ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-... 430 e-117
2ref|XM_474061.1| Oryza sativa (japonica cultivar-group), predic... 86 7e-14
3emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 86 7e-14
4emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 86 7e-14
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 86 7e-14
6dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 7e-14
7emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 86 7e-14
8gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome... 50 0.004
9gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome... 50 0.004
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
11dbj|AK108872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.004
13gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.014
14gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.014
15dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.014
16gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.22
17gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 44 0.22
18ref|XM_957977.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.22
19ref|XM_325562.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.22
20gb|AY484967.1|AY484967S1 Homo sapiens type XVIII collagen gene, ... 44 0.22
21ref|NM_130445.1| Homo sapiens collagen, type XVIII, alpha 1 (COL... 44 0.22
22gb|AY328853.1| Vibrio parahaemolyticus phage VP16C, partial sequ... 44 0.22
23gb|BC063833.1| Homo sapiens collagen, type XVIII, alpha 1, trans... 44 0.22
24dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.22
25dbj|AK130835.1| Homo sapiens cDNA FLJ27325 fis, clone TMS08226, ... 44 0.22
26emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 44 0.22
27gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.22
28gb|AF018082.1|AF018082 Homo sapiens type XVIII collagen (COL18A1... 44 0.22
29emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid L... 44 0.22
30emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on ch... 44 0.22
31ref|XM_471136.1| Oryza sativa (japonica cultivar-group), predic... 42 0.88
32gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 0.88
33gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.88
34emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4,... 42 0.88
35emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4,... 42 0.88
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.88
37dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.88
38dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 0.88
39dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.88
40gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 42 0.88
41dbj|AK064899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.88
42dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 0.88
43gb|U46071.1|RCU46071 Rhodobacter capsulatus cytochrome c biogene... 42 0.88
44dbj|AB015725.1| Aeromonas caviae gene for aminopeptidase, comple... 42 0.88
45ref|XM_523965.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 3.5
46ref|XM_475945.1| Oryza sativa (japonica cultivar-group), predic... 40 3.5
47ref|XM_466579.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.5
48gb|DQ213429.1| Taeniopygia guttata clone 0058P0001G10 tetratrico... 40 3.5
49ref|XM_463882.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.5
50gb|AY599248.1| Homo sapiens downstream of tyrosine kinase 6 (DOK... 40 3.5
51ref|XM_869638.1| PREDICTED: Bos taurus similar to Runt-related t... 40 3.5
52gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 3.5
53gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
54ref|NM_152721.2| Homo sapiens docking protein 6 (DOK6), mRNA 40 3.5
55gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
56gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.5
57gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 40 3.5
58gb|AC146155.3| Pan troglodytes BAC clone RP43-37F3 from 7, compl... 40 3.5
59gb|AC005251.1| Homo sapiens BAC clone CTA-324D18 from 7, complet... 40 3.5
60gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 3.5
61ref|XM_500185.1| Yarrowia lipolytica CLIB122, YALI0A18007g predi... 40 3.5
62gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 3.5
63gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full... 40 3.5
64emb|Z25774.2|LDMOFA Leptothrix discophora mof operon and flankin... 40 3.5
65emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 3.5
66emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 3.5
67emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 40 3.5
68gb|BC096744.1| Homo sapiens docking protein 6, mRNA (cDNA clone ... 40 3.5
69emb|AL591113.14| Mouse DNA sequence from clone RP23-253E9 on chr... 40 3.5
70gb|AE005973.1| Caulobacter crescentus CB15 section 299 of 359 of... 40 3.5
71gb|AE005930.1| Caulobacter crescentus CB15 section 256 of 359 of... 40 3.5
72gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence 40 3.5
73gb|DQ323513.1| Sphingomonadaceae bacterium Y2 hypothetical sugar... 40 3.5
74gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 3.5
75gb|CP000249.1| Frankia sp. CcI3, complete genome 40 3.5
76gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 3.5
77gb|M69129.1|CCRHFAB Caulobacter crescentus transcriptional activ... 40 3.5
78dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
79dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
80dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
81dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
82gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence 40 3.5
83gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, comple... 40 3.5
84gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.5
85gb|AY190945.1| Drosophila pseudoobscura clone DPSF01_10_G08 (D14... 40 3.5
86dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
87dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 3.5
88dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
89dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
90gb|AY298951.1| Chlamydomonas reinhardtii long flagella (LF1) gen... 40 3.5
91dbj|AK111034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
92dbj|AK109090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
93emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 3.5
94dbj|AK064929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
95gb|AF058792.1|AF058792 Caulobacter crescentus HFA-A (hfaA) gene,... 40 3.5
96gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 3.5
97emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 3.5 
>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase
           isoenzyme ARA-I mRNA, complete cds
          Length = 2647

