ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl41a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predic... 266 6e-68
2dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
3dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
4ref|XM_476020.1| Oryza sativa (japonica cultivar-group), predic... 192 7e-46
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
6dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
7gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
9ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 ... 66 1e-07
10gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1... 66 1e-07
11ref|XM_473921.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
12dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
13ref|NM_128396.1| Arabidopsis thaliana unknown protein AT2G28360 ... 56 1e-04
14emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
15gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) ... 56 1e-04
16gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 56 1e-04
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.38
20emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 44 0.38
21ref|XM_811829.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
22emb|CR722411.2|CNS0GKCX Tetraodon nigroviridis full-length cDNA 42 1.5
23emb|BX629355.3|CNS09SBR Tetraodon nigroviridis 42 1.5
24emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005... 42 1.5
25ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 ... 40 6.0
26gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
27gb|BC074599.1| Xenopus tropicalis MGC69468 protein, mRNA (cDNA c... 40 6.0
28gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, com... 40 6.0
29gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, co... 40 6.0
30gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
31gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete se... 40 6.0
32emb|BX682239.3| Human DNA sequence from clone WI2-80732C2 on chr... 40 6.0
33ref|XM_965216.1| PREDICTED: Tribolium castaneum similar to CG146... 40 6.0
34emb|BX058202.1|CNS09H2M Single read from an extremity of a full-... 40 6.0
35emb|BX058201.1|CNS09H2L Single read from an extremity of a full-... 40 6.0
36emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 6.0
37gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, comp... 40 6.0
38gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 6.0
39dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.0
40ref|NM_171274.2| Caenorhabditis elegans K08D12.3b (K08D12.3) mRN... 40 6.0
41ref|NM_171273.2| Caenorhabditis elegans K08D12.3a (K08D12.3) mRN... 40 6.0
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
43gb|AF262336.1|AF262336 Danio rerio beta-spectrin (sptb) mRNA, co... 40 6.0
44ref|NM_001004819.1| Xenopus tropicalis MGC69468 protein (MGC6946... 40 6.0
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.0
46gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, comp... 40 6.0
47gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 6.0
48gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana... 40 6.0
49dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.0
50dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
51dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
52dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
53emb|CR761302.2| Xenopus tropicalis finished cDNA, clone TEgg050d11 40 6.0
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.0
55ref|NM_131525.1| Danio rerio spectrin, beta, erythrocytic (sptb)... 40 6.0
56gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, ... 40 6.0
57gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0 
>ref|NM_192531.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score =  266 bits (134), Expect = 6e-68
 Identities = 193/215 (89%)
 Strand = Plus / Plus

                                                                       
Query: 229 gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
           ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 172 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 231

                                                                       
Query: 289 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcc 348
           |||||||||||||||||||| ||||| || ||||||||||||||| |||||||||  |||
Sbjct: 232 attattcaagagtgcaaagctctgaatacacgactcataaatttcttgcgtgacagagcc 291

                                                                       
Query: 349 caggtcgaacaattgcttcgttatgttgttgaagaagttccggatgatgctgnnnnnnng 408
           ||||| || |||||||||||||||||||| |||||||| || ||||||||||       |
Sbjct: 292 caggtggagcaattgcttcgttatgttgtggaagaagtaccagatgatgctgaaaaaaag 351

                                              
Query: 409 cgctctttcaagttccctttcattgcttgtgagat 443
           |||||||||||||| || |||||||||||||||||
Sbjct: 352 cgctctttcaagtttccattcattgcttgtgagat 386



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 190 atgttttggcgcatgaccggtctctccgcggcctcgcccgt 230
           ||||| |||||||||||||| || |||||||||||||||||
Sbjct: 1   atgttctggcgcatgaccggcctgtccgcggcctcgcccgt 41
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>dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full
           insert sequence
          Length = 3155

 Score =  202 bits (102), Expect = 7e-49
 Identities = 224/267 (83%)
 Strand = Plus / Plus

                                                                       
Query: 177 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtggatac 236
           ||||| |||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 211 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgccggtggatac 270

                                                                       
Query: 237 aatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattca 296
           ||| ||||||||||| || || ||| | |||||||| ||||||||||||||||| |||||
Sbjct: 271 aattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaaataattca 330

