>ref|XM_470800.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2936

 Score =  276 bits (139), Expect = 5e-71
 Identities = 280/327 (85%)
 Strand = Plus / Plus

                                                                       
Query: 79  cggcggggaacgaccggagggacgccgcgctgggcggcctggccgtgctccccgacgagc 138
           |||||||||||| ||||| ||| || ||||||||| |||| || | ||||||||||||| 
Sbjct: 79  cggcggggaacggccggatggaggcggcgctgggctgcctcgcggcgctccccgacgagg 138

                                                                       
Query: 139 tactctgcgccatcgtcgacctcctccagcccaccgacatcggacgcctcgcatgcgtca 198
           | ||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||
Sbjct: 139 tgctctgcgccgtcgtcgacctcctcccgcccaccgacgtcggccgcctcgcctgcgtca 198

                                                                       
Query: 199 gcagtgtcatgtacatactttgcaacgaggaacctctctggatgagtaaatacctttccg 258
           ||||||||||||||||||||||||| ||||| |||||||||||||| || |  ||||| |
Sbjct: 199 gcagtgtcatgtacatactttgcaatgaggagcctctctggatgagcaagtgtctttcag 258

                                                                       
Query: 259 ttggtggtcatcttgagtacaaaggttcttggaagaaaacaacgttgtctaggcttagtc 318
           |||| |||| ||||| ||| | ||||||||||||||||||| | |||||||| |||| ||
Sbjct: 259 ttgggggtcttcttgtgtatagaggttcttggaagaaaacagcattgtctagacttaatc 318

                                                                       
Query: 319 tttgcttcgaaaatagtgagcttgagcagaagactcgtcattttgatggattcaactcaa 378
           |||| |  ||||||  |||| || | |||||| |||| ||||||||||| ||||| || |
Sbjct: 319 tttgttcagaaaatgatgagatttaccagaagcctcgccattttgatgggttcaattcca 378

                                      
Query: 379 tgtacttatacaggaggtggtatagat 405
           || ||||||||||||| ||||| ||||
Sbjct: 379 tgcacttatacaggagatggtacagat 405

>dbj|AK065339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L11, full
           insert sequence
          Length = 3140

 Score =  276 bits (139), Expect = 5e-71
 Identities = 280/327 (85%)
 Strand = Plus / Plus

                                                                       
Query: 79  cggcggggaacgaccggagggacgccgcgctgggcggcctggccgtgctccccgacgagc 138
           |||||||||||| ||||| ||| || ||||||||| |||| || | ||||||||||||| 
Sbjct: 115 cggcggggaacggccggatggaggcggcgctgggctgcctcgcggcgctccccgacgagg 174

                                                                       
Query: 139 tactctgcgccatcgtcgacctcctccagcccaccgacatcggacgcctcgcatgcgtca 198
           | ||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||
Sbjct: 175 tgctctgcgccgtcgtcgacctcctcccgcccaccgacgtcggccgcctcgcctgcgtca 234

                                                                       
Query: 199 gcagtgtcatgtacatactttgcaacgaggaacctctctggatgagtaaatacctttccg 258
           ||||||||||||||||||||||||| ||||| |||||||||||||| || |  ||||| |
Sbjct: 235 gcagtgtcatgtacatactttgcaatgaggagcctctctggatgagcaagtgtctttcag 294

                                                                       
Query: 259 ttggtggtcatcttgagtacaaaggttcttggaagaaaacaacgttgtctaggcttagtc 318
           |||| |||| ||||| ||| | ||||||||||||||||||| | |||||||| |||| ||
Sbjct: 295 ttgggggtcttcttgtgtatagaggttcttggaagaaaacagcattgtctagacttaatc 354

                                                                       
Query: 319 tttgcttcgaaaatagtgagcttgagcagaagactcgtcattttgatggattcaactcaa 378
           |||| |  ||||||  |||| || | |||||| |||| ||||||||||| ||||| || |
Sbjct: 355 tttgttcagaaaatgatgagatttaccagaagcctcgccattttgatgggttcaattcca 414

                                      
Query: 379 tgtacttatacaggaggtggtatagat 405
           || ||||||||||||| ||||| ||||
Sbjct: 415 tgcacttatacaggagatggtacagat 441

