Clone Name | bastl40g07 |
---|---|
Clone Library Name | barley_pub |
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 545 bits (275), Expect = e-152 Identities = 347/369 (94%), Gaps = 4/369 (1%) Strand = Plus / Minus Query: 30 actgttccacagtcgtcgtcccctgtcccctccccgtcctccgccccgc---ccgcaatc 86 |||||||||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 4572 actgttccacagtcgtcgtcccctgtcccctccccgtcctccgccc-gcaatcggcaact 4514 Query: 87 caatcccggaccggcggctggcgggcgagcgagcgagatggcgacgctgacctcggagct 146 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 4513 caatcccggaccggcggctggcgagcgagcgagcgagatggcgacgctgacctcggacct 4454 Query: 147 gctgcggccggtgcacgaggcgcaggcgctggacgaggcggcgctgctgcggtacgcggc 206 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 4453 gctgcggccggtgcacgaggcgtaggcgctggacaaggcggcgctgctgcggtacgtagc 4394 Query: 207 cgcgcacgtcccgggcttccccgcgccggcgccggcgctcgccctcacgcagttcggcca 266 ||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||||| Sbjct: 4393 cgcgcacgtcccgggcttccccgcgtgggccccgtcgctcgccctcacgaagttcggcca 4334 Query: 267 cggccagtccaaccccacctactgcctcgaggcctccgctcccggcggggagccccggcg 326 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4333 cgaccagtccaaccccacctactgcctcgaggcctccgcgcccggcggggagccccggcg 4274 Query: 327 ctacgtgctgcggaagaagcccgccggcgccatcctccagtccgcccacgccgtcgagcg 386 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4273 gtacgtgctgcagaagaagcccgccggcgccatcctccagtccgcccacgccgtcgagcg 4214 Query: 387 cgagttcca 395 ||||||||| Sbjct: 4213 cgagttcca 4205
>ref|XM_479496.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2721 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Plus Query: 127 gcgacgctgacctcggagctgctgcggccggtgcacgaggcgcaggcgctggacgaggcg 186 |||| ||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| Sbjct: 71 gcgatgctgacctcggggctgctgcggccggtcgacgatgcgcacgcgatcgacgaggcg 130 Query: 187 gcgctgctgcggtacgcggccgcgcacgtcccgggcttccccgcgccggcgccggcgctc 246 ||||||||||| |||||||| | ||||||| | || |||||| | ||||||| || ||| Sbjct: 131 gcgctgctgcgctacgcggcggagcacgtcgccgggttcccctccccggcgcgggggctg 190 Query: 247 gccctcacgcagttcggccacggccagtccaaccccacctactgcctcgaggcctccgct 306 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 191 gccctgacgcagttcggccacggccagtccaaccccacctactgcatcgaggcctccgcc 250 Query: 307 cccggcggggagccccggcgctacgtgctgcggaagaagcccgccggcgccatcctccag 366 |||||||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 251 cccggcggggtcaccgcgcgctacgtgctgcggaagaagccgcccggcgccatcctccag 310 Query: 367 tccgcccacgccgtcgagcgcgagttccaggttctcaaggctctgggtgcttacacggat 426 |||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||| ||| Sbjct: 311 tccgcccacgccgtcgagcgcgagttccaggtcctcaaagctttgggcacttacactgat 370 Query: 427 gtt 429 ||| Sbjct: 371 gtt 373
>dbj|AK073523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044B11, full insert sequence Length = 2721 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Plus Query: 127 gcgacgctgacctcggagctgctgcggccggtgcacgaggcgcaggcgctggacgaggcg 186 |||| ||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| Sbjct: 71 gcgatgctgacctcggggctgctgcggccggtcgacgatgcgcacgcgatcgacgaggcg 130 Query: 187 gcgctgctgcggtacgcggccgcgcacgtcccgggcttccccgcgccggcgccggcgctc 246 ||||||||||| |||||||| | ||||||| | || |||||| | ||||||| || ||| Sbjct: 131 gcgctgctgcgctacgcggcggagcacgtcgccgggttcccctccccggcgcgggggctg 190 Query: 247 gccctcacgcagttcggccacggccagtccaaccccacctactgcctcgaggcctccgct 306 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 191 gccctgacgcagttcggccacggccagtccaaccccacctactgcatcgaggcctccgcc 250 Query: 307 cccggcggggagccccggcgctacgtgctgcggaagaagcccgccggcgccatcctccag 366 |||||||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 251 cccggcggggtcaccgcgcgctacgtgctgcggaagaagccgcccggcgccatcctccag 310 Query: 367 tccgcccacgccgtcgagcgcgagttccaggttctcaaggctctgggtgcttacacggat 426 |||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||| ||| Sbjct: 311 tccgcccacgccgtcgagcgcgagttccaggtcctcaaagctttgggcacttacactgat 370 Query: 427 gtt 429 ||| Sbjct: 371 gtt 373
