcatcaactgcagcag 28470107
>gb|AF255774.1|AF255774 Mus musculus anion exchanger 2 (Slc4a2) gene, complete cds, alternatively spliced Length = 17084 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 195 gacctcccttctccagttccttg 217 ||||||||||||||||||||||| Sbjct: 4408 gacctcccttctccagttccttg 4430
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcagt 303 ||||||||||| | |||||||| ||||||||||||||| Sbjct: 131271 acagactgctgtaaatgggaaggcatcacctgcagcagt 131233 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 371 ttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||| | ||| ||||||||||||||| Sbjct: 115259 ttggcaacctcaccgggctcacgcacctcaacctgtc 115223 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 371 ttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||| | ||| ||||||||||||||| Sbjct: 93975 ttggcaacctcaccgggctcacgcacctcaacctgtc 93939 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 267 agactgctgcacttgggaagggatcacctgcagcag 302 ||||||||||| |||||||| |||| ||||||||| Sbjct: 77105 agactgctgcaaatgggaaggcatcaactgcagcag 77140
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 265 acagactgctgcacttgggaagggatcacctgcagcagt 303 ||||||||||| | |||||||| ||||||||||||||| Sbjct: 15716 acagactgctgtaaatgggaaggcatcacctgcagcagt 15678
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 tgctgcacttgggaagggatcacctgc 297 |||||||| |||||||||||||||||| Sbjct: 1288 tgctgcacatgggaagggatcacctgc 1262 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 369 ccttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||||| |||| ||| |||||||||||| Sbjct: 1193 ccttggcaacctcaccggcctgatgcgcctcaacctgtc 1155
>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence Length = 182659 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 195 gacctcccttctccagttccttg 217 ||||||||||||||||||||||| Sbjct: 109592 gacctcccttctccagttccttg 109570
>gb|AY714491.1| Oryza sativa (indica cultivar-group) clone OsInlk2 putative leucine-rich repeat receptor-like kinase mRNA, complete cds Length = 3442 Score = 44.1 bits (22), Expect = 0.37 Identities = 51/60 (85%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 280 tgggaagggatcacctgcagcagtcccaataggacggtcactggtgtttcactggcttct 339 |||||||||||||||||||| || ||||||| || |||| |||||||||||||||| Sbjct: 440 tgggaagggatcacctgcaga---ccagataggaccgtgactgatgtttcactggcttct 496 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 211 ctagtatcaccagaaaaccatgcag 235
>gb|BC072205.1| Xenopus laevis hypothetical protein MGC81181, mRNA (cDNA clone MGC:81181 IMAGE:6318286), complete cds Length = 1689 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatg 72 |||||||||||||||||||||| Sbjct: 1632 ctagtttcaccagaaaaccatg 1611
>dbj|AK107566.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C08, full insert sequence Length = 2248 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggctctcgc 229 ||||| ||||||| ||| || |||| ||||||||||||||| |||| Sbjct: 179 gagcaggagaagagctctctcctccggttccttgctgggctatcgc 224 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 268 gactgctgcacttgggaagggatcacctgcag 299 ||||||||| | |||||||| ||||||||||| Sbjct: 263 gactgctgcgcgtgggaaggcatcacctgcag 294
>dbj|AK101257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032G23, full insert sequence Length = 2673 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 266 cagactgctgcacttgggaagggatcacctgcagcagt 303 |||||||||| | |||||||| ||||||||||||||| Sbjct: 360 cagactgctgtaaatgggaaggcatcacctgcagcagt 397
>dbj|AK067517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111E23, full insert sequence Length = 2830 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Minus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggctctcgc 229 ||||| ||||||| ||| || |||| ||||||||||||||| |||| Sbjct: 2583 gagcaggagaagagctctctcctccggttccttgctgggctatcgc 2538
>gb|AC102775.6| Mus musculus chromosome 8, clone RP23-115C10, complete sequence Length = 185846 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaacaagacagagagcaagga 110 ||||||||||||||||||||| Sbjct: 30870 aaacaagacagagagcaagga 30850
>emb|AL606803.10| Human DNA sequence from clone RP11-776H12 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 54039 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 gaattgcacataccttccctt 129 ||||||||||||||||||||| Sbjct: 18677 gaattgcacataccttccctt 18697
>dbj|AK111975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F11, full insert sequence Length = 1729 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 1529 ctagtatcaccagaaaaccatgcag 1505 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tgggaagggatcacctgcag 299 |||||||||||||||||||| Sbjct: 1300 tgggaagggatcacctgcag 1281
>dbj|AK111871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041F16, full insert sequence Length = 3503 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ctagtttcaccagaaaaccatgcag 75 ||||| ||||||||||||||||||| Sbjct: 159 ctagtatcaccagaaaaccatgcag 183 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tgggaagggatcacctgcag 299 |||||||||||||||||||| Sbjct: 388 tgggaagggatcacctgcag 407