 Score =  430 bits (217), Expect = e-117
 Identities = 256/269 (95%), Gaps = 10/269 (3%)
 Strand = Plus / Plus

                                                                       
Query: 10  ccagagcacgcacgctcgcacgctagccagccagc----agcaatggcgtcggcggcgcg 65
           |||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||
Sbjct: 1   ccagagcacgcacgctcgcacgctagccagccagccagcagcaatggcgacggcggcgcg 60

                                                                       
Query: 66  cccaccgttcctggccatggccgcggcggcgctgctggtggcggcgtggtggggcggcaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cccaccgttcctggccatggccgcggcggcgctgctggtggcggcgtggtggggcggcaa 120

                                                                       
Query: 126 tgcggggacggcggaggcgcag------gcgccggtgttcgcgtgcgacgcgtcgaacgc 179
           ||||||| ||||||||||||||      ||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgggggcggcggaggcgcaggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgc 180

                                                                       
Query: 180 gacgctggcggcctacgggttctgcaaccggaaggcgacggcgtcggcgcgcgccaggga 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacgctggcggcctacgggttctgcaaccggaaggcgacggcgtcggcgcgcgccaggga 240

                                        
Query: 240 cctggtgtcgcggctgacgctggcggaga 268
           ||| |||||||||||||||||||||||||
Sbjct: 241 cctagtgtcgcggctgacgctggcggaga 269
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>ref|XM_474061.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2298

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 200
           ||||||| ||||||||||||||||||||||||||||||||||| || | |  ||||||||
Sbjct: 75  ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 134

                      
Query: 201 ctgcaaccgga 211
           |||| ||||||
Sbjct: 135 ctgcgaccgga 145
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>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
              complete sequence
          Length = 153643

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                          
Query: 141    ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 200
              ||||||| ||||||||||||||||||||||||||||||||||| || | |  ||||||||
Sbjct: 148294 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 148235

                         
Query: 201    ctgcaaccgga 211
              |||| ||||||
Sbjct: 148234 ctgcgaccgga 148224
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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 141   ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 200
             ||||||| ||||||||||||||||||||||||||||||||||| || | |  ||||||||
Sbjct: 24581 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 24522

                        
Query: 201   ctgcaaccgga 211
             |||| ||||||
Sbjct: 24521 ctgcgaccgga 24511
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 141      ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 200
                ||||||| ||||||||||||||||||||||||||||||||||| || | |  ||||||||
Sbjct: 32629560 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 32629501

                           
Query: 201      ctgcaaccgga 211
                |||| ||||||
Sbjct: 32629500 ctgcgaccgga 32629490



 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 213     ggcgacggcgtcggcgcgcgccagg 237
               |||||||||||||||| ||||||||
Sbjct: 1768015 ggcgacggcgtcggcgagcgccagg 1767991
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>dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065A06, full
           insert sequence
          Length = 2821

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 200
           ||||||| ||||||||||||||||||||||||||||||||||| || | |  ||||||||
Sbjct: 243 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 302

                      
Query: 201 ctgcaaccgga 211
           |||| ||||||
Sbjct: 303 ctgcgaccgga 313
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>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete
            sequence
          Length = 50928

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 141  ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 200
            ||||||| ||||||||||||||||||||||||||||||||||| || | |  ||||||||
Sbjct: 2990 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 2931

                       
Query: 201  ctgcaaccgga 211
            |||| ||||||
Sbjct: 2930 ctgcgaccgga 2920
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>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0047D03, complete sequence
          Length = 126165