>dbj|AK065843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042C14, full insert sequence Length = 1261 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Plus Query: 127 gcgacgctgacctcggagctgctgcggccggtgcacgaggcgcaggcgctggacgaggcg 186 |||| ||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| Sbjct: 79 gcgatgctgacctcggggctgctgcggccggtcgacgatgcgcacgcgatcgacgaggcg 138 Query: 187 gcgctgctgcggtacgcggccgcgcacgtcccgggcttccccgcgccggcgccggcgctc 246 ||||||||||| |||||||| | ||||||| | || |||||| | ||||||| || ||| Sbjct: 139 gcgctgctgcgctacgcggcggagcacgtcgccgggttcccctccccggcgcgggggctg 198 Query: 247 gccctcacgcagttcggccacggccagtccaaccccacctactgcctcgaggcctccgct 306 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 199 gccctgacgcagttcggccacggccagtccaaccccacctactgcatcgaggcctccgcc 258 Query: 307 cccggcggggagccccggcgctacgtgctgcggaagaagcccgccggcgccatcctccag 366 |||||||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 259 cccggcggggtcaccgcgcgctacgtgctgcggaagaagccgcccggcgccatcctccag 318 Query: 367 tccgcccacgccgtcgagcgcgagttccaggttctcaaggctctgggtgcttacacggat 426 |||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||| ||| Sbjct: 319 tccgcccacgccgtcgagcgcgagttccaggtcctcaaagctttgggcacttacactgat 378 Query: 427 gtt 429 ||| Sbjct: 379 gtt 381
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 309 bits (156), Expect = 4e-81 Identities = 243/272 (89%) Strand = Plus / Plus Query: 127 gcgacgctgacctcggagctgctgcggccggtgcacgaggcgcaggcgctggacgaggcg 186 |||| ||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| Sbjct: 28499140 gcgatgctgacctcggggctgctgcggccggtcgacgatgcgcacgcgatcgacgaggcg 28499199 Query: 187 gcgctgctgcggtacgcggccgcgcacgtcccgggcttccccgcgccggcgccggcgctc 246 ||||||||||| |||||||| | ||||||| | || |||||| | ||||||| || ||| Sbjct: 28499200 gcgctgctgcgctacgcggcggagcacgtcgccgggttcccctccccggcgcgggggctg 28499259 Query: 247 gccctcacgcagttcggccacggccagtccaaccccacctactgcctcgaggcctccgct 306 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28499260 gccctgacgcagttcggccacggccagtccaaccccacctactgcatcgaggcctccgcc 28499319 Query: 307 cccggcggggagccccggcgctacgtgctgcggaagaagcccgccggcgccatcctccag 366 |||||||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 28499320 cccggcggggtcaccgcgcgctacgtgctgcggaagaagccgcccggcgccatcctccag 28499379 Query: 367 tccgcccacgccgtcgagcgcgagttccaggt 398 |||||||||||||||||||||||||||||||| Sbjct: 28499380 tccgcccacgccgtcgagcgcgagttccaggt 28499411
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 309 bits (156), Expect = 4e-81 Identities = 243/272 (89%) Strand = Plus / Plus Query: 127 gcgacgctgacctcggagctgctgcggccggtgcacgaggcgcaggcgctggacgaggcg 186 |||| ||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| Sbjct: 64892 gcgatgctgacctcggggctgctgcggccggtcgacgatgcgcacgcgatcgacgaggcg 64951 Query: 187 gcgctgctgcggtacgcggccgcgcacgtcccgggcttccccgcgccggcgccggcgctc 246 ||||||||||| |||||||| | ||||||| | || |||||| | ||||||| || ||| Sbjct: 64952 gcgctgctgcgctacgcggcggagcacgtcgccgggttcccctccccggcgcgggggctg 65011 Query: 247 gccctcacgcagttcggccacggccagtccaaccccacctactgcctcgaggcctccgct 306 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 65012 gccctgacgcagttcggccacggccagtccaaccccacctactgcatcgaggcctccgcc 65071 Query: 307 cccggcggggagccccggcgctacgtgctgcggaagaagcccgccggcgccatcctccag 366 |||||||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 65072 cccggcggggtcaccgcgcgctacgtgctgcggaagaagccgcccggcgccatcctccag 65131 Query: 367 tccgcccacgccgtcgagcgcgagttccaggt 398 |||||||||||||||||||||||||||||||| Sbjct: 65132 tccgcccacgccgtcgagcgcgagttccaggt 65163