                                                                       
Query: 297 agagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcccaggtcga 356
            ||||||||||| ||||| || || |||||||||||| |||| |||||||| || || ||
Sbjct: 331 ggagtgcaaagcgctgaatactcgtctcataaatttcttgcgagacaaggctcaagtgga 390

                                                                       
Query: 357 acaattgcttcgttatgttgttgaagaagttccggatgatgctgnnnnnnngcgctcttt 416
            ||||||||||||||  | || |||||||| || || ||| |||        || |||||
Sbjct: 391 gcaattgcttcgttacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttt 450

                                      
Query: 417 caagttccctttcattgcttgtgagat 443
            |||||||| |||||||||||||||||
Sbjct: 451 taagttcccattcattgcttgtgagat 477
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>dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039C12, full
           insert sequence
          Length = 2733

 Score =  202 bits (102), Expect = 7e-49
 Identities = 224/267 (83%)
 Strand = Plus / Plus

                                                                       
Query: 177 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtggatac 236
           ||||| |||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 198 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgccggtggatac 257

                                                                       
Query: 237 aatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattca 296
           ||| ||||||||||| || || ||| | |||||||| ||||||||||||||||| |||||
Sbjct: 258 aattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaaataattca 317

                                                                       
Query: 297 agagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcccaggtcga 356
            ||||||||||| ||||| || || |||||||||||| |||| |||||||| || || ||
Sbjct: 318 ggagtgcaaagcgctgaatactcgtctcataaatttcttgcgagacaaggctcaagtgga 377

                                                                       
Query: 357 acaattgcttcgttatgttgttgaagaagttccggatgatgctgnnnnnnngcgctcttt 416
            ||||||||||||||  | || |||||||| || || ||| |||        || |||||
Sbjct: 378 gcaattgcttcgttacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttt 437

                                      
Query: 417 caagttccctttcattgcttgtgagat 443
            |||||||| |||||||||||||||||
Sbjct: 438 taagttcccattcattgcttgtgagat 464
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>ref|XM_476020.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2313

 Score =  192 bits (97), Expect = 7e-46
 Identities = 213/254 (83%)
 Strand = Plus / Plus

                                                                       
Query: 190 atgttttggcgcatgaccggtctctccgcggcctcgcccgtggatacaatcctagacaag 249
           ||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1   atgttctggcgcatgactggtctctccgcggcctcgccggtggatacaattctagacaag 60

                                                                       
Query: 250 gaaaattttacacttgaagaactccttgacgaggatgaaattattcaagagtgcaaagca 309
           || || || ||| | |||||||| ||||||||||||||||| ||||| ||||||||||| 
Sbjct: 61  gagaacttcacattagaagaacttcttgacgaggatgaaataattcaggagtgcaaagcg 120

                                                                       
Query: 310 ctgaacacccgactcataaatttcctgcgtgacaaggcccaggtcgaacaattgcttcgt 369
           ||||| || || |||||||||||| |||| |||||||| || || || ||||||||||||
Sbjct: 121 ctgaatactcgtctcataaatttcttgcgagacaaggctcaagtggagcaattgcttcgt 180

                                                                       
Query: 370 tatgttgttgaagaagttccggatgatgctgnnnnnnngcgctctttcaagttccctttc 429
           ||  | || |||||||| || || ||| |||        || ||||| |||||||| |||
Sbjct: 181 tacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttttaagttcccattc 240

                         
Query: 430 attgcttgtgagat 443
           ||||||||||||||
Sbjct: 241 attgcttgtgagat 254
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  167 bits (84), Expect = 4e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                            
Query: 229      gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
                ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 22772327 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 22772386

                                                            
Query: 289      attattcaagagtgcaaagcactgaacacccgactcataaattt 332
                |||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 22772387 attattcaagagtgcaaagctctgaatacacgactcataaattt 22772430



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 69/78 (88%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                            
Query: 157      gccggaaaccctagatccaccgccgcc---gccaccatgttttggcgcatgaccggtctc 213
                |||||||||||||||||| || |||||   ||| ||||||| |||||||||||||| || 
Sbjct: 22771392 gccggaaaccctagatccgcctccgcctccgccgccatgttctggcgcatgaccggcctg 22771451

