ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl41a02 |
|---|---|
| Clone Library Name | barley_pub |
>SAPS3_CHICK (Q5F471) SAPS domain family member 3| Length = 873 Score = 69.7 bits (169), Expect = 3e-12 Identities = 32/84 (38%), Positives = 53/84 (63%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L ++S +DT+L++E+ T ++QECKA N +LI FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVS 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 +++EE P D ++K +K+P I+CE Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCE 83
>SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-induced| transcript 4-associated protein SAPL) (Protein phosphatase 6 regulatory subunit 3) Length = 873 Score = 69.3 bits (168), Expect = 4e-12 Identities = 32/84 (38%), Positives = 53/84 (63%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L ++S +DT+L++E+ T ++QECKA N +LI FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 +++EE P D ++K +K+P I+CE Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCE 83
>SAPS3_MOUSE (Q922D4) SAPS domain family member 3| Length = 844 Score = 69.3 bits (168), Expect = 4e-12 Identities = 32/84 (38%), Positives = 53/84 (63%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L ++S +DT+L++E+ T ++QECKA N +LI FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 +++EE P D ++K +K+P I+CE Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCE 83
>SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2| Length = 923 Score = 67.8 bits (164), Expect = 1e-11 Identities = 34/84 (40%), Positives = 51/84 (60%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L+ S VD +LDKE+ T I+QECKA N +L++FL + +E+L+ Sbjct: 1 MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVN 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 + ++ P D E+K FK+P ACE Sbjct: 60 LITQDPPQDMEEKVRFKYPNTACE 83
>SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B| Length = 850 Score = 66.2 bits (160), Expect = 3e-11 Identities = 30/84 (35%), Positives = 51/84 (60%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L ++S +DT+L+++ T I+QECKA N +L+ FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVT 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 ++ EE P D ++K +K+P ++CE Sbjct: 60 FITEEPPQDMDEKIRYKYPNLSCE 83
>SAPS2_HUMAN (O75170) SAPS domain family member 2| Length = 927 Score = 65.9 bits (159), Expect = 4e-11 Identities = 34/84 (40%), Positives = 51/84 (60%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L+ S VD +LDKE+ T I+QECKA N +L++FL + +E+L+ Sbjct: 1 MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVS 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 + ++ P D E+K FK+P ACE Sbjct: 60 LITQDPPLDMEEKVRFKYPNTACE 83
>SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A| Length = 852 Score = 65.9 bits (159), Expect = 4e-11 Identities = 30/84 (35%), Positives = 51/84 (60%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L ++S +DT+L+++ T I+QECKA N +L+ FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVT 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 ++ EE P D ++K +K+P ++CE Sbjct: 60 FITEEPPQDMDEKIRYKYPNLSCE 83
>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1| Length = 881 Score = 64.7 bits (156), Expect = 1e-10 Identities = 27/84 (32%), Positives = 52/84 (61%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L +S +DT+L++E+ + ++QECK +N +L++FL ++ ++ Sbjct: 1 MFWKFD-LHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVA 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 +V +E PD E++ +K+P +ACE Sbjct: 60 WVTQEPPDSGEERLRYKYPSVACE 83
>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1| Length = 856 Score = 63.5 bits (153), Expect = 2e-10 Identities = 27/84 (32%), Positives = 52/84 (61%) Frame = +1 Query: 190 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLR 369 MFW+ L +S +DT+L+KE+ + ++QECK +N +L++FL + ++ ++ Sbjct: 1 MFWKFD-LHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVA 59 Query: 370 YVVEEVPDDAEKKRSFKFPFIACE 441 +V +E P E++ +K+P +ACE Sbjct: 60 WVTQEPPASGEERLRYKYPSVACE 83
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 33.9 bits (76), Expect = 0.18 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Frame = -1 Query: 227 GEAAERPVMRQNMVAAAVDLG------FPAPGGASPRPNPRESGRRRPDWATGEGGWIGR 66 G+ A RP AA G P+PG PRPNP +R P GG GR Sbjct: 217 GQGAPRPGATPGPRPAAAQGGPRPGGPRPSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGR 276 Query: 65 --GASGSNWDRGG 33 GA G+ GG Sbjct: 277 PGGAPGAGRPGGG 289
>SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Transcriptional| corepressor Sin3b) (Histone deacetylase complex subunit Sin3b) Length = 1162 Score = 32.0 bits (71), Expect = 0.70 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 92 TGEGGWIGRGASGSNWDRGG*EAHER 15 +G GG GRG SG+ W R G HE+ Sbjct: 11 SGAGGPAGRGLSGARWGRSGSAGHEK 36
>ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related protein 71)| Length = 335 Score = 31.6 bits (70), Expect = 0.91 Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 18/69 (26%) Frame = -1 Query: 161 PAPGGASPRP----------NPRESGRRRPDWATGEGGW------IGRGASGSN-WDRG- 36 PAP G SP P NP S P W+ W G SG+ WD G Sbjct: 105 PAPPGTSPSPFVGFEGATGQNPATSAGGVPSWSHPPAAWSTTSWDCSVGPSGATYWDNGL 164 Query: 35 G*EAHERRK 9 G EAHE K Sbjct: 165 GGEAHEDYK 173
>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4| Length = 376 Score = 31.2 bits (69), Expect = 1.2 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -1 Query: 227 GEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESG 114 G +A P N ++ + G PAPG ++ PNP +G Sbjct: 31 GSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAG 68
>SIN3B_MOUSE (Q62141) Paired amphipathic helix protein Sin3b (Transcriptional| corepressor Sin3b) (Histone deacetylase complex subunit Sin3b) Length = 1098 Score = 31.2 bits (69), Expect = 1.2 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 Query: 89 GEGGWIGRGASGSNWDRGG*EAHER 15 G GG GRG GS W R G HE+ Sbjct: 5 GSGGSAGRGFGGSRWGRSGSGGHEK 29
>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)| Length = 315 Score = 31.2 bits (69), Expect = 1.2 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = -1 Query: 206 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG-SNWDRGG* 30 +++Q A D G P PG P P E G R P W G I R + W + Sbjct: 1 MVQQRGARAKRDGGPPPPG-----PGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52 Query: 29 EAHERRK 9 HERRK Sbjct: 53 --HERRK 57
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 136 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 228 RG A PGAG R+ AA + W L A+P Sbjct: 34 RGPAAPGAGGARAALAAALLWATWALLLAAP 64
>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) (Glycoprotein B) Length = 932 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 136 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 228 RG A PGAG R+ AA + W L A+P Sbjct: 34 RGPAAPGAGGARAALAAALLWATWALLLAAP 64
>SCRT1_MOUSE (Q99M85) Transcriptional repressor scratch 1 (Scratch homolog 1| zinc finger protein) (Scratch 1) (SCRT) (mScrt) Length = 348 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -1 Query: 191 MVAAAV--DLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 51 M AAAV +LG PA G++P P P RP+ AT GG+I A+ S Sbjct: 68 MYAAAVRGELG-PAASGSAPPPTP------RPELATAAGGYINGDAAVS 109
>SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratch homolog 1| zinc finger protein) (Scratch 1) (SCRT) (hScrt) Length = 348 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -1 Query: 191 MVAAAV--DLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 51 M AAAV +LG PA G++P P P RP+ AT GG+I A+ S Sbjct: 68 MYAAAVRGELG-PAAAGSAPPPTP------RPELATAAGGYINGDAAVS 109
>HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)| Length = 336 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = -1 Query: 194 NMVAAAVDLGFPAPGG--ASPRPNPRESGRRRPDWATGE 84 N +AA ++ GG A+PRP PR++G ++P G+ Sbjct: 268 NRIAALQEMAQQMAGGTQAAPRPTPRQAGEQQPSGPWGQ 306
>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)| (Proline-rich synapse-associated protein 2) (ProSAP2) (Fragment) Length = 797 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -1 Query: 182 AAVDLGFPAPGGAS--PRPNPRESGRRRP--DWATGEGGWIGRGASGSNWDRGG*EAHER 15 AA+ +G P PGG S P+P G R D+ G+G + G G DR ER Sbjct: 33 AALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGAGDGPGLAFGGPGPAKDR---RLEER 89 Query: 14 RK 9 R+ Sbjct: 90 RR 91
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = -1 Query: 167 GFPAPGGASPRPNPRESGR-------RRPDWATGEGGWIGRGASGSNWDRGG*EAHERR 12 G PGG P + R+SGR RPD+ G+GG G G + GG + +RR Sbjct: 12 GRDGPGGRGPGNDRRDSGRSFGDRRPERPDFKRGDGG-RGFGDRRGSGPPGGPDRGDRR 69
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 12/48 (25%) Frame = -1 Query: 140 PRPNPRES------------GRRRPDWATGEGGWIGRGASGSNWDRGG 33 PRP PR S G RP ++ GG GRG G RGG Sbjct: 243 PRPGPRPSPMNMPASRPTPPGGARPSTSSRSGGGRGRGGGGGAGPRGG 290
>MYOB_DICDI (P34092) Myosin IB heavy chain| Length = 1111 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -1 Query: 152 GGASPRPNPRESGRRRPDWATGEGGWIGRGA 60 GGA P P P++ G RP A +GG +GA Sbjct: 975 GGARPMPQPQQGGGARPMGAPQQGGAPQQGA 1005