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 309 bits (156), Expect = 4e-81 Identities = 243/272 (89%) Strand = Plus / Plus Query: 127 gcgacgctgacctcggagctgctgcggccggtgcacgaggcgcaggcgctggacgaggcg 186 |||| ||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| Sbjct: 56681 gcgatgctgacctcggggctgctgcggccggtcgacgatgcgcacgcgatcgacgaggcg 56740 Query: 187 gcgctgctgcggtacgcggccgcgcacgtcccgggcttccccgcgccggcgccggcgctc 246 ||||||||||| |||||||| | ||||||| | || |||||| | ||||||| || ||| Sbjct: 56741 gcgctgctgcgctacgcggcggagcacgtcgccgggttcccctccccggcgcgggggctg 56800 Query: 247 gccctcacgcagttcggccacggccagtccaaccccacctactgcctcgaggcctccgct 306 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 56801 gccctgacgcagttcggccacggccagtccaaccccacctactgcatcgaggcctccgcc 56860 Query: 307 cccggcggggagccccggcgctacgtgctgcggaagaagcccgccggcgccatcctccag 366 |||||||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 56861 cccggcggggtcaccgcgcgctacgtgctgcggaagaagccgcccggcgccatcctccag 56920 Query: 367 tccgcccacgccgtcgagcgcgagttccaggt 398 |||||||||||||||||||||||||||||||| Sbjct: 56921 tccgcccacgccgtcgagcgcgagttccaggt 56952
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 309 cggcggggagccccggcgctacgtgctgcgg 339 ||||||||||||||||||| ||||||||||| Sbjct: 59949 cggcggggagccccggcgcgacgtgctgcgg 59979 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 313 ggggagccccggcgctacgtgctgcgg 339 ||||||||||||||| ||||||||||| Sbjct: 26510 ggggagccccggcgcgacgtgctgcgg 26536
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 309 cggcggggagccccggcgctacgtgctgcgg 339 ||||||||||||||||||| ||||||||||| Sbjct: 10890745 cggcggggagccccggcgcgacgtgctgcgg 10890775 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 313 ggggagccccggcgctacgtgctgcgg 339 ||||||||||||||| ||||||||||| Sbjct: 10857306 ggggagccccggcgcgacgtgctgcgg 10857332 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cctccccgtcctccgccccgcccgc 82 ||||||||||||||||| ||||||| Sbjct: 18652437 cctccccgtcctccgcctcgcccgc 18652461
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 329 acgtgctgcggaagaagcccgccg 352 |||||||||||||||||||||||| Sbjct: 4460572 acgtgctgcggaagaagcccgccg 4460595
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 cttccccgcgccggcgccggcgc 244 ||||||||||||||||||||||| Sbjct: 2878760 cttccccgcgccggcgccggcgc 2878738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 cacgaggcgcaggcgctggac 180 ||||||||||||||||||||| Sbjct: 4869474 cacgaggcgcaggcgctggac 4869494 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 gcgcaggcgctggacgaggcggcgc 190 ||||||||| ||||||||||||||| Sbjct: 1952958 gcgcaggcggtggacgaggcggcgc 1952934 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggacgaggcggcgctgctg 195 |||||||||||||||||||| Sbjct: 2504692 tggacgaggcggcgctgctg 2504673 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ccgcgccggcgccggcgctc 246 |||||||||||||||||||| Sbjct: 1891948 ccgcgccggcgccggcgctc 1891967
>ref|XM_469631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tcccctccccgtcctccgcccc 76 |||||||||||||||||||||| Sbjct: 191 tcccctccccgtcctccgcccc 212
>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 4912 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ggacgaggcggcgctgctgcgg 198 |||||||||||||||||||||| Sbjct: 1838 ggacgaggcggcgctgctgcgg 1817
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cccgcgccggcgccggcgctcg 247 |||||||||||||||||||||| Sbjct: 1827807 cccgcgccggcgccggcgctcg 1827786 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 gcgcaggcgctggacgaggcg 186 ||||||||||||||||||||| Sbjct: 548629 gcgcaggcgctggacgaggcg 548649
>gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4, mRNA (cDNA clone MGC:71240 IMAGE:6584346), complete cds Length = 2107 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ggacgaggcggcgctgctgcgg 198 |||||||||||||||||||||| Sbjct: 1658 ggacgaggcggcgctgctgcgg 1637
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tcccctccccgtcctccgcccc 76 |||||||||||||||||||||| Sbjct: 29887423 tcccctccccgtcctccgcccc 29887444
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 tcccctccccgtcctccgcccc 76 |||||||||||||||||||||| Sbjct: 123183 tcccctccccgtcctccgcccc 123162
>emb|AL136179.15| Human DNA sequence from clone RP3-322L4 on chromosome 6 Contains the SOX4 gene for SRY (sex determining region Y)-box 4, a novel pseudogene and CpG islands, complete sequence Length = 128728 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ggacgaggcggcgctgctgcgg 198 |||||||||||||||||||||| Sbjct: 11276 ggacgaggcggcgctgctgcgg 11255
>emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein Length = 2797 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ggacgaggcggcgctgctgcgg 198 |||||||||||||||||||||| Sbjct: 1394 ggacgaggcggcgctgctgcgg 1373
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tcccctccccgtcctccgcccc 76 |||||||||||||||||||||| Sbjct: 53364 tcccctccccgtcctccgcccc 53385
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tcccctccccgtcctccgcccc 76 |||||||||||||||||||||| Sbjct: 29978845 tcccctccccgtcctccgcccc 29978866
>ref|XM_481935.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2037 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gcgccggcgccggcgctcgcc 249 ||||||||||||||||||||| Sbjct: 77 gcgccggcgccggcgctcgcc 97
>ref|XM_483188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 322 tccccgcgccggcgccggcgc 302
>ref|XM_483187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2067 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 78 tccccgcgccggcgccggcgc 98
>gb|DQ143891.1| Mus musculus transforming growth factor beta 1 isoform alpha-B (Tgfb1i1) mRNA, complete cds Length = 1801 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 111 cccctccccgtcctccgcccc 131
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cctccccgtcctccgccccgcccgc 82 ||||||||||||||||| ||||||| Sbjct: 125552 cctccccgtcctccgcctcgcccgc 125576
>ref|NM_009365.2| Mus musculus transforming growth factor beta 1 induced transcript 1 (Tgfb1i1), mRNA Length = 3058 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 51 cccctccccgtcctccgcccc 71
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tccaggttctcaaggctctgg 412 ||||||||||||||||||||| Sbjct: 190381 tccaggttctcaaggctctgg 190361
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 gtacgcggccgcgcacgtcccgggc 222 |||||||||||||||||| |||||| Sbjct: 2699447 gtacgcggccgcgcacgtgccgggc 2699423
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 gtacgcggccgcgcacgtcccgggc 222 |||||||||||||||||| |||||| Sbjct: 879870 gtacgcggccgcgcacgtgccgggc 879846
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 gaggcgcaggcgctggacgaggcgg 187 |||||||||||||||| |||||||| Sbjct: 119913 gaggcgcaggcgctggccgaggcgg 119889
>gb|BC056362.1| Mus musculus transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:73451 IMAGE:6816930), complete cds Length = 3058 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 51 cccctccccgtcctccgcccc 71
>gb|AE005757.1| Caulobacter crescentus CB15 section 83 of 359 of the complete genome Length = 11110 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 cgcccacgccgtcgagcgcga 389 ||||||||||||||||||||| Sbjct: 9971 cgcccacgccgtcgagcgcga 9951
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 cgctggacgaggcggcgctgctgcg 197 |||||||||| |||||||||||||| Sbjct: 30427 cgctggacgatgcggcgctgctgcg 30403
>gb|AY082958.1| Hordeum vulgare CONSTANS-like protein CO5 (CO5) gene, complete cds Length = 1060 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gtcccctccccgtcctccgcc 74 ||||||||||||||||||||| Sbjct: 373 gtcccctccccgtcctccgcc 393
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 gtacgcggccgcgcacgtcccgggc 222 |||||||||||||||||| |||||| Sbjct: 862883 gtacgcggccgcgcacgtgccgggc 862859
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 24697295 tccccgcgccggcgccggcgc 24697275 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gcgccggcgccggcgctcgcc 249 ||||||||||||||||||||| Sbjct: 16523917 gcgccggcgccggcgctcgcc 16523897
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 gaagcccgccggcgccatcctccag 366 |||||| |||||||||||||||||| Sbjct: 253083 gaagccagccggcgccatcctccag 253107
>ref|XM_341934.2| PREDICTED: Rattus norvegicus transforming growth factor beta 1 induced transcript 1 (Tgfb1i1), mRNA Length = 2119 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 100 cccctccccgtcctccgcccc 120
>gb|AF083064.1|AF083064 Mus musculus paxillin-like protein (Hic5) gene, complete cds Length = 10172 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 2379 cccctccccgtcctccgcccc 2399