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 88    gcggcggcgctgctggtggcggcgt 112
             |||||||||||||||||||||||||
Sbjct: 71741 gcggcggcgctgctggtggcggcgt 71765
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>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0052B22, complete sequence
          Length = 156725

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 88   gcggcggcgctgctggtggcggcgt 112
            |||||||||||||||||||||||||
Sbjct: 6242 gcggcggcgctgctggtggcggcgt 6266
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 88       gcggcggcgctgctggtggcggcgt 112
                |||||||||||||||||||||||||
Sbjct: 16690627 gcggcggcgctgctggtggcggcgt 16690651



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 237      ggacctggtgtcgcggctgacgctggcggaga 268
                ||||||||||||||||||||||  ||||||||
Sbjct: 10514781 ggacctggtgtcgcggctgacggcggcggaga 10514750



 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 76       ctggccatggccgcggcggcg 96
                |||||||||||||||||||||
Sbjct: 18561980 ctggccatggccgcggcggcg 18561960



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 79       gccatggccgcggcggcgctgctggtgg 106
                ||||| ||||||||||||||| ||||||
Sbjct: 14977058 gccatcgccgcggcggcgctggtggtgg 14977085
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>dbj|AK108872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-C10, full
           insert sequence
          Length = 1378

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 88  gcggcggcgctgctggtggcggcgt 112
           |||||||||||||||||||||||||
Sbjct: 129 gcggcggcgctgctggtggcggcgt 153
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 88       gcggcggcgctgctggtggcggcgt 112
                |||||||||||||||||||||||||
Sbjct: 16784450 gcggcggcgctgctggtggcggcgt 16784474



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 237      ggacctggtgtcgcggctgacgctggcggaga 268
                ||||||||||||||||||||||  ||||||||
Sbjct: 10586325 ggacctggtgtcgcggctgacggcggcggaga 10586294



 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 76       ctggccatggccgcggcggcg 96
                |||||||||||||||||||||
Sbjct: 18721381 ctggccatggccgcggcggcg 18721361



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 79       gccatggccgcggcggcgctgctggtgg 106
                ||||| ||||||||||||||| ||||||
Sbjct: 15058753 gccatcgccgcggcggcgctggtggtgg 15058780
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>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0051D22, complete sequence
          Length = 119919

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 237   ggacctggtgtcgcggctgacgctggcggaga 268
             ||||||||||||||||||||||  ||||||||
Sbjct: 86145 ggacctggtgtcgcggctgacggcggcggaga 86176
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>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10
              map E20933S, complete sequence
          Length = 146118

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 237    ggacctggtgtcgcggctgacgctggcggaga 268
              ||||||||||||||||||||||  ||||||||
Sbjct: 138627 ggacctggtgtcgcggctgacggcggcggaga 138596
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>dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A01, full
           insert sequence
          Length = 1199

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 237 ggacctggtgtcgcggctgacgctggcggaga 268
           ||||||||||||||||||||||  ||||||||
Sbjct: 202 ggacctggtgtcgcggctgacggcggcggaga 233
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 88      gcggcggcgctgctggtggcgg 109
               ||||||||||||||||||||||
Sbjct: 1635785 gcggcggcgctgctggtggcgg 1635806



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      gcggcgctgctggtggcggc 110
               ||||||||||||||||||||
Sbjct: 3493277 gcggcgctgctggtggcggc 3493258
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 86      ccgcggcggcgctgctggtggc 107
               ||||||||||||||||||||||
Sbjct: 2240842 ccgcggcggcgctgctggtggc 2240863
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>ref|XM_957977.1| Neurospora crassa OR74A hypothetical protein (NCU05708.1) partial
           mRNA
          Length = 2898

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 121 ggcaatgcggggacggcggagg 142
           ||||||||||||||||||||||
Sbjct: 790 ggcaatgcggggacggcggagg 811
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>ref|XM_325562.1| Neurospora crassa OR74A hypothetical protein (NCU05708.1) partial
           mRNA
          Length = 2898

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 121 ggcaatgcggggacggcggagg 142
           ||||||||||||||||||||||
Sbjct: 790 ggcaatgcggggacggcggagg 811
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>gb|AY484967.1|AY484967S1 Homo sapiens type XVIII collagen gene, exons 1 and 2
          Length = 1598

