>RAI1_MOUSE (Q61818) Retinoic acid-induced protein 1|
          Length = 1889

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
 Frame = -2

Query: 442  PSRRRSEPDGLGAAHQSPKEHHGNRRSEQEKLGWILQSPN--------QTQNSPAELEID 287
            P  R S   G G  + S     G ++ + E+LG   Q P         + Q  P +    
Sbjct: 1446 PHDRASSTQGGGEDNSSG----GGKKPKTEELGPASQPPEGRPCQPQTRAQKQPGQASYS 1501

Query: 286  RYSTRIGAT*GRGTSAHRRDKKRYQSARRR 197
             YS R   + GRG +AH    K   + RR+
Sbjct: 1502 SYSKRKRLSRGRGKTAHASPCKGRATRRRQ 1531

>MUS81_MOUSE (Q91ZJ0) Crossover junction endonuclease MUS81 (EC 3.1.22.-)|
          Length = 551

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
 Frame = -2

Query: 439 SRRRSEPDGLGAAHQS--PKEHHGNRRSEQEKLGWILQSPNQTQNSPAELEIDRY----S 278
           +++ +E +GL   H    P+EHHG   +  E L     +    Q  P EL    Y     
Sbjct: 213 AQKLAEAEGLSTRHAGFRPEEHHGEDSAVPEALSEPGTTEGAVQQRPLELRPSEYRVLLC 272

Query: 277 TRIGAT*GRGTSAHRRDKKR 218
             IG T G G   HR +  R
Sbjct: 273 VDIGETRGAG---HRLEMLR 289

>HAND1_SHEEP (Q28555) Heart- and neural crest derivatives-expressed protein 1|
           (Extraembryonic tissues, heart, autonomic nervous system
           and neural crest derivatives-expressed protein 1)
           (eHAND)
          Length = 204

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 278 HAYRSYMRTWNLSSPP**EEVPVGTTPPGSRLRSAAA 168
           H  R Y ++W LS      + P G  PP + +R+AAA
Sbjct: 40  HQERPYFQSWLLSPADAAPDFPAGGPPPTTAVRAAAA 76

>ACCD_ADICA (Q85FL3) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 310

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 289 RFQVPPGSSAFDSAIEGSILVFLVPTGDFRGVLLAIDGL 405
           R ++P G  A +S  +  +L  +VP    +GVL  I GL
Sbjct: 263 RQKIPDGFQAAESLFDNGLLDLIVPRNLLKGVLSEISGL 301

>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)|
           (EBNA-6) (EBNA-3C) (EBNA-4B)
          Length = 992

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
 Frame = -1

Query: 386 RTPRKSPVGTRKT------------RMDPSIAESNAELPGGT*NRSIQ----HAYRSYMR 255
           + PRK P  T KT            R D + A+S  E PG +   S+     H     M 
Sbjct: 414 KKPRKLPWPTPKTHPVKRTNVKTSDRSDKAEAQSTPERPGPSEQSSVTVEPAHPTPVEMP 473

Query: 254 TWNLSSPP**EE-VPVGTTPPGSRLRSAAADV 162
              L  PP   + VPV  TPP SR R  A  V
Sbjct: 474 MVILHQPPPVPKPVPVKPTPPPSRRRRGACVV 505


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,612,849
Number of Sequences: 219361
Number of extensions: 898700
Number of successful extensions: 2815
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2815
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)