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 69599 tccccgcgccggcgccggcgc 69579
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gcgccggcgccggcgctcgcc 249 ||||||||||||||||||||| Sbjct: 134573 gcgccggcgccggcgctcgcc 134553
>dbj|AK111024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H02, full insert sequence Length = 588 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 322 tccccgcgccggcgccggcgc 302
>dbj|AK105904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F12, full insert sequence Length = 1456 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cctccccgtcctccgccccgcccgc 82 ||||||||||||||||| ||||||| Sbjct: 207 cctccccgtcctccgcctcgcccgc 231
>dbj|AK100141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011B13, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 71 tccccgcgccggcgccggcgc 91
>dbj|AK099989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130P18, full insert sequence Length = 2046 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gcgccggcgccggcgctcgcc 249 ||||||||||||||||||||| Sbjct: 25 gcgccggcgccggcgctcgcc 45
>dbj|AK073076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010D24, full insert sequence Length = 2066 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tccccgcgccggcgccggcgc 244 ||||||||||||||||||||| Sbjct: 77 tccccgcgccggcgccggcgc 97
>dbj|AK071671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D13, full insert sequence Length = 2038 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gcgccggcgccggcgctcgcc 249 ||||||||||||||||||||| Sbjct: 78 gcgccggcgccggcgctcgcc 98
>gb|AC124566.5| Mus musculus BAC clone RP23-144N15 from 7, complete sequence Length = 181231 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 42184 cccctccccgtcctccgcccc 42164
>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence Length = 158312 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 tcccctgtcccctccccgtcctccgcccc 76 ||||| ||||||||||| ||||||||||| Sbjct: 64395 tcccccgtcccctccccatcctccgcccc 64423
>gb|AC149220.3| Mus musculus BAC clone RP23-412J12 from 7, complete sequence Length = 172077 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgcccc 76 ||||||||||||||||||||| Sbjct: 26090 cccctccccgtcctccgcccc 26110
>emb|AL672200.10| Mouse DNA sequence from clone RP23-37G19 on chromosome 3, complete sequence Length = 89129 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tccaggttctcaaggctctgg 412 ||||||||||||||||||||| Sbjct: 31239 tccaggttctcaaggctctgg 31219
>gb|DQ215237.1| Taeniopygia guttata clone 0058P0053H09 SRB7 suppressor of RNA polymerase B variant 1-like mRNA, complete sequence Length = 1005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccgctcccggcggggagccc 321 |||||||||||||||||||| Sbjct: 556 ccgctcccggcggggagccc 537
>ref|XM_472835.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccccgcgccggcgccggcgc 244 |||||||||||||||||||| Sbjct: 105 ccccgcgccggcgccggcgc 124
>ref|XM_600917.2| PREDICTED: Bos taurus similar to tripartite motif protein TRIM14 isoform alpha (LOC522632), partial mRNA Length = 991 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ggcgctggacgaggcggcgc 190 |||||||||||||||||||| Sbjct: 369 ggcgctggacgaggcggcgc 388
>ref|XM_593294.2| PREDICTED: Bos taurus similar to Growth-arrest-specific protein 1 precursor (GAS-1) (LOC540336), mRNA Length = 1044 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 ggcggcgctgctgcggtacgcggccgcg 210 |||||||||||||||| | ||||||||| Sbjct: 904 ggcggcgctgctgcggcaggcggccgcg 931
>ref|NM_031177.1| Mus musculus intraflagellar transport 122 homolog (Chlamydomonas) (Ift122), mRNA Length = 4059 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2985 caaggctctgggtgcttaca 3004
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 aggcgctggacgaggcggcgctgc 193 |||||||| ||||||||||||||| Sbjct: 1604401 aggcgctgcacgaggcggcgctgc 1604424
>ref|NM_001395.1| Homo sapiens dual specificity phosphatase 9 (DUSP9), mRNA Length = 2303 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgctcgccct 251 ||||||||||||||||||| | |||||| Sbjct: 388 tccccgcgccggcgccggcccccgccct 361
