ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl40g05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466647.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3326 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 373 cattgccgaagattgccgagaaatcccaggatttgggaggtaatcc 418 |||||| |||| ||| ||| ||||||||||||||||||||||||| Sbjct: 631 cattgctgaagggtgctgaggaatcccaggatttgggaggtaatcc 676
>dbj|AK119319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-H08, full insert sequence Length = 3326 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 373 cattgccgaagattgccgagaaatcccaggatttgggaggtaatcc 418 |||||| |||| ||| ||| ||||||||||||||||||||||||| Sbjct: 631 cattgctgaagggtgctgaggaatcccaggatttgggaggtaatcc 676
>dbj|AK109586.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B03, full insert sequence Length = 1379 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 373 cattgccgaagattgccgagaaatcccaggatttgggaggtaatcc 418 |||||| |||| ||| ||| ||||||||||||||||||||||||| Sbjct: 644 cattgctgaagggtgctgaggaatcccaggatttgggaggtaatcc 689
>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete sequence Length = 152730 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccgg 95 |||||||||| |||||||||||||||| Sbjct: 24650 gccgccgccgccgcctccaccgcccgg 24624
>gb|AC163686.3| Mus musculus BAC clone RP23-3C10 from chromosome 6, complete sequence Length = 209207 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 aaatcccaggatttgggaggta 414 |||||||||||||||||||||| Sbjct: 192446 aaatcccaggatttgggaggta 192425
>gb|AC022235.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-121E15, complete sequence Length = 197761 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 aaatcccaggatttgggaggta 414 |||||||||||||||||||||| Sbjct: 102804 aaatcccaggatttgggaggta 102825
>gb|AC138284.9| Mus musculus chromosome 9, clone RP23-356D13, complete sequence Length = 220266 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggtaa 415 |||||||||||||||||||||| Sbjct: 20500 aatcccaggatttgggaggtaa 20479
>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence Length = 188819 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 agagctcagagcagctcccagg 364 |||||||||||||||||||||| Sbjct: 75607 agagctcagagcagctcccagg 75628
>gb|AC007784.7| Homo sapiens 12p13 BAC RPCI11-1092P21 (Roswell Park Cancer Library Human BAC Library) complete sequence Length = 188364 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 343 agagctcagagcagctcccagggaac 368 |||||||||||||| ||||||||||| Sbjct: 18678 agagctcagagcagttcccagggaac 18653
>dbj|AK030881.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830440L08 product:solute carrier family 37 (glycerol-3-phosphate transporter), member 2, full insert sequence Length = 2223 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggtaa 415 |||||||||||||||||||||| Sbjct: 418 aatcccaggatttgggaggtaa 439
>gb|AC154434.2| Mus musculus BAC clone RP24-185H5 from chromosome 9, complete sequence Length = 192358 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggtaa 415 |||||||||||||||||||||| Sbjct: 17652 aatcccaggatttgggaggtaa 17673
>gb|AC117203.4| Mus musculus BAC clone RP23-251N4 from chromosome 10, complete sequence Length = 231532 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 24256 aatcccaggatttgggaggta 24236
>ref|XM_470129.1| Oryza sativa (japonica cultivar-group), mRNA Length = 916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 619 gccgccgccgccacggcgccc 599
>gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, complete sequence Length = 203922 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 109047 aatcccaggatttgggaggta 109027
>gb|AC168273.3| Mus musculus BAC RP23-184H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202998 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 136384 aatcccaggatttgggaggta 136404
>ref|XM_363348.1| Magnaporthe grisea 70-15 hypothetical protein (MG01274.4) partial mRNA Length = 1239 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgccc 93 |||||||||| |||||||||||||| Sbjct: 1146 gccgccgccgccgcctccaccgccc 1122
>gb|AY277961.1| Takifugu rubripes transcription factor Sox7 (Sox7) gene, complete cds Length = 3600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 tctgccgccgccgccacggcg 187 ||||||||||||||||||||| Sbjct: 2067 tctgccgccgccgccacggcg 2087
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 34090906 gccgccgccgccacggcgccc 34090926 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 25585976 ggccgccgccggcccctccaccgc 25585953
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 106069 aatcccaggatttgggaggta 106049
>dbj|AK033910.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330114M17 product:unclassifiable, full insert sequence Length = 3341 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 3071 aatcccaggatttgggaggta 3051