                                  
Query: 214      tccgcggcctcgcccgtg 231
                ||||||||||||||||||
Sbjct: 22771452 tccgcggcctcgcccgtg 22771469



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 335      tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgttgaagaagttccggatg 394
                |||||||||  |||||||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 22773045 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgtggaagaagtaccagatg 22773104

                                           
Query: 395      atgctgnnnnnnngcgctctttcaagt 421
                ||||||       ||||||||||||||
Sbjct: 22773105 atgctgaaaaaaagcgctctttcaagt 22773131



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 6        ttttttcctcctctcgtgcgcctc 29
                |||| |||||||||||||||||||
Sbjct: 22771192 ttttctcctcctctcgtgcgcctc 22771215
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score =  167 bits (84), Expect = 4e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                         
Query: 229   gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
             ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 89716 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 89775

                                                         
Query: 289   attattcaagagtgcaaagcactgaacacccgactcataaattt 332
             |||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 89776 attattcaagagtgcaaagctctgaatacacgactcataaattt 89819



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 69/78 (88%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                         
Query: 157   gccggaaaccctagatccaccgccgcc---gccaccatgttttggcgcatgaccggtctc 213
             |||||||||||||||||| || |||||   ||| ||||||| |||||||||||||| || 
Sbjct: 88781 gccggaaaccctagatccgcctccgcctccgccgccatgttctggcgcatgaccggcctg 88840

                               
Query: 214   tccgcggcctcgcccgtg 231
             ||||||||||||||||||
Sbjct: 88841 tccgcggcctcgcccgtg 88858



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                         
Query: 335   tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgttgaagaagttccggatg 394
             |||||||||  |||||||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 90434 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgtggaagaagtaccagatg 90493

                                        
Query: 395   atgctgnnnnnnngcgctctttcaagt 421
             ||||||       ||||||||||||||
Sbjct: 90494 atgctgaaaaaaagcgctctttcaagt 90520



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ttttttcctcctctcgtgcgcctc 29
             |||| |||||||||||||||||||
Sbjct: 88581 ttttctcctcctctcgtgcgcctc 88604
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                         
Query: 229   gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
             ||||||||||| ||||||||||| || || ||| | |||||||| |||||||||||||||
Sbjct: 79883 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 79942

                                                         
Query: 289   attattcaagagtgcaaagcactgaacacccgactcataaattt 332
             || ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 79943 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 79986



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 177   cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 227
             ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 78773 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 78823



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 420   gttccctttcattgcttgtgagat 443
             |||||| |||||||||||||||||
Sbjct: 80528 gttcccattcattgcttgtgagat 80551
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                            
Query: 229      gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
                ||||||||||| ||||||||||| || || ||| | |||||||| |||||||||||||||
Sbjct: 29301226 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 29301285

                                                            
Query: 289      attattcaagagtgcaaagcactgaacacccgactcataaattt 332
                || ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 29301286 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 29301329



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 177      cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 227
                ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 29300116 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 29300166



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 420      gttccctttcattgcttgtgagat 443
                |||||| |||||||||||||||||
Sbjct: 29301871 gttcccattcattgcttgtgagat 29301894



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      tagatccaccgccgccgcca 187
                ||||||||||||||||||||
Sbjct: 16893016 tagatccaccgccgccgcca 16892997



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     ccaccgccgccgccaccatg 192
               ||||||||||||||||||||
Sbjct: 5284616 ccaccgccgccgccaccatg 5284635
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>ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 mRNA, complete cds
          Length = 2939

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 274 cttgacgaggatgaaattattcaagagtgcaaagcactgaa 314
           |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 337 cttgacgaggatgaaattattcaagaatgcaaagccctgaa 377
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>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
             sequence
          Length = 75799

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                      
Query: 274   cttgacgaggatgaaattattcaagagtgcaaagcactgaa 314
             |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 31062 cttgacgaggatgaaattattcaagaatgcaaagccctgaa 31102
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>ref|XM_473921.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 229 gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
           |||||||| ||  |||||||||||||||| |   | || || || ||||| |||||||||
Sbjct: 40  gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 99