>gb|AC146078.3| Pan troglodytes BAC clone RP43-45C11 from 7, complete sequence Length = 53091 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcccggaccggcggctggcgggcg 113 |||||||| ||||||||||||||| Sbjct: 43049 tcccggacgggcggctggcgggcg 43026
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gctggacgaggcggcgctgc 193 |||||||||||||||||||| Sbjct: 97472 gctggacgaggcggcgctgc 97491
>ref|XM_746650.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g10840) partial mRNA Length = 1020 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tgctgcggccggtgcacgag 165 |||||||||||||||||||| Sbjct: 527 tgctgcggccggtgcacgag 546
>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete sequence Length = 169506 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tcccctgtcccctccccgtcctcc 71 |||||||||||||||||| ||||| Sbjct: 126221 tcccctgtcccctccccggcctcc 126244
>gb|U52111.3| Homo sapiens chromosome X clone Qc-7G6, QLL-F1720, QLL-C1335, Qc-8B7, Qc-11H12, Qc-7F6, QLL-E153, Qc-10E8, Qc-10B7 map q28, complete sequence Length = 247592 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgctcgccct 251 ||||||||||||||||||| | |||||| Sbjct: 31436 tccccgcgccggcgccggcccccgccct 31409
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tcccggaccggcggctggcg 109 |||||||||||||||||||| Sbjct: 1773113 tcccggaccggcggctggcg 1773094
>emb|Y08302.1|HSMAPKP4 H.sapiens mRNA for MAP kinase phosphatase 4 Length = 2303 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgctcgccct 251 ||||||||||||||||||| | |||||| Sbjct: 388 tccccgcgccggcgccggcccccgccct 361
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcacgcagttcggccacggc 270 |||||||||||||||||||| Sbjct: 4276407 tcacgcagttcggccacggc 4276426
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 tcgaggcctccgctcccggcggggagcc 320 ||||||||| ||||||||||| |||||| Sbjct: 96674 tcgaggcctgcgctcccggcgaggagcc 96701
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccccgcgccggcgccggcgc 244 |||||||||||||||||||| Sbjct: 18542 ccccgcgccggcgccggcgc 18523
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 cgccggcgccggcgctcgcc 249 |||||||||||||||||||| Sbjct: 113535 cgccggcgccggcgctcgcc 113516
>gb|BC060837.1| Homo sapiens dual specificity phosphatase 9, mRNA (cDNA clone MGC:71726 IMAGE:30339218), complete cds Length = 2441 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgctcgccct 251 ||||||||||||||||||| | |||||| Sbjct: 533 tccccgcgccggcgccggcccccgccct 506
>gb|BC034936.1| Homo sapiens, Similar to dual specificity phosphatase 9, clone IMAGE:5087339, mRNA, partial cds Length = 2132 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgctcgccct 251 ||||||||||||||||||| | |||||| Sbjct: 187 tccccgcgccggcgccggcccccgccct 160
>gb|AC087477.8| Homo sapiens chromosome 15, clone RP11-522B15, complete sequence Length = 191434 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cgggcttccccgcgccggcg 237 |||||||||||||||||||| Sbjct: 66008 cgggcttccccgcgccggcg 66027
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cgaggcggcgctgctgcggt 199 |||||||||||||||||||| Sbjct: 2712166 cgaggcggcgctgctgcggt 2712185
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccccgcgccggcgccggcgc 244 |||||||||||||||||||| Sbjct: 58758 ccccgcgccggcgccggcgc 58739
>gb|AC112031.4| Rattus norvegicus BAC CH230-99K18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 242158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ctcaaggctctgggtgctta 419 |||||||||||||||||||| Sbjct: 171295 ctcaaggctctgggtgctta 171314
>gb|AC018714.4| Homo sapiens BAC clone RP11-382A18 from 8, complete sequence Length = 176760 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcccggaccggcggctggcgggcg 113 |||||||| ||||||||||||||| Sbjct: 85058 tcccggacgggcggctggcgggcg 85035
>dbj|AK169642.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430003N12 product:WD repeat domain 10, full insert sequence Length = 1172 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 241 caaggctctgggtgcttaca 260