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 75   cctggccatggccgcggcggcg 96
            ||||||||||||||||||||||
Sbjct: 1481 cctggccatggccgcggcggcg 1502
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>ref|NM_130445.1| Homo sapiens collagen, type XVIII, alpha 1 (COL18A1), transcript
          variant 2, mRNA
          Length = 5398

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 75 cctggccatggccgcggcggcg 96
          ||||||||||||||||||||||
Sbjct: 66 cctggccatggccgcggcggcg 87
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>gb|AY328853.1| Vibrio parahaemolyticus phage VP16C, partial sequence
          Length = 47537

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 88   gcggcggcgctgctggtggcgg 109
            ||||||||||||||||||||||
Sbjct: 9559 gcggcggcgctgctggtggcgg 9580
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>gb|BC063833.1| Homo sapiens collagen, type XVIII, alpha 1, transcript variant 2,
          mRNA (cDNA clone MGC:74745 IMAGE:6181818), complete cds
          Length = 4230

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 75 cctggccatggccgcggcggcg 96
          ||||||||||||||||||||||
Sbjct: 52 cctggccatggccgcggcggcg 73
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 90     ggcggcgctgctggtggcggcgtggt 115
              |||||||||||||||||||| |||||
Sbjct: 199094 ggcggcgctgctggtggcggtgtggt 199069



 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 213     ggcgacggcgtcggcgcgcgc 233
               |||||||||||||||||||||
Sbjct: 1575787 ggcgacggcgtcggcgcgcgc 1575767



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      gccatggccgcggcggcgct 98
               ||||||||||||||||||||
Sbjct: 4454583 gccatggccgcggcggcgct 4454602



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 213     ggcgacggcgtcggcgcgcg 232
               ||||||||||||||||||||
Sbjct: 1259966 ggcgacggcgtcggcgcgcg 1259985
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>dbj|AK130835.1| Homo sapiens cDNA FLJ27325 fis, clone TMS08226, highly similar to
           Collagen alpha 1(XVIII) chain precursor
          Length = 1388

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 75  cctggccatggccgcggcggcg 96
           ||||||||||||||||||||||
Sbjct: 106 cctggccatggccgcggcggcg 127
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>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 75     cctggccatggccgcggcggcg 96
              ||||||||||||||||||||||
Sbjct: 104155 cctggccatggccgcggcggcg 104176
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 84      ggccgcggcggcgctgctggtg 105
               ||||||||||||||||||||||
Sbjct: 3914442 ggccgcggcggcgctgctggtg 3914463



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      ggccgcggcggcgctgctgg 103
               ||||||||||||||||||||
Sbjct: 4742001 ggccgcggcggcgctgctgg 4742020
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>gb|AF018082.1|AF018082 Homo sapiens type XVIII collagen (COL18A1) mRNA, alternatively
          spliced, short form, complete cds
          Length = 5408

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 75 cctggccatggccgcggcggcg 96
          ||||||||||||||||||||||
Sbjct: 76 cctggccatggccgcggcggcg 97
to top
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region
             D21S171-LA161, complete sequence
          Length = 45600

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 75    cctggccatggccgcggcggcg 96
             ||||||||||||||||||||||
Sbjct: 22619 cctggccatggccgcggcggcg 22640
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>emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on chromosome 11, complete
              sequence
          Length = 144136

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 15     gcacgcacgctcgcacgctagccagccagc 44
              |||||||||| ||||||| |||||||||||
Sbjct: 116207 gcacgcacgcacgcacgccagccagccagc 116236
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>ref|XM_471136.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 213 ggcgacggcgtcggcgcgcgccagg 237
           |||||||||||||||| ||||||||
Sbjct: 463 ggcgacggcgtcggcgagcgccagg 487
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 170     cgtcgaacgcgacgctggcgg 190
               |||||||||||||||||||||
Sbjct: 2070828 cgtcgaacgcgacgctggcgg 2070808
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>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08,
              complete sequence
          Length = 165440

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     ctggccatggccgcggcggcg 96
              |||||||||||||||||||||
Sbjct: 141295 ctggccatggccgcggcggcg 141275
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>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete
              sequence
          Length = 149449