>dbj|AK110293.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G06, full insert sequence Length = 3272 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 371 ttggcaacctcaccagcctcttgcacctcaacctgtc 407 |||||||||||||| | ||| ||||||||||||||| Sbjct: 212 ttggcaacctcaccgggctcacgcacctcaacctgtc 248
>dbj|AK102276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D19, full insert sequence Length = 3823 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 184 gagcatgagaagacctcccttctccagttccttgctgggct 224 ||||| ||||||| ||| || |||| ||||||||||||||| Sbjct: 3291 gagcaggagaagagctctctcctccggttccttgctgggct 3251
>gb|AC149320.2| Phakopsora pachyrhizi clone JGIAFNA-101K18, complete sequence Length = 36340 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ctgatctccttggcctctcca 168 ||||||||||||||||||||| Sbjct: 31333 ctgatctccttggcctctcca 31353
>gb|AC149068.4| Mus musculus BAC clone RP23-7G19 from 18, complete sequence Length = 232071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 tacagactgctgcacttggga 284 ||||||||||||||||||||| Sbjct: 102337 tacagactgctgcacttggga 102317
>gb|AC123606.11| Mus musculus chromosome 15, clone RP24-528D12, complete sequence Length = 175623 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tgcacttgggaagggatcacc 294 ||||||||||||||||||||| Sbjct: 21635 tgcacttgggaagggatcacc 21655
>gb|AC165240.6| Mus musculus chromosome 5, clone RP24-174P7, complete sequence Length = 196437 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ttccttggcaacctcaccag 386 |||||||||||||||||||| Sbjct: 172536 ttccttggcaacctcaccag 172555
>ref|XM_416047.1| PREDICTED: Gallus gallus similar to splicing factor, arginine/serine-rich 2, interacting protein; SC35-interacting protein 1 (LOC417805), mRNA Length = 5617 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ttcaccagaaaaccatgcagacag 79 |||||||| ||||||||||||||| Sbjct: 5477 ttcaccagcaaaccatgcagacag 5500
>gb|AC140492.3| Mus musculus BAC clone RP24-137B3 from chromosome 5, complete sequence Length = 157199 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ttccttggcaacctcaccag 386 |||||||||||||||||||| Sbjct: 1420 ttccttggcaacctcaccag 1439
>gb|AY350710.1| Brassica oleracea clone BAC Bo37N21, partial sequence Length = 78346 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cctcaccagcctcttgcacc 397 |||||||||||||||||||| Sbjct: 70779 cctcaccagcctcttgcacc 70760
>gb|AC153504.6| Mus musculus 10 BAC RP23-324E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200051 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cagttttcaaacaagacaga 101 |||||||||||||||||||| Sbjct: 167506 cagttttcaaacaagacaga 167487
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ttcaaacaagacagagagcaagga 110 ||||||||||||||| |||||||| Sbjct: 24415 ttcaaacaagacagaaagcaagga 24438
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gttccttggcaacctcacca 385 |||||||||||||||||||| Sbjct: 121659 gttccttggcaacctcacca 121640
>gb|AC099675.2| Homo sapiens chromosome 1 clone RP11-459D6, complete sequence Length = 162806 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 acagagagcaaggaattgca 116 |||||||||||||||||||| Sbjct: 54567 acagagagcaaggaattgca 54586
>gb|BC053388.1| Mus musculus similar to mastermind-like 2; mastermind (Drosophila)-like 2, mRNA (cDNA clone MGC:60867 IMAGE:30054622), complete cds Length = 2955 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 caccagcctcttgcacctca 400 |||||||||||||||||||| Sbjct: 64 caccagcctcttgcacctca 83
>dbj|AK069356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C17, full insert sequence Length = 3807 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 267 agactgctgcacttgggaagggatcacctgcagcag 302 ||||||||||| |||||||| |||| ||||||||| Sbjct: 2977 agactgctgcaaatgggaaggcatcaactgcagcag 2942
>dbj|AK065392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022B04, full insert sequence Length = 3566 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 267 agactgctgcacttgggaagggatcacctgcagcag 302 ||||||||||| |||||||| |||| ||||||||| Sbjct: 355 agactgctgcaaatgggaaggcatcaactgcagcag 390
>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204618 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cagttttcaaacaagacaga 101 |||||||||||||||||||| Sbjct: 62054 cagttttcaaacaagacaga 62035
>gb|AC161499.2| Mus musculus chromosome 5, clone RP24-334E1, complete sequence Length = 163642 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ttccttggcaacctcaccag 386 |||||||||||||||||||| Sbjct: 9742 ttccttggcaacctcaccag 9761 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,579,199 Number of Sequences: 3902068 Number of extensions: 3579199 Number of successful extensions: 73412 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73117 Number of HSP's gapped (non-prelim): 279 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