>dbj|AK167412.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I530012G24 product:WD repeat domain 10, full insert sequence Length = 3869 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2937 caaggctctgggtgcttaca 2956
>dbj|AK167330.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530005F18 product:WD repeat domain 10, full insert sequence Length = 3869 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2937 caaggctctgggtgcttaca 2956
>gb|AY046055.1| Homo sapiens zonadhesin (ZAN) gene, complete cds, alternatively spliced Length = 68037 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 tcccggaccggcggctggcgggcg 113 |||||||| ||||||||||||||| Sbjct: 10678 tcccggacgggcggctggcgggcg 10701
>emb|CR386374.1| Gallus gallus finished cDNA, clone ChEST934h19 Length = 914 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 aggcgctggacgaggcggcgctgc 193 |||||||||| ||||||||||||| Sbjct: 240 aggcgctggaggaggcggcgctgc 263
>dbj|AK077104.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933405L17 product:SPG PROTEIN homolog [Homo sapiens], full insert sequence Length = 2524 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 1445 caaggctctgggtgcttaca 1464
>dbj|AK031308.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030405E03 product:WD repeat domain 10, full insert sequence Length = 3802 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2870 caaggctctgggtgcttaca 2889
>dbj|AK044456.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930014C13 product:WD repeat domain 10, full insert sequence Length = 4059 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2985 caaggctctgggtgcttaca 3004
>dbj|AK044052.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830084H06 product:WD repeat domain 10, full insert sequence Length = 1791 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 693 caaggctctgggtgcttaca 712
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccccgcgccggcgccggcgc 244 |||||||||||||||||||| Sbjct: 23575861 ccccgcgccggcgccggcgc 23575842 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ggacgaggcggcgctgctgc 196 |||||||||||||||||||| Sbjct: 2853848 ggacgaggcggcgctgctgc 2853829
>gb|AC064834.5| Homo sapiens BAC clone RP11-666B15 from 2, complete sequence Length = 169529 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcccggaccggcggctggcgggcg 113 |||||||| ||||||||||||||| Sbjct: 97982 tcccggacgggcggctggcgggcg 97959
>dbj|AK131115.1| Mus musculus mRNA for mFLJ00025 protein Length = 3986 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2909 caaggctctgggtgcttaca 2928
>gb|AC105036.14| Homo sapiens chromosome 15, clone CTD-2323K18, complete sequence Length = 144333 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcccggaccggcggctggcgggcg 113 |||||||| ||||||||||||||| Sbjct: 20819 tcccggacgggcggctggcgggcg 20796
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cggcggctggcgggcgagcg 117 |||||||||||||||||||| Sbjct: 4527652 cggcggctggcgggcgagcg 4527633
>emb|BX929709.1| Gallus gallus finished cDNA, clone ChEST801n15 Length = 910 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 aggcgctggacgaggcggcgctgc 193 |||||||||| ||||||||||||| Sbjct: 233 aggcgctggaggaggcggcgctgc 256
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgtgctgcggaagaagcccg 349 |||||||||||||||||||| Sbjct: 1968889 cgtgctgcggaagaagcccg 1968870
>gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complete sequence Length = 165768 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ctgcctcgaggcctccgctc 307 |||||||||||||||||||| Sbjct: 19798 ctgcctcgaggcctccgctc 19817
>gb|BC042166.1| Homo sapiens, Similar to dual specificity phosphatase 9, clone IMAGE:5086824, mRNA, partial cds Length = 2132 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcgctcgccct 251 ||||||||||||||||||| | |||||| Sbjct: 187 tccccgcgccggcgccggcccccgccct 160
>gb|AC023632.19| Homo sapiens chromosome 8, clone RP11-267M23, complete sequence Length = 183859 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcccggaccggcggctggcgggcg 113 |||||||| ||||||||||||||| Sbjct: 177454 tcccggacgggcggctggcgggcg 177431