>gb|AC159987.5| Mus musculus 10 BAC RP23-475N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 172772 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 108581 aatcccaggatttgggaggta 108561
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ctgccgccgccgccacggcgc 188 ||||||||||||||||||||| Sbjct: 19160409 ctgccgccgccgccacggcgc 19160389 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 5245636 ggccgccgccggcccctccaccgc 5245613
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 34181378 gccgccgccgccacggcgccc 34181398 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 25677285 ggccgccgccggcccctccaccgc 25677262
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgcccccag 194 |||||||||||||||||||| |||| Sbjct: 21675052 gccgccgccgccacggcgccaccag 21675028 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 17973605 gccgccgccgccgcctccaccgcc 17973582 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 5364876 ccgccgccgccacggcgccc 5364857 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||||||||||||||| |||| Sbjct: 1752967 tccctctgccgccgccgccgcggc 1752990
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 54718 gccgccgccgccacggcgccc 54738
>gb|AF474922.1| Oryza sativa chalcone isomerase (Cfi) gene, complete cds Length = 2479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 1800 gccgccgccgccacggcgccc 1780
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgcccccag 194 |||||||||||||||||||| |||| Sbjct: 56449 gccgccgccgccacggcgccaccag 56425
>gb|AC116730.7| Mus musculus chromosome 1, clone RP23-346J11, complete sequence Length = 208503 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 117147 aatcccaggatttgggaggta 117127
>dbj|AK104791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F07, full insert sequence Length = 834 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 563 gccgccgccgccacggcgccc 543
>dbj|AK061390.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C05, full insert sequence Length = 877 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgccc 190 ||||||||||||||||||||| Sbjct: 593 gccgccgccgccacggcgccc 573
>gb|AC156271.5| Mus musculus 10 BAC RP24-317L8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 191073 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 14326 aatcccaggatttgggaggta 14346
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ctgccgccgccgccacggcgc 188 ||||||||||||||||||||| Sbjct: 19086636 ctgccgccgccgccacggcgc 19086616 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 5245618 ggccgccgccggcccctccaccgc 5245595
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ctgccgccgccgccacggcgc 188 ||||||||||||||||||||| Sbjct: 65570 ctgccgccgccgccacggcgc 65590
>gb|AC140425.3| Mus musculus BAC clone RP24-97E12 from 1, complete sequence Length = 187415 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 139135 aatcccaggatttgggaggta 139155
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggta 414 ||||||||||||||||||||| Sbjct: 176168 aatcccaggatttgggaggta 176148
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 167281 gccgccgccgccgcctccaccgcc 167304
>ref|NM_188746.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 495 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 56 gccgccgccggctcctccaccgcc 33
>ref|NM_188360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ctgccgccgccgccacggcg 187 |||||||||||||||||||| Sbjct: 176 ctgccgccgccgccacggcg 157
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 36135 aatcccaggatttgggaggt 36116
>ref|XM_483212.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1799 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 184 ccgccgccgccacggcgccc 165
>ref|XM_509461.1| PREDICTED: Pan troglodytes similar to SET domain-containing protein 8; H4-K20-specific histone methyltransferase (LOC452343), mRNA Length = 984 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 98 gccgccgccgccgcctccaccgcgcggg 71
>ref|XM_474085.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||| |||||||||||||||| Sbjct: 7 tccctcttccgccgccgccacggc 30
>ref|XM_465865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1761 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 161 gccgccgccgccgcctccaccgcc 138
>ref|XM_464464.1| Oryza sativa (japonica cultivar-group), mRNA Length = 976 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 550 ccgccgccgccacggcgccc 569
>ref|XM_506708.1| PREDICTED Oryza sativa (japonica cultivar-group), P0030G11.14 mRNA Length = 2311 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tccctctgccgccgccgccacggc 186 ||||||||||||||||||| |||| Sbjct: 160 tccctctgccgccgccgccgcggc 137
>ref|XM_464027.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2311 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tccctctgccgccgccgccacggc 186 ||||||||||||||||||| |||| Sbjct: 160 tccctctgccgccgccgccgcggc 137