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 213    ggcgacggcgtcggcgcgcgccagg 237
              |||||||||||||||| ||||||||
Sbjct: 110967 ggcgacggcgtcggcgagcgccagg 110943
to top
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09,
             complete sequence
          Length = 155672

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 213   ggcgacggcgtcggcgcgcgccagg 237
             |||||||||||||||| ||||||||
Sbjct: 63282 ggcgacggcgtcggcgagcgccagg 63258
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 79       gccatggccgcggcggcgctg 99
                |||||||||||||||||||||
Sbjct: 29324790 gccatggccgcggcggcgctg 29324810
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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0621D05
          Length = 180250

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    gccatggccgcggcggcgctg 99
             |||||||||||||||||||||
Sbjct: 35671 gccatggccgcggcggcgctg 35691
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 86      ccgcggcggcgctgctggtggcggc 110
               ||||||||||||||||| |||||||
Sbjct: 6358083 ccgcggcggcgctgctgatggcggc 6358107
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>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0018H04
          Length = 142053

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    gccatggccgcggcggcgctg 99
             |||||||||||||||||||||
Sbjct: 87588 gccatggccgcggcggcgctg 87608
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 87      cgcggcggcgctgctggtggcggcg 111
               ||||||||||||| |||||||||||
Sbjct: 2947471 cgcggcggcgctggtggtggcggcg 2947447
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>dbj|AK064899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L13, full
            insert sequence
          Length = 2429

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 79   gccatggccgcggcggcgctg 99
            |||||||||||||||||||||
Sbjct: 1856 gccatggccgcggcggcgctg 1876
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 224     cggcgcgcgccagggacctgg 244
               |||||||||||||||||||||
Sbjct: 1531109 cggcgcgcgccagggacctgg 1531129
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>gb|U46071.1|RCU46071 Rhodobacter capsulatus cytochrome c biogenesis (cycH) gene, complete
            cds, and sarcosine oxidase gene, partial cds
          Length = 3164

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 83   tggccgcggcggcgctgctggtggcggcg 111
            |||| |||||||||||| |||||||||||
Sbjct: 1141 tggcggcggcggcgctggtggtggcggcg 1169
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>dbj|AB015725.1| Aeromonas caviae gene for aminopeptidase, complete cds
          Length = 3949

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 201  ctgcaaccggaaggcgacggcgtcg 225
            ||||||||||| |||||||||||||
Sbjct: 2523 ctgcaaccggatggcgacggcgtcg 2547
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>ref|XM_523965.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC468576), mRNA
          Length = 2742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 88   gcggcggcgctgctggtggcggcg 111
            ||||||||||||||| ||||||||
Sbjct: 2270 gcggcggcgctgctgctggcggcg 2293
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>ref|XM_475945.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 846

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  ggccatggccgcggcggcgc 97
           ||||||||||||||||||||
Sbjct: 777 ggccatggccgcggcggcgc 758
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>ref|XM_466579.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 611

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 ggcggaggcgcaggcgccgg 154
           ||||||||||||||||||||
Sbjct: 85  ggcggaggcgcaggcgccgg 104
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>gb|DQ213429.1| Taeniopygia guttata clone 0058P0001G10 tetratricopeptide repeat
           domain 1 protein-like mRNA, complete sequence
          Length = 746

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  gcggcggcgctgctggtggcggcg 111
           |||||||||||||||| |||||||
Sbjct: 34  gcggcggcgctgctggcggcggcg 57
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>ref|XM_463882.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 ggcggcgtggtggggcggca 124
           ||||||||||||||||||||
Sbjct: 180 ggcggcgtggtggggcggca 199
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>gb|AY599248.1| Homo sapiens downstream of tyrosine kinase 6 (DOK6) mRNA, complete
           cds
          Length = 1965