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgggcgagcgagcgagatg 126 |||||||||||||||||||| Sbjct: 4510727 gcgggcgagcgagcgagatg 4510746
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 cgccggcgccggcgctcgcc 249 |||||||||||||||||||| Sbjct: 1203750 cgccggcgccggcgctcgcc 1203731
>ref|XM_556056.1| Anopheles gambiae str. PEST ENSANGP00000028829 (ENSANGG00000011587), partial mRNA Length = 741 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ggcgctgctgcggtacgcgg 205 |||||||||||||||||||| Sbjct: 333 ggcgctgctgcggtacgcgg 314
>ref|XM_315421.2| Anopheles gambiae str. PEST ENSANGP00000014076 (ENSANGG00000011587), partial mRNA Length = 848 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ggcgctgctgcggtacgcgg 205 |||||||||||||||||||| Sbjct: 524 ggcgctgctgcggtacgcgg 505
>dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B08, full insert sequence Length = 1166 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccccgcgccggcgccggcgc 244 |||||||||||||||||||| Sbjct: 177 ccccgcgccggcgccggcgc 196
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cggccagtccaaccccacct 286 |||||||||||||||||||| Sbjct: 2194977 cggccagtccaaccccacct 2194996
>dbj|AP000821.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-673E11, complete sequence Length = 180821 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cccggcggggagccccggcg 326 |||||||||||||||||||| Sbjct: 90382 cccggcggggagccccggcg 90363
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccgccggcgccatcctccag 366 |||||||||||||||||||| Sbjct: 1898634 ccgccggcgccatcctccag 1898615
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tccccgcgccggcgccggcg 243 |||||||||||||||||||| Sbjct: 52196 tccccgcgccggcgccggcg 52177
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccccgcgccggcgccggcgc 244 |||||||||||||||||||| Sbjct: 131764 ccccgcgccggcgccggcgc 131745
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 30591 caaggctctgggtgcttaca 30572
>gb|BC066083.1| Mus musculus intraflagellar transport 122 homolog (Chlamydomonas), mRNA (cDNA clone MGC:90124 IMAGE:30355922), complete cds Length = 4059 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2901 caaggctctgggtgcttaca 2920
>gb|BC060621.1| Mus musculus intraflagellar transport 122 homolog (Chlamydomonas), mRNA (cDNA clone IMAGE:6822235) Length = 4512 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 3368 caaggctctgggtgcttaca 3387
>gb|BC067415.1| Mus musculus intraflagellar transport 122 homolog (Chlamydomonas), mRNA (cDNA clone MGC:76788 IMAGE:30063124), complete cds Length = 3846 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 2898 caaggctctgggtgcttaca 2917
>gb|BC038826.1| Mus musculus intraflagellar transport 122 homolog (Chlamydomonas), mRNA (cDNA clone IMAGE:4482155), with apparent retained intron Length = 4289 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggctctgggtgcttaca 421 |||||||||||||||||||| Sbjct: 3197 caaggctctgggtgcttaca 3216
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 gcaggcgctggacgaggcggcgctgctg 195 ||||||||||||| |||||||| ||||| Sbjct: 3107782 gcaggcgctggacaaggcggcggtgctg 3107755
>emb|AL831733.4| Mouse DNA sequence from clone RP23-109O11 on chromosome 4, complete sequence Length = 196863 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cccctccccgtcctccgccc 75 |||||||||||||||||||| Sbjct: 112921 cccctccccgtcctccgccc 112940
>dbj|AB070946.1| Streptomyces avermitilis polyketide-8 biosynthetic gene cluster Length = 24790 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cggcggctggcgggcgagcg 117 |||||||||||||||||||| Sbjct: 17014 cggcggctggcgggcgagcg 17033 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,590,416 Number of Sequences: 3902068 Number of extensions: 2590416 Number of successful extensions: 87709 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82266 Number of HSP's gapped (non-prelim): 5432 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)