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                            
Query: 79       cggcggggaacgaccggagggacgccgcgctgggcggcctggccgtgctccccgacgagc 138
                |||||||||||| ||||| ||| || ||||||||| |||| || | ||||||||||||| 
Sbjct: 15452524 cggcggggaacggccggatggaggcggcgctgggctgcctcgcggcgctccccgacgagg 15452583

                                                                            
Query: 139      tactctgcgccatcgtcgacctcctccagcccaccgacatcggacgcctcgcatgcgtca 198
                | ||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||
Sbjct: 15452584 tgctctgcgccgtcgtcgacctcctcccgcccaccgacgtcggccgcctcgcctgcgtca 15452643

                    
Query: 199      gcag 202
                ||||
Sbjct: 15452644 gcag 15452647



 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                            
Query: 200      cagtgtcatgtacatactttgcaacgaggaacctctctggatgagtaaatacctttccgt 259
                |||||||||||||||||||||||| ||||| |||||||||||||| || |  ||||| ||
Sbjct: 15453459 cagtgtcatgtacatactttgcaatgaggagcctctctggatgagcaagtgtctttcagt 15453518

                                                                    
Query: 260      tggtggtcatcttgagtacaaaggttcttggaagaaaacaacgttgtctagg 311
                ||| |||| ||||| ||| | ||||||||||||||||||| | |||||||||
Sbjct: 15453519 tgggggtcttcttgtgtatagaggttcttggaagaaaacagcattgtctagg 15453570

>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score =  127 bits (64), Expect = 3e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                         
Query: 79    cggcggggaacgaccggagggacgccgcgctgggcggcctggccgtgctccccgacgagc 138
             |||||||||||| ||||| ||| || ||||||||| |||| || | ||||||||||||| 
Sbjct: 49002 cggcggggaacggccggatggaggcggcgctgggctgcctcgcggcgctccccgacgagg 48943

                                                                         
Query: 139   tactctgcgccatcgtcgacctcctccagcccaccgacatcggacgcctcgcatgcgtca 198
             | ||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||
Sbjct: 48942 tgctctgcgccgtcgtcgacctcctcccgcccaccgacgtcggccgcctcgcctgcgtca 48883

                 
Query: 199   gcag 202
             ||||
Sbjct: 48882 gcag 48879



 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Minus

                                                                         
Query: 200   cagtgtcatgtacatactttgcaacgaggaacctctctggatgagtaaatacctttccgt 259
             |||||||||||||||||||||||| ||||| |||||||||||||| || |  ||||| ||
Sbjct: 48067 cagtgtcatgtacatactttgcaatgaggagcctctctggatgagcaagtgtctttcagt 48008

                                                                 
Query: 260   tggtggtcatcttgagtacaaaggttcttggaagaaaacaacgttgtctagg 311
             ||| |||| ||||| ||| | ||||||||||||||||||| | |||||||||
Sbjct: 48007 tgggggtcttcttgtgtatagaggttcttggaagaaaacagcattgtctagg 47956

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 3e-26
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                            
Query: 79       cggcggggaacgaccggagggacgccgcgctgggcggcctggccgtgctccccgacgagc 138
                |||||||||||| ||||| ||| || ||||||||| |||| || | ||||||||||||| 
Sbjct: 15447058 cggcggggaacggccggatggaggcggcgctgggctgcctcgcggcgctccccgacgagg 15447117

                                                                            
Query: 139      tactctgcgccatcgtcgacctcctccagcccaccgacatcggacgcctcgcatgcgtca 198
                | ||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||
Sbjct: 15447118 tgctctgcgccgtcgtcgacctcctcccgcccaccgacgtcggccgcctcgcctgcgtca 15447177

                    
Query: 199      gcag 202
                ||||
Sbjct: 15447178 gcag 15447181



 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                            
Query: 200      cagtgtcatgtacatactttgcaacgaggaacctctctggatgagtaaatacctttccgt 259
                |||||||||||||||||||||||| ||||| |||||||||||||| || |  ||||| ||
Sbjct: 15447993 cagtgtcatgtacatactttgcaatgaggagcctctctggatgagcaagtgtctttcagt 15448052