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  gcggcggcgctgctggtggcggcg 111
           ||||||||||||||| ||||||||
Sbjct: 74  gcggcggcgctgctgctggcggcg 97
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>ref|XM_869638.1| PREDICTED: Bos taurus similar to Runt-related transcription factor 3
            (Core-binding factor, alpha 3 subunit) (CBF-alpha 3)
            (Acute myeloid leukemia 2 protein) (Oncogene AML-2)
            (Polyomavirus enhancer binding protein 2 alpha C subunit)
            (PEBP2-alpha C) (PEA2-alpha C) (SL3-3 ... (LOC617389),
            mRNA
          Length = 1681

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   ccgcggcggcgctgctggtg 105
            ||||||||||||||||||||
Sbjct: 1219 ccgcggcggcgctgctggtg 1200
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 163   tgcgacgcgtcgaacgcgacgctggcgg 190
             |||| |||||||| ||||||||||||||
Sbjct: 43679 tgcggcgcgtcgatcgcgacgctggcgg 43706
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>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11,
             complete sequence
          Length = 112796

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    ggccatggccgcggcggcgc 97
             ||||||||||||||||||||
Sbjct: 49586 ggccatggccgcggcggcgc 49605
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>ref|NM_152721.2| Homo sapiens docking protein 6 (DOK6), mRNA
          Length = 1965

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  gcggcggcgctgctggtggcggcg 111
           ||||||||||||||| ||||||||
Sbjct: 74  gcggcggcgctgctgctggcggcg 97
to top
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0071K13, complete sequence
          Length = 176150

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 79    gccatggccgcggcggcgctgctggtgg 106
             ||||| ||||||||||||||| ||||||
Sbjct: 86845 gccatcgccgcggcggcgctggtggtgg 86872
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 21       acgctcgcacgctagccagccagc 44
                |||| |||||||||||||||||||
Sbjct: 17574637 acgcacgcacgctagccagccagc 17574660
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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete
             sequence
          Length = 97152

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    acgctcgcacgctagccagccagc 44
             |||| |||||||||||||||||||
Sbjct: 80440 acgcacgcacgctagccagccagc 80417
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>gb|AC146155.3| Pan troglodytes BAC clone RP43-37F3 from 7, complete sequence
          Length = 159409

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    ggcggaggcgcaggcgccgg 154
              ||||||||||||||||||||
Sbjct: 113967 ggcggaggcgcaggcgccgg 113948
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>gb|AC005251.1| Homo sapiens BAC clone CTA-324D18 from 7, complete sequence
          Length = 92636

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   ggcggaggcgcaggcgccgg 154
             ||||||||||||||||||||
Sbjct: 12483 ggcggaggcgcaggcgccgg 12502
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      cggcgctgctggtggcggcg 111
               ||||||||||||||||||||
Sbjct: 2944221 cggcgctgctggtggcggcg 2944202
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>ref|XM_500185.1| Yarrowia lipolytica CLIB122, YALI0A18007g predicted mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 tacgggttctgcaaccggaa 212
           ||||||||||||||||||||
Sbjct: 185 tacgggttctgcaaccggaa 166
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 88     gcggcggcgctgctggtggcggcg 111
              |||||| |||||||||||||||||
Sbjct: 363512 gcggcgacgctgctggtggcggcg 363535
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>gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full insert mRNA
           sequence
          Length = 1874

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  tggccatggccgcggcggcg 96
           ||||||||||||||||||||
Sbjct: 563 tggccatggccgcggcggcg 544
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>emb|Z25774.2|LDMOFA Leptothrix discophora mof operon and flanking genes
          Length = 9413

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  ggcgcaggcgccggtgttcg 160
            ||||||||||||||||||||
Sbjct: 8524 ggcgcaggcgccggtgttcg 8543
to top
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 90     ggcggcgctgctggtggcggcgtg 113
              ||||||||||||||||||| ||||
Sbjct: 118660 ggcggcgctgctggtggcgtcgtg 118683
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    ggcggcgctgctggtggcggcgtg 113
             ||||||||||||||||||| ||||
Sbjct: 71282 ggcggcgctgctggtggcgtcgtg 71305
to top
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 90     ggcggcgctgctggtggcggcgtg 113
              ||||||||||||||||||| ||||
Sbjct: 337431 ggcggcgctgctggtggcgtcgtg 337454
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>gb|BC096744.1| Homo sapiens docking protein 6, mRNA (cDNA clone MGC:104528
           IMAGE:5260167), complete cds
          Length = 1960