>CCA_AERPE (Q9YB04) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA| nucleotidyltransferase) (tRNA adenylyl-/cytidylyl- transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT) Length = 435 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 164 FPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG 54 +P G P P RE R + GEGGW+ G G Sbjct: 330 YPIEGRLGPPPWERERAARFTEKRLGEGGWVWIGDDG 366
>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis| thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/47 (34%), Positives = 19/47 (40%) Frame = -1 Query: 167 GFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDRGG*E 27 G P+PGG S P G P G GG +G G + G E Sbjct: 404 GSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGGKSGKSGEE 450
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 167 GFPA-PGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDR 39 GFP PGG P+ + E+G + GE G G S N DR Sbjct: 1901 GFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDR 1944
>US02_EHV1B (P28964) Gene 68 protein| Length = 418 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Frame = -1 Query: 212 RPVMRQNMVAAAVDLG----FPAPGGASPRPNPRESGRRRPDWA 93 RP + ++ A VD PAPG PR P E G RP+ A Sbjct: 210 RPPTVKRVIYAVVDPARLREIPAPGRPLPRRRPSEGGDARPEAA 253
>TOP3B_MOUSE (Q9Z321) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (DNA| topoisomerase III beta-1) Length = 862 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 Query: 97 QSGRRRPDSRGFGRGLAPPGAGNPR 171 + G R RG GRG PPG NPR Sbjct: 824 RGGPGRRQGRGRGRGRRPPGKPNPR 848
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 170 LGFPAPGGASPRP-NPRESGRRRPDWATGEGGWIGR-GASG 54 +GFP P GA+ P P E G P A G G G GA G Sbjct: 569 MGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQG 609
>RP54_XANCV (P77998) RNA polymerase sigma-54 factor| Length = 479 Score = 28.9 bits (63), Expect = 5.9 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = -1 Query: 182 AAVDLGFPAPGGASPRPNPRES---GRRRPDWATGEGGWIGRGASGSNWDRGG*EAHER 15 AA D+ + AS RE R DW+ E W G G+ GS D +A ER Sbjct: 56 AASDIAVDSSPSASTEQPQREEVAPAERDEDWSQDELQWTGSGSGGSFDDDESGDAAER 114
>CI066_HUMAN (Q5T8R8) Protein C9orf66| Length = 295 Score = 28.9 bits (63), Expect = 5.9 Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -1 Query: 221 AAERPVMRQNMV--AAAVDLGFPAPGGASPRPNPR---ESGR-RRPDWATGEGGWIGRGA 60 AAE N+V +A FP SPR R GR R P W G GG GRG Sbjct: 165 AAEHAQPSANLVCRSALETSAFPPSKPKSPRGRVRARSSDGRLRHPAWRAGSGGRGGRGP 224 Query: 59 S 57 S Sbjct: 225 S 225
>SOX12_MOUSE (Q04890) SOX-12 protein| Length = 314 Score = 28.9 bits (63), Expect = 5.9 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = -1 Query: 206 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG-SNWDRGG* 30 +++Q A D G P PG P P G R P W G I R + W + Sbjct: 1 MVQQRGARAKRDGGPPPPG-----PGPAAEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52 Query: 29 EAHERRK 9 HERRK Sbjct: 53 --HERRK 57
>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase| III alpha) Length = 1250 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Frame = -1 Query: 152 GGASPRPNPRESGRRRPDWATGEGGWI---GRGASGSNWDRGG 33 GG P P P G R G GGW G G SG GG Sbjct: 771 GGGGPGPGPGGGGSGR---GAGSGGWSSGPGGGGSGGGGGSGG 810
>MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (MCH receptor 1)| (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein coupled receptor 24) (Fragment) Length = 388 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%) Frame = -1 Query: 128 PRESGRR----RPDWATGEGGWIGRGASGSNW 45 P + GRR +P W G W+ A+G+ W Sbjct: 4 PGQGGRRWRLPQPAWVEGSSAWLWEPATGTGW 35
>APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydrolase aps1 (EC| 3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase) (EC 3.6.1.-) (Ap6A hydrolase) Length = 210 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%) Frame = -1 Query: 119 SGRRRPDWATGEGGW-----IGRGASGSNWDRGG*EAHERR 12 S ++ P W +GGW + + A W+ GG H R Sbjct: 62 SAKKHPSWVVPKGGWEADESVQQAALREGWEEGGLVGHITR 102
>UL34_EBV (P03185) Protein BFRF1| Length = 336 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/33 (39%), Positives = 13/33 (39%) Frame = -1 Query: 173 DLGFPAPGGASPRPNPRESGRRRPDWATGEGGW 75 D G GG PRP SG G GGW Sbjct: 199 DTGARVTGGGGPRPGVTHSGCLGDSHVRGRGGW 231
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = -1 Query: 167 GFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 51 G PAPGGA+PR GR P G GG G G G+ Sbjct: 1099 GMPAPGGAAPR------GRGAP--PPGAGGPPGGGRGGA 1129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,313,132 Number of Sequences: 219361 Number of extensions: 918851 Number of successful extensions: 3787 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3431 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3771 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