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcgcctccaccgcccgggaa 98 |||||||||||||||||||| Sbjct: 33890 gcgcctccaccgcccgggaa 33871
>ref|NM_196678.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0016G17.7), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 1219 gccgccgccgccacggcgcc 1238
>ref|XM_530782.1| PREDICTED: Pan troglodytes LOC461699 (LOC461699), mRNA Length = 2239 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgcca 182 |||||||||||||||||||| Sbjct: 448 tccctctgccgccgccgcca 467
>ref|NM_190404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 ccgccgccggcgcctccaccgccc 93 |||||||||||||| ||||||||| Sbjct: 37 ccgccgccggcgccaccaccgccc 14
>ref|NM_192387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tctgccgccgccgccacggc 186 |||||||||||||||||||| Sbjct: 342 tctgccgccgccgccacggc 323
>ref|XM_463343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 84 gccgccgccgccgcctccaccgcc 107
>ref|NM_185228.2| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2379 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 ||||||||||||||| || ||||||||| Sbjct: 514 gccgccgccggcgccgccgccgcccggg 487
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ctaggtttgtccccatccag 234 |||||||||||||||||||| Sbjct: 1228758 ctaggtttgtccccatccag 1228777
>ref|XM_585174.2| PREDICTED: Bos taurus similar to ankyrin repeat domain protein 17 isoform a (LOC508405), mRNA Length = 6948 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 342 gccgccgccgccgcctccaccgcc 319
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 117831 aatcccaggatttgggaggt 117812
>gb|AC132355.4| Mus musculus BAC clone RP24-114M18 from chromosome 9, complete sequence Length = 192351 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 gaaatcccaggatttgggaggtaa 415 |||||||||||| ||||||||||| Sbjct: 102344 gaaatcccaggacttgggaggtaa 102321
>gb|AC068459.9| Mus musculus chromosome 12, clone RP23-158M23, complete sequence Length = 198494 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cagagcagctcccagggaac 368 |||||||||||||||||||| Sbjct: 145656 cagagcagctcccagggaac 145675
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 188476 gccgccgccgccgcctccaccgcgcggg 188449
>gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosome 9, complete sequence Length = 207340 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 gaaatcccaggatttgggaggtaa 415 |||||||||||| ||||||||||| Sbjct: 5944 gaaatcccaggacttgggaggtaa 5921
>ref|NM_015739.1| Mus musculus gastrulation brain homeobox 1 (Gbx1), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 573 gccgccgccgccgcctccaccgcc 596
>gb|AY319256.1| Mus musculus gastrulation brain homeobox 1 (Gbx1) mRNA, complete cds Length = 1643 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 927 gccgccgccgccgcctccaccgcc 950
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 116375 ggccgccgccggcccctccaccgc 116398
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 184968 aatcccaggatttgggaggt 184949
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete sequence Length = 220233 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 atcccaggatttgggaggta 414 |||||||||||||||||||| Sbjct: 106685 atcccaggatttgggaggta 106666
>gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, complete sequence Length = 131371 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgcca 182 |||||||||||||||||||| Sbjct: 57376 tccctctgccgccgccgcca 57395
>gb|AY330184.1| Euprymna scolopes Hox class homeodomain-containing protein lab mRNA, complete sequence Length = 1020 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ccgccggcgcctccaccgcccggg 96 |||||| ||||||||||||||||| Sbjct: 281 ccgccgccgcctccaccgcccggg 258
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence Length = 212687 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tttgggaggtaatccaggtatgga 427 |||||||||||||| ||||||||| Sbjct: 109084 tttgggaggtaatcaaggtatgga 109107
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 22198 gccgccgccgccgcctccaccgcgcggg 22171
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcccggg 96 ||||||||||||||| || ||||||||| Sbjct: 114960 gccgccgccggcgccgccgccgcccggg 114987
>gb|AC034108.26| Mus musculus strain 129S6/SvEvTac clone rp22-70m05 map 1, complete sequence Length = 175231 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 56835 aatcccaggatttgggaggt 56854
>gb|BC050346.1| Homo sapiens SET domain containing (lysine methyltransferase) 8, mRNA (cDNA clone MGC:51149 IMAGE:4838030), complete cds Length = 3083 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 482 gccgccgccgccgcctccaccgcgcggg 455
>gb|BT010298.1| Drosophila melanogaster LD10043 full insert cDNA Length = 2735 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctctgccgccgccgccacg 184 |||||||||||||||||||| Sbjct: 214 cctctgccgccgccgccacg 195