                                                                   
Query: 289 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 344
           || || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 100 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 155
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>dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full
           insert sequence
          Length = 2332

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 229 gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
           |||||||| ||  |||||||||||||||| |   | || || || ||||| |||||||||
Sbjct: 388 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 447

                                                                   
Query: 289 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 344
           || || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 448 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 503
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>ref|NM_128396.1| Arabidopsis thaliana unknown protein AT2G28360 mRNA, complete cds
          Length = 2481

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 265 gaagaactccttgacgaggatgaaattattcaagagtgcaaagcactgaacacccgactc 324
           ||||| || ||||||||||| || ||||||||||| ||||||||  |||| | |||||||
Sbjct: 229 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 288

                   
Query: 325 ataaattt 332
           || |||||
Sbjct: 289 attaattt 296
to top
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                          
Query: 229    gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
              |||||||| ||  |||||||||||||||| |   | || || || ||||| |||||||||
Sbjct: 145165 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 145224

                                              
Query: 289    attattcaagagtgcaaagcactgaacacccg 320
              || || || |||||||||||||| ||||||||
Sbjct: 145225 ataatccaggagtgcaaagcactaaacacccg 145256
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>gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) mRNA, complete cds
          Length = 3033

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 265 gaagaactccttgacgaggatgaaattattcaagagtgcaaagcactgaacacccgactc 324
           ||||| || ||||||||||| || ||||||||||| ||||||||  |||| | |||||||
Sbjct: 266 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 325

                   
Query: 325 ataaattt 332
           || |||||
Sbjct: 326 attaattt 333
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>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
             sequence
          Length = 93122

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 265   gaagaactccttgacgaggatgaaattattcaagagtgcaaagcactgaacacccgactc 324
             ||||| || ||||||||||| || ||||||||||| ||||||||  |||| | |||||||
Sbjct: 40953 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 41012

                     
Query: 325   ataaattt 332
             || |||||
Sbjct: 41013 attaattt 41020
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                            
Query: 229      gtggatacaatcctagacaaggaaaattttacacttgaagaactccttgacgaggatgaa 288
                |||||||| ||  |||||||||||||||| |   | || || || ||||| |||||||||
Sbjct: 31567482 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 31567541

                                                
Query: 289      attattcaagagtgcaaagcactgaacacccg 320
                || || || |||||||||||||| ||||||||
Sbjct: 31567542 ataatccaggagtgcaaagcactaaacacccg 31567573
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 167      ctagatccaccgccgccgccac 188
                ||||||||||||||||||||||
Sbjct: 19118826 ctagatccaccgccgccgccac 19118805



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     agatccaccgccgccgccacc 189
               |||||||||||||||||||||
Sbjct: 8049192 agatccaccgccgccgccacc 8049172
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 167      ctagatccaccgccgccgccac 188
                ||||||||||||||||||||||
Sbjct: 19045053 ctagatccaccgccgccgccac 19045032



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     agatccaccgccgccgccacc 189
               |||||||||||||||||||||
Sbjct: 8049073 agatccaccgccgccgccacc 8049053
to top
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127026

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 167    ctagatccaccgccgccgccac 188
              ||||||||||||||||||||||
Sbjct: 107153 ctagatccaccgccgccgccac 107174
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>ref|XM_811829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509693.130) partial mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 169 agatccaccgccgccgccacc 189
           |||||||||||||||||||||
Sbjct: 744 agatccaccgccgccgccacc 764
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>emb|CR722411.2|CNS0GKCX Tetraodon nigroviridis full-length cDNA
          Length = 410

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 173 ccaccgccgccgccaccatgt 193
           |||||||||||||||||||||
Sbjct: 17  ccaccgccgccgccaccatgt 37
to top
>emb|BX629355.3|CNS09SBR Tetraodon nigroviridis
          Length = 128373

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   ccaccgccgccgccaccatgt 193
             |||||||||||||||||||||
Sbjct: 72803 ccaccgccgccgccaccatgt 72783
to top
>emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151117