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  gcggcggcgctgctggtggcggcg 111
           ||||||||||||||| ||||||||
Sbjct: 69  gcggcggcgctgctgctggcggcg 92
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>emb|AL591113.14| Mouse DNA sequence from clone RP23-253E9 on chromosome 11 Contains a
            phosphoglycerate mutase (Pgam) family pseudogene, a
            pseudogene similar to part of chondroitin sulfate
            proteoglycan 6 Cspg6, the gene for a novel protein
            similar to human DSCAM-interacting protein 1, a novel
            gene, the Crlf3 gene for cytokine receptor-like factor 3,
            the 5' end of a novel gene and a CpG island, complete
            sequence
          Length = 204106

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gctagccagccagcagcaat 50
            ||||||||||||||||||||
Sbjct: 8161 gctagccagccagcagcaat 8142
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>gb|AE005973.1| Caulobacter crescentus CB15 section 299 of 359 of the complete genome
          Length = 10123

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 88   gcggcggcgctgctggtggcggcg 111
            |||||||||| |||||||||||||
Sbjct: 6648 gcggcggcgccgctggtggcggcg 6625
to top
>gb|AE005930.1| Caulobacter crescentus CB15 section 256 of 359 of the complete genome
          Length = 11374

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   cggcgctgctggtggcggcg 111
            ||||||||||||||||||||
Sbjct: 8475 cggcgctgctggtggcggcg 8456
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>gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence
          Length = 172798

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 88     gcggcggcgctgctggtggcggcg 111
              ||||||||||||||| ||||||||
Sbjct: 121462 gcggcggcgctgctgctggcggcg 121485
to top
>gb|DQ323513.1| Sphingomonadaceae bacterium Y2 hypothetical sugar transporter gene,
           partial cds; beta-peptidyl aminopeptidase precursor
           (bapA) gene, complete cds; and hypothetical threonine
           dehydratase gene, partial cds
          Length = 2403

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  cggcgctgctggtggcggcg 111
           ||||||||||||||||||||
Sbjct: 669 cggcgctgctggtggcggcg 688
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 81     catggccgcggcggcgctgctggtggcg 108
              ||||| ||| ||||||||||||||||||
Sbjct: 250277 catggtcgccgcggcgctgctggtggcg 250304
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 88     gcggcggcgctgctggtggcggcg 111
              |||||||||||| |||||||||||
Sbjct: 351886 gcggcggcgctggtggtggcggcg 351909



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    gacgcgtcgaacgcgacgctggcg 189
              |||||| |||||||||||||||||
Sbjct: 234592 gacgcggcgaacgcgacgctggcg 234569
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     gtcgcggctgacgctggcgg 265
               ||||||||||||||||||||
Sbjct: 2135485 gtcgcggctgacgctggcgg 2135466
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>gb|M69129.1|CCRHFAB Caulobacter crescentus transcriptional activator (hfaA) and hfaB
           (hfaB) genes, complete cds
          Length = 1729

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  cggcgctgctggtggcggcg 111
           ||||||||||||||||||||
Sbjct: 30  cggcgctgctggtggcggcg 11
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 78       ggccatggccgcggcggcgctgctggtg 105
                ||||| |||| |||||||||||||||||
Sbjct: 13890437 ggccacggccacggcggcgctgctggtg 13890464
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 78       ggccatggccgcggcggcgc 97
                ||||||||||||||||||||
Sbjct: 28730873 ggccatggccgcggcggcgc 28730892
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 21       acgctcgcacgctagccagccagc 44
                |||| |||||||||||||||||||
Sbjct: 17568178 acgcacgcacgctagccagccagc 17568201
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 135      ggcggaggcgcaggcgccgg 154
                ||||||||||||||||||||
Sbjct: 23532574 ggcggaggcgcaggcgccgg 23532593



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    ggcggcgtggtggggcggca 124
              ||||||||||||||||||||
Sbjct: 896252 ggcggcgtggtggggcggca 896271
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>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence
          Length = 7479

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 88   gcggcggcgctgctggtggcggcg 111
            ||||||||| ||||||||||||||
Sbjct: 4786 gcggcggcggtgctggtggcggcg 4763
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>gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, complete sequence
          Length = 202568