>gb|AF547996.1| Mus musculus gastrulation brain homeobox 1 (Gbx1) mRNA, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 573 gccgccgccgccgcctccaccgcc 596
>gb|AC137767.16| Homo sapiens 12 BAC RP13-942N8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86027 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 17816 gccgccgccgccgcctccaccgcgcggg 17843
>gb|AC093548.4| Drosophila melanogaster 3L BAC RP98-15B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171697 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cctctgccgccgccgccacg 184 |||||||||||||||||||| Sbjct: 121821 cctctgccgccgccgccacg 121840
>emb|X68325.1|SCL121A S.cereale L12-1 mRNA for ribosomal protein L12 Length = 790 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 170 gccgccgccgtcgcctccaccgcc 193
>emb|X60007.1|NSGRP2MR N.sylvestris mRNA for glycine rich protein 2 (GRP2) Length = 991 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 614 gccgccgccgccgcctccaccgcc 591
>emb|AL606805.21| Mouse DNA sequence from clone RP23-449F16 on chromosome 11 Contains the 5' end of the Lpo gene for lactoperoxidase, a novel gene, the Epx gene for eosinophil peroxidase, the Olfr462, Olfr463 and Olfr464 genes for olfactory receptors 462, 463 and 464, a novel gene, a cytochrome c oxidase subunit VIc (Cox6c) pseudogene, a ubiquitin-conjugating enzyme E2B (S. cerevisiae RAD6 homology) (Ube2b) pseudogene and the 3' end of the gene for dynein light chain 2 (6720463E02Rik), complete sequence Length = 184069 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 62493 aatcccaggatttgggaggt 62512
>gb|AY102937.1| Homo sapiens SET domain-containing protein 8 (SET8) mRNA, complete cds Length = 1928 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 69 gccgccgccgccgcctccaccgcgcggg 42
>gb|AC010012.5| Drosophila melanogaster 3L BAC RP98-22J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170466 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctctgccgccgccgccacg 184 |||||||||||||||||||| Sbjct: 162997 cctctgccgccgccgccacg 162978
>gb|AC010006.8| Drosophila melanogaster 3L BAC RP98-20A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169735 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cctctgccgccgccgccacg 184 |||||||||||||||||||| Sbjct: 140890 cctctgccgccgccgccacg 140909
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 38184 gccgccgccgccacggcgcc 38165
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tacctgagggccgccgccggcgcc 83 ||||||||||||||||||| |||| Sbjct: 2530098 tacctgagggccgccgccgccgcc 2530075 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 cgccgccggcgcctccaccgcccg 94 ||||||||||||| |||||||||| Sbjct: 543909 cgccgccggcgccgccaccgcccg 543886
>ref|NM_139460.1| Drosophila melanogaster CG9004-RA (CG9004), mRNA Length = 2709 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctctgccgccgccgccacg 184 |||||||||||||||||||| Sbjct: 220 cctctgccgccgccgccacg 201
>gb|BC108333.1| Mus musculus SET domain containing (lysine methyltransferase) 8, mRNA (cDNA clone MGC:117832 IMAGE:4978041), complete cds Length = 1903 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 64 gccgccgccgccgcctccaccgcgcggg 37
>ref|NM_030241.2| Mus musculus SET domain containing (lysine methyltransferase) 8 (Setd8), mRNA Length = 2738 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 132 gccgccgccgccgcctccaccgcgcggg 105
>ref|NM_020382.3| Homo sapiens SET domain containing (lysine methyltransferase) 8 (SETD8), mRNA Length = 2765 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 98 gccgccgccgccgcctccaccgcgcggg 71
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ctgccgccgccgccacggcgcccc 191 ||||||||||||||| |||||||| Sbjct: 3357233 ctgccgccgccgccaaggcgcccc 3357256
>gb|BC110189.1| Bos taurus cDNA clone MGC:134426 IMAGE:8059846, complete cds Length = 1924 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 113 gccgccgccgccgcctccaccgcgcggg 86
>gb|BC102818.1| Bos taurus BAI1-associated protein 2-like 2, mRNA (cDNA clone MGC:127605 IMAGE:7949397), complete cds Length = 2390 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||| |||||||||||| Sbjct: 1373 gccgccgccgccgcccccaccgcccggg 1346
>dbj|AK083416.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030004A10 product:unclassifiable, full insert sequence Length = 4718 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gaaatcccaggatttgggag 411 |||||||||||||||||||| Sbjct: 1030 gaaatcccaggatttgggag 1011
>gb|AC146885.3| Callithrix jacchus clone CH259-349L5, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ctaggtttgtccccatccag 234 |||||||||||||||||||| Sbjct: 73850 ctaggtttgtccccatccag 73869
>dbj|AK030904.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830452G14 product:PR/SET DOMAIN-CONTAINING PROTEIN 07 homolog [Homo sapiens], full insert sequence Length = 2715 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||||||||||| |||| Sbjct: 125 gccgccgccgccgcctccaccgcgcggg 98
