>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206425

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 6      tcctcctcctcctgacgctgct 27
              ||||||||||||||||||||||
Sbjct: 193788 tcctcctcctcctgacgctgct 193809

>ref|XM_468528.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 372

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 5   ttcctcctcctcctgacgctgctcc 29
           ||||||||||||||| |||||||||
Sbjct: 212 ttcctcctcctcctgccgctgctcc 236

>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 6      tcctcctcctcctgacgctgc 26
              |||||||||||||||||||||
Sbjct: 263973 tcctcctcctcctgacgctgc 263993

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 5        ttcctcctcctcctgacgctgctcc 29
                ||||||||||||||| |||||||||
Sbjct: 35691619 ttcctcctcctcctgccgctgctcc 35691643

>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 5     ttcctcctcctcctgacgctgctcc 29
             ||||||||||||||| |||||||||
Sbjct: 52233 ttcctcctcctcctgccgctgctcc 52257

>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence
          Length = 179458

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    aatgggaacaaggatgacag 225
              ||||||||||||||||||||
Sbjct: 134198 aatgggaacaaggatgacag 134217

>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence
          Length = 234717

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   aatgggaacaaggatgacag 225
             ||||||||||||||||||||
Sbjct: 72726 aatgggaacaaggatgacag 72745

>gb|BT017527.1| Zea mays clone EL01N0421G02.c mRNA sequence
          Length = 718

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 6   tcctcctcctcctgacgctgctcc 29
           ||||||||||||||| ||||||||
Sbjct: 247 tcctcctcctcctgatgctgctcc 224

>gb|AC008317.7| Drosophila melanogaster clone BACR08N17, complete sequence
          Length = 169100

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             |||||||||||||| |||||||||
Sbjct: 81229 tcctcctcctcctgccgctgctcc 81252

>gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete sequence
          Length = 162593

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 6      tcctcctcctcctgacgctgctcc 29
              |||||||||||||| |||||||||
Sbjct: 153254 tcctcctcctcctgccgctgctcc 153277

>ref|XM_583126.2| PREDICTED: Bos taurus similar to Sin3 histone deacetylase
           corepressor complex component SDS3, transcript variant 1
           (LOC506646), mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  ttttggcgcctgctccggcc 68
           ||||||||||||||||||||
Sbjct: 137 ttttggcgcctgctccggcc 156

>ref|XM_880373.1| PREDICTED: Bos taurus similar to Sin3 histone deacetylase
           corepressor complex component SDS3, transcript variant 2
           (LOC506646), mRNA
          Length = 1161

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  ttttggcgcctgctccggcc 68
           ||||||||||||||||||||
Sbjct: 137 ttttggcgcctgctccggcc 156

>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence
          Length = 84869

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             ||||||||||||||||||| ||||
Sbjct: 70065 tcctcctcctcctgacgctcctcc 70088



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             ||||||||||||||||||| ||||
Sbjct: 70023 tcctcctcctcctgacgctcctcc 70046

>ref|XM_846139.1| PREDICTED: Canis familiaris similar to 14-3-3 protein sigma
          (Stratifin) (Epithelial cell marker protein 1)
          (LOC608966), mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 7  cctcctcctcctgacgctgc 26
          ||||||||||||||||||||
Sbjct: 28 cctcctcctcctgacgctgc 9

>gb|AC112158.4| Mus musculus BAC clone RP24-116K14 from chromosome 15, complete
             sequence
          Length = 175171

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   aattctgtcagacaatggga 212
             ||||||||||||||||||||
Sbjct: 74393 aattctgtcagacaatggga 74412

>emb|AL390195.10| Human DNA sequence from clone RP11-552M11 on chromosome 1 Contains the
              OVGP1 gene for oviductal glycoprotein 1, 120kDa (mucin 9,
              oviductin), a NEDD8-conjugating enzyme (NCE2) pseudogene, a
              novel gene, the gene for MEP50 protein (MEP50), the ATP5F1
              gene for ATP synthase H+ transporting mitochondrial F0
              complex subunit b isoform 1, novel gene (MGC24133), the 3'
              end of the gene for AD026 protein (AD026), the ADORA3 gene
              for adenosine A3 receptor, the 5' end of the RAP1A gene for
              RAP1A member of RAS oncogene. family and a Cpg island,
              complete sequence
          Length = 153108

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atttttcctcctcctcctga 20
              ||||||||||||||||||||
Sbjct: 101035 atttttcctcctcctcctga 101016

>emb|AL049632.10|HSDJ913G4 Human DNA sequence from clone RP5-913G4 on chromosome 20 Contains part
             of the PLCB1 gene for phospholipase C beta 1
             (phosphoinositide-specific) and a CpG island, complete
             sequence
          Length = 51150

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tttttcctcctcctcctgac 21
             ||||||||||||||||||||
Sbjct: 32524 tttttcctcctcctcctgac 32505

>emb|AJ237815.1|PAD237815 Porcine adenovirus serotype 3 complete genome, strain IAF
          Length = 34094

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             |||||||||||||| |||||||||
Sbjct: 32208 tcctcctcctcctgccgctgctcc 32231

>gb|AC084443.1|AC084443 Caenorhabditis briggsae cosmid CB011L08, complete sequence
          Length = 75137

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tttttcctcctcctcctgac 21
             ||||||||||||||||||||
Sbjct: 48163 tttttcctcctcctcctgac 48182

>gb|AC155307.2| Mus musculus BAC clone RP24-147F17 from 15, complete sequence
          Length = 190527

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aattctgtcagacaatggga 212
              ||||||||||||||||||||
Sbjct: 155352 aattctgtcagacaatggga 155333

>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the complete
              sequence
          Length = 306650

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      tcctcctcctcctgacgctgctcc 29
              |||||||||||||| |||||||||
Sbjct: 216643 tcctcctcctcctgccgctgctcc 216620

>gb|AF083132.1|AF083132 Porcine adenovirus 3 strain 6618, complete genome
          Length = 34094

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             |||||||||||||| |||||||||
Sbjct: 32212 tcctcctcctcctgccgctgctcc 32235

>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete
             sequence
          Length = 200242

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             ||||||||||||||| ||||||||
Sbjct: 53792 tcctcctcctcctgatgctgctcc 53815

>dbj|AB026117.1| Porcine adenovirus 3 DNA, complete genome
          Length = 34094

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     tcctcctcctcctgacgctgctcc 29
             |||||||||||||| |||||||||
Sbjct: 32208 tcctcctcctcctgccgctgctcc 32231


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,656,892
Number of Sequences: 3902068
Number of extensions: 2656892
Number of successful extensions: 108898
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108802
Number of HSP's gapped (non-prelim): 96
length of query: 272
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 250
effective length of database: 17,147,199,772
effective search space: 4286799943000
effective search space used: 4286799943000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)