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    ggtggggcggcaatgcgggg 132
              ||||||||||||||||||||
Sbjct: 162912 ggtggggcggcaatgcgggg 162893
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 87      cgcggcggcgctgctggtggcggc 110
               |||||||||||||||| |||||||
Sbjct: 3452706 cgcggcggcgctgctgctggcggc 3452729



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 215     cgacggcgtcggcgcgcgcc 234
               ||||||||||||||||||||
Sbjct: 2643606 cgacggcgtcggcgcgcgcc 2643625



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 85     gccgcggcggcgctgctggtggcg 108
              ||||||||||||||||||| ||||
Sbjct: 197290 gccgcggcggcgctgctggcggcg 197313
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>gb|AY190945.1| Drosophila pseudoobscura clone DPSF01_10_G08 (D1416) genomic sequence
          Length = 38050

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 35    gccagccag-cagcaatggcgtcggcgg 61
             ||||||||| ||||||||||||||||||
Sbjct: 17474 gccagccagtcagcaatggcgtcggcgg 17501
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>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1442_E05
          Length = 162407

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    ggcggcgtggtggggcggca 124
              ||||||||||||||||||||
Sbjct: 105460 ggcggcgtggtggggcggca 105479
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      cggcgctgctggtggcggcg 111
               ||||||||||||||||||||
Sbjct: 3876494 cggcgctgctggtggcggcg 3876475



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 209     ggaaggcgacggcgtcggcgcgcgccag 236
               |||||||| |||||||||||||| ||||
Sbjct: 3575833 ggaaggcgtcggcgtcggcgcgcaccag 3575806
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>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0435D08
          Length = 148912

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 78    ggccatggccgcggcggcgctgctggtg 105
             ||||| |||| |||||||||||||||||
Sbjct: 44114 ggccacggccacggcggcgctgctggtg 44141
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1791_B03
          Length = 166214

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   ggcggaggcgcaggcgccgg 154
             ||||||||||||||||||||
Sbjct: 98257 ggcggaggcgcaggcgccgg 98276
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>gb|AY298951.1| Chlamydomonas reinhardtii long flagella (LF1) gene, complete cds
          Length = 7227

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   ggccgcggcggcgctgctgg 103
            ||||||||||||||||||||
Sbjct: 3647 ggccgcggcggcgctgctgg 3628
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>dbj|AK111034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H12, full
           insert sequence
          Length = 611

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 ggcggaggcgcaggcgccgg 154
           ||||||||||||||||||||
Sbjct: 85  ggcggaggcgcaggcgccgg 104
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>dbj|AK109090.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A02, full
           insert sequence
          Length = 1233

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  ggccatggccgcggcggcgc 97
           ||||||||||||||||||||
Sbjct: 887 ggccatggccgcggcggcgc 868
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     gcggcgctgctggtggcggc 110
              ||||||||||||||||||||
Sbjct: 752872 gcggcgctgctggtggcggc 752891
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>dbj|AK064929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O03, full
           insert sequence
          Length = 1483

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 ggcggcgtggtggggcggca 124
           ||||||||||||||||||||
Sbjct: 180 ggcggcgtggtggggcggca 199
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>gb|AF058792.1|AF058792 Caulobacter crescentus HFA-A (hfaA) gene, complete cds
          Length = 666

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  cggcgctgctggtggcggcg 111
           ||||||||||||||||||||
Sbjct: 30  cggcgctgctggtggcggcg 11
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     ggcgacggcgtcggcgcgcg 232
               ||||||||||||||||||||
Sbjct: 1477298 ggcgacggcgtcggcgcgcg 1477279
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     tacgggttctgcaaccggaa 212
               ||||||||||||||||||||
Sbjct: 1874535 tacgggttctgcaaccggaa 1874516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,990,943
Number of Sequences: 3902068
Number of extensions: 1990943
Number of successful extensions: 60593
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56176
Number of HSP's gapped (non-prelim): 4417
length of query: 268
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 246
effective length of database: 17,147,199,772
effective search space: 4218211143912
effective search space used: 4218211143912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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