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||| |||||||||||||||| Sbjct: 32792885 tccctcttccgccgccgccacggc 32792908 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcccggg 96 ||||||||||||||| || ||||||||| Sbjct: 21301486 gccgccgccggcgccgccgccgcccggg 21301513
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 2160229 gccgccgccggctcctccaccgcc 2160252
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 15184485 gccgccgccgccacggcgcc 15184466
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 4581314 gccgccgccggcccctccaccgcc 4581337
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 24830631 ccgccgccgccacggcgccc 24830612 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 7982580 gccgccgccgccgcctccaccgcc 7982603
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 26947912 gccgccgccgccacggcgcc 26947931
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ccgccgccggcgcctccaccgccc 93 |||||||||||||| ||||||||| Sbjct: 35311985 ccgccgccggcgccaccaccgccc 35312008 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 22033023 gccgccgccgccgcctccaccgcc 22033046 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 8001955 gccgccgccggctcctccaccgcc 8001978
>gb|AC023162.41| Homo sapiens 3 BAC RP11-263I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95579 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||| |||||||||||| Sbjct: 55082 gccgccgccgccgccgccaccgcccggg 55055
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 93098 gccgccgccgccacggcgcc 93079
>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete sequence Length = 210141 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 179458 aatcccaggatttgggaggt 179477
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 55373 aatcccaggatttgggaggt 55392
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 108267 gccgccgccggctcctccaccgcc 108290
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 131432 ccgccgccgccacggcgccc 131413
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 54750 gccgccgccgccgcctccaccgcc 54773
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 12390 gccgccgccgccacggcgcc 12409
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ccgccgccggcgcctccaccgccc 93 |||||||||||||| ||||||||| Sbjct: 75846 ccgccgccggcgccaccaccgccc 75869
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 18457 ccgccgccgccacggcgccc 18438
>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10 Length = 124344 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 44536 gccgccgccgccgcctccaccgcc 44559
>dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129G05 Length = 132535 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 114831 gccgccgccgccgcctccaccgcc 114854
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||||||||||||||| |||| Sbjct: 70979 tccctctgccgccgccgccgcggc 71002
>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0681H07 Length = 144722 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 34183 gccgccgccggcccctccaccgcc 34206
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 124688 gccgccgccggcccctccaccgcc 124711
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 96503 gccgccgccgccacggcgcc 96522
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 91179 ccgccgccgccacggcgccc 91160
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 35199 gccgccgccgccgcctccaccgcc 35176
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 35077 ccgccgccgccacggcgccc 35058
>dbj|AK111127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C08, full insert sequence Length = 579 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 255 gccgccgccggctcctccaccgcc 232
>dbj|AK108729.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D01, full insert sequence Length = 976 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 550 ccgccgccgccacggcgccc 569
>dbj|AK105444.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-A11, full insert sequence Length = 1799 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccgccgccgccacggcgccc 190 |||||||||||||||||||| Sbjct: 184 ccgccgccgccacggcgccc 165
>dbj|AK100898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131C20, full insert sequence Length = 2322 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tccctctgccgccgccgccacggc 186 ||||||||||||||||||| |||| Sbjct: 171 tccctctgccgccgccgccgcggc 148
>dbj|AK101087.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024K07, full insert sequence Length = 2723 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||| |||||||||||||||| Sbjct: 63 tccctcttccgccgccgccacggc 86