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   agatccaccgccgccgccacc 189
             |||||||||||||||||||||
Sbjct: 94486 agatccaccgccgccgccacc 94506
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>ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 mRNA, complete cds
          Length = 2904

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 242 tagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattcaagagt 301
           ||||||| |||||||| ||  | ||||| || ||||| ||||| || ||||||||||| |
Sbjct: 308 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 367

               
Query: 302 gcaa 305
           ||||
Sbjct: 368 gcaa 371
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>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06,
              complete sequence
          Length = 143130

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    tagatccaccgccgccgcca 187
              ||||||||||||||||||||
Sbjct: 105502 tagatccaccgccgccgcca 105483
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>gb|BC074599.1| Xenopus tropicalis MGC69468 protein, mRNA (cDNA clone MGC:69468
           IMAGE:5336075), complete cds
          Length = 1425

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ccaccgccgccgccaccatg 192
           ||||||||||||||||||||
Sbjct: 792 ccaccgccgccgccaccatg 773
to top
>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   aaattttacacttgaagaac 271
             ||||||||||||||||||||
Sbjct: 60716 aaattttacacttgaagaac 60697
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>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence
          Length = 153520

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ccaccgccgccgccaccatg 192
             ||||||||||||||||||||
Sbjct: 10925 ccaccgccgccgccaccatg 10906
to top
>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009L15, complete sequence
          Length = 137570

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   tagatccaccgccgccgcca 187
             ||||||||||||||||||||
Sbjct: 24059 tagatccaccgccgccgcca 24040
to top
>gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete sequence
          Length = 33673

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   gatccaccgccgccgccacc 189
             ||||||||||||||||||||
Sbjct: 15746 gatccaccgccgccgccacc 15727
to top
>emb|BX682239.3| Human DNA sequence from clone WI2-80732C2 on chromosome X, complete
            sequence
          Length = 12711

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  ttccctttcattgcttgtga 440
            ||||||||||||||||||||
Sbjct: 1190 ttccctttcattgcttgtga 1209
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>ref|XM_965216.1| PREDICTED: Tribolium castaneum similar to CG14622-PC, isoform C
            (LOC658864), mRNA
          Length = 3767

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  tccaccgccgccgccaccat 191
            ||||||||||||||||||||
Sbjct: 1791 tccaccgccgccgccaccat 1810
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>emb|BX058202.1|CNS09H2M Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC38BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 328

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 176 ccgccgccgccaccatgttttggc 199
           ||||||||||||||||||| ||||
Sbjct: 271 ccgccgccgccaccatgttctggc 294
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>emb|BX058201.1|CNS09H2L Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC38BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 957

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 ccgccgccgccaccatgttttggc 199
           ||||||||||||||||||| ||||
Sbjct: 745 ccgccgccgccaccatgttctggc 722
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 264    tgaagaactccttgacgaggatgaaattattcaaga 299
              |||| ||||||||||  ||||| |||||||||||||
Sbjct: 281272 tgaaaaactccttgatcaggatcaaattattcaaga 281307
to top
>gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, complete cds
          Length = 2905

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 242 tagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattcaagagt 301
           ||||||| |||||||| ||  | ||||| || ||||| ||||| || ||||||||||| |
Sbjct: 308 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 367

               
Query: 302 gcaa 305
           ||||
Sbjct: 368 gcaa 371
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>gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase 7 (HXK7) mRNA,
           complete cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ccaccgccgccgccaccatg 192
           ||||||||||||||||||||
Sbjct: 111 ccaccgccgccgccaccatg 92
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      atccggccgccgccgcccgg 118
               ||||||||||||||||||||
Sbjct: 2015886 atccggccgccgccgcccgg 2015867



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     cggccgccgccgcccggatt 121
               ||||||||||||||||||||
Sbjct: 1120760 cggccgccgccgcccggatt 1120741
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>ref|NM_171274.2| Caenorhabditis elegans K08D12.3b (K08D12.3) mRNA, complete cds
          Length = 376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 gatccaccgccgccgccacc 189
           ||||||||||||||||||||
Sbjct: 242 gatccaccgccgccgccacc 223
to top
>ref|NM_171273.2| Caenorhabditis elegans K08D12.3a (K08D12.3) mRNA, complete cds
          Length = 672