                                                                    
Query: 260      tggtggtcatcttgagtacaaaggttcttggaagaaaacaacgttgtctagg 311
                ||| |||| ||||| ||| | ||||||||||||||||||| | |||||||||
Sbjct: 15448053 tgggggtcttcttgtgtatagaggttcttggaagaaaacagcattgtctagg 15448104

>ref|NM_106477.2| Arabidopsis thaliana transferase, transferring glycosyl groups
           AT1G78280 mRNA, complete cds
          Length = 3556

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 264 ggtcatcttgagtacaaaggttcttggaagaaaacaac 301
           |||| |||||| ||||||||||||||||| ||||||||
Sbjct: 467 ggtcctcttgaatacaaaggttcttggaaaaaaacaac 504

>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I,
             complete sequence
          Length = 95769

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 264   ggtcatcttgagtacaaaggttcttggaagaaaacaac 301
             |||| |||||| ||||||||||||||||| ||||||||
Sbjct: 73220 ggtcctcttgaatacaaaggttcttggaaaaaaacaac 73183

>ref|XM_547189.2| PREDICTED: Canis familiaris similar to insulin-like growth factor
           binding protein, acid labile subunit (LOC490069), mRNA
          Length = 2031

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 113 cggcctggccgtgctccccgacg 135
           |||||||||||||||||||||||
Sbjct: 753 cggcctggccgtgctccccgacg 775

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 101     cgccgcgctgggcggcctggccg 123
               |||||||||||||||||||||||
Sbjct: 1969603 cgccgcgctgggcggcctggccg 1969581



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     cgccgcgctgggcggcctgg 120
               ||||||||||||||||||||
Sbjct: 3522741 cgccgcgctgggcggcctgg 3522760

>emb|AL732395.9| Human DNA sequence from clone RP11-77F5 on chromosome 10 Contains the
             3' end of the gene for uncharacterized hematopoietic
             stem/progenitor cells (MDS026), complete sequence
          Length = 54050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    acccaaacccagcaagcccac 49
             |||||||||||||||||||||
Sbjct: 50479 acccaaacccagcaagcccac 50499

>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 98     ggacgccgcgctgggcggcctggcc 122
              |||||| ||||||||||||||||||
Sbjct: 186682 ggacgcggcgctgggcggcctggcc 186658

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 344     gcagaagactcgtcattttg 363
               ||||||||||||||||||||
Sbjct: 1011876 gcagaagactcgtcattttg 1011857

>ref|XM_570925.1| Cryptococcus neoformans var. neoformans JEC21 phosphate transporter
           (CNE03570) partial mRNA
          Length = 3296

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gcagaagactcgtcattttg 363
           ||||||||||||||||||||
Sbjct: 490 gcagaagactcgtcattttg 471

>ref|XM_776528.1| PREDICTED: Strongylocentrotus purpuratus similar to Circadian
           locomoter output cycles kaput protein (mCLOCK)
           (LOC576191), mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 tcaatgtacttatacaggag 394
           ||||||||||||||||||||
Sbjct: 152 tcaatgtacttatacaggag 171

>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cgcgctgggcggcctggccg 123
             ||||||||||||||||||||
Sbjct: 79697 cgcgctgggcggcctggccg 79716

>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    cgcgctgggcggcctggccg 123
              ||||||||||||||||||||
Sbjct: 344345 cgcgctgggcggcctggccg 344364

>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  cgcgctgggcggcctggccg 123
            ||||||||||||||||||||
Sbjct: 3863 cgcgctgggcggcctggccg 3844

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 98      ggacgccgcgctgggcggcctggc 121
               |||||||||||||||||| |||||
Sbjct: 8039107 ggacgccgcgctgggcggactggc 8039130

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 104     cgcgctgggcggcctggccgtgct 127
               ||||||| ||||||||||||||||
Sbjct: 1852817 cgcgctgcgcggcctggccgtgct 1852794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,685,257
Number of Sequences: 3902068
Number of extensions: 2685257
Number of successful extensions: 50003
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49615
Number of HSP's gapped (non-prelim): 388
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)