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 gatccaccgccgccgccacc 189
           ||||||||||||||||||||
Sbjct: 212 gatccaccgccgccgccacc 193
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 102      cggccgccgccgcccggattcgcg 125
                |||||| |||||||||||||||||
Sbjct: 28975145 cggccggcgccgcccggattcgcg 28975168
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>gb|AF262336.1|AF262336 Danio rerio beta-spectrin (sptb) mRNA, complete cds
          Length = 7371

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  aatttcctgcgtgacaaggcccag 351
            ||||||||||||||| ||||||||
Sbjct: 3058 aatttcctgcgtgacgaggcccag 3081
to top
>ref|NM_001004819.1| Xenopus tropicalis MGC69468 protein (MGC69468), mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ccaccgccgccgccaccatg 192
           ||||||||||||||||||||
Sbjct: 792 ccaccgccgccgccaccatg 773
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      atccggccgccgccgcccgg 118
               ||||||||||||||||||||
Sbjct: 2711404 atccggccgccgccgcccgg 2711423
to top
>gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, complete cds
          Length = 2409

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 242 tagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattcaagagt 301
           ||||||| |||||||| ||  | ||||| || ||||| ||||| || ||||||||||| |
Sbjct: 53  tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 112

               
Query: 302 gcaa 305
           ||||
Sbjct: 113 gcaa 116
to top
>gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA,
           complete cds
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ccaccgccgccgccaccatg 192
           ||||||||||||||||||||
Sbjct: 101 ccaccgccgccgccaccatg 82
to top
>gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana BAC T6D22 from chromosome I,
             complete sequence
          Length = 120965

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 242   tagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattcaagagt 301
             ||||||| |||||||| ||  | ||||| || ||||| ||||| || ||||||||||| |
Sbjct: 33584 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 33643

                 
Query: 302   gcaa 305
             ||||
Sbjct: 33644 gcaa 33647
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      ccaatccggccgccgccgcc 115
               ||||||||||||||||||||
Sbjct: 2495246 ccaatccggccgccgccgcc 2495265
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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0724B10
          Length = 169143

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   cggccgccgccgcccggattcgcg 125
             |||||| |||||||||||||||||
Sbjct: 21310 cggccggcgccgcccggattcgcg 21333
to top
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   cggccgccgccgcccggattcgcg 125
             |||||| |||||||||||||||||
Sbjct: 58203 cggccggcgccgcccggattcgcg 58226
to top
>dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D05, full
           insert sequence
          Length = 1777

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ccaccgccgccgccaccatg 192
           ||||||||||||||||||||
Sbjct: 147 ccaccgccgccgccaccatg 128
to top
>emb|CR761302.2| Xenopus tropicalis finished cDNA, clone TEgg050d11
          Length = 1306

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ccaccgccgccgccaccatg 192
           ||||||||||||||||||||
Sbjct: 723 ccaccgccgccgccaccatg 704
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    agatccaccgccgccgccac 188
              ||||||||||||||||||||
Sbjct: 380562 agatccaccgccgccgccac 380543
to top
>ref|NM_131525.1| Danio rerio spectrin, beta, erythrocytic (sptb), mRNA
          Length = 7371

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 328  aatttcctgcgtgacaaggcccag 351
            ||||||||||||||| ||||||||
Sbjct: 3058 aatttcctgcgtgacgaggcccag 3081
to top
>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4,
             AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes,
             partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1),
             EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13
             genes, complete cds
          Length = 63093

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 242   tagacaaggaaaattttacacttgaagaactccttgacgaggatgaaattattcaagagt 301
             ||||||| |||||||| ||  | ||||| || ||||| ||||| || ||||||||||| |
Sbjct: 62156 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 62215

                 
Query: 302   gcaa 305
             ||||
Sbjct: 62216 gcaa 62219
to top
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   ccaccgccgccgccaccatg 192
             ||||||||||||||||||||
Sbjct: 21317 ccaccgccgccgccaccatg 21336


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,976,091
Number of Sequences: 3902068
Number of extensions: 3976091
Number of successful extensions: 115330
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113226
Number of HSP's gapped (non-prelim): 2101
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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