>dbj|AK100163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021D15, full insert sequence Length = 1761 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 161 gccgccgccgccgcctccaccgcc 138
>dbj|AK072646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129P11, full insert sequence Length = 2324 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tccctctgccgccgccgccacggc 186 ||||||||||||||||||| |||| Sbjct: 171 tccctctgccgccgccgccgcggc 148
>dbj|AK072261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O12, full insert sequence Length = 1763 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||| |||||||||||||||| Sbjct: 98 tccctcttccgccgccgccacggc 121
>dbj|AK070492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B11, full insert sequence Length = 2092 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 ccgccgccggcgcctccaccgccc 93 |||||||||||||| ||||||||| Sbjct: 90 ccgccgccggcgccaccaccgccc 67
>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete sequence Length = 91539 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||| |||||||||||||||| Sbjct: 64221 tccctcttccgccgccgccacggc 64244
>gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 of 83 of the complete sequence Length = 312072 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctctgccgccgccgccacg 184 |||||||||||||||||||| Sbjct: 221069 cctctgccgccgccgccacg 221050
>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete sequence Length = 171451 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gctcagagcagctcccaggg 365 |||||||||||||||||||| Sbjct: 164236 gctcagagcagctcccaggg 164255
>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete sequence Length = 216807 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gctcagagcagctcccaggg 365 |||||||||||||||||||| Sbjct: 109693 gctcagagcagctcccaggg 109712
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||| |||||||||||| Sbjct: 154330 gccgccgccgccgccgccaccgcccggg 154303
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gccgccgccgccacggcgcc 189 |||||||||||||||||||| Sbjct: 15192726 gccgccgccgccacggcgcc 15192707
>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence Length = 182659 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 11765 gccgccgccgccgcctccaccgcc 11788
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 2168010 gccgccgccggctcctccaccgcc 2168033
>emb|AL731879.5|CNS08C8K Oryza sativa chromosome 12, . BAC OSJNBb0016I13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150192 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 39876 ggccgccgccggcccctccaccgc 39853
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ggccgccgccggcgcctccaccgc 91 ||||||||||||| |||||||||| Sbjct: 17962 ggccgccgccggcccctccaccgc 17985
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccctctgccgccgccgccacggc 186 ||||||| |||||||||||||||| Sbjct: 55171 tccctcttccgccgccgccacggc 55194
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||||| ||||||||||| Sbjct: 56923 gccgccgccggctcctccaccgcc 56946
>emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from BAC 344J2 map 3q21 region D3S3607-D3S1587, complete sequence Length = 98356 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||| |||||||||||| Sbjct: 49766 gccgccgccgccgccgccaccgcccggg 49793
>gb|AC151719.3| Mus musculus BAC clone RP23-147H4 from chromosome 5, complete sequence Length = 221314 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 41324 aatcccaggatttgggaggt 41305
>gb|AC034109.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-88k7, complete sequence Length = 227773 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 170811 aatcccaggatttgggaggt 170792
>gb|AC024069.29| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence Length = 242808 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 128594 aatcccaggatttgggaggt 128613
>gb|AC068906.14| Mus musculus strain C57BL/6J chromosome 1 clone rp23-240p23, complete sequence Length = 192366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 170811 aatcccaggatttgggaggt 170792
>gb|AC024915.24| Mus musculus C57CL/6J RPCI-23, complete sequence Length = 225646 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 128592 aatcccaggatttgggaggt 128611
>gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome 12, complete sequence Length = 236362 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cagagcagctcccagggaac 368 |||||||||||||||||||| Sbjct: 230891 cagagcagctcccagggaac 230872
>gb|S70397.1|S70397 {FRA16A, folate-sensitive fragile site} [human, Genomic, 160 nt] Length = 160 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gccgccgccggcgcctccaccgcc 92 |||||||||| ||||||||||||| Sbjct: 104 gccgccgccgccgcctccaccgcc 127
>gb|AC125212.3| Mus musculus BAC clone RP23-131D6 from chromosome 5, complete sequence Length = 215413 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aatcccaggatttgggaggt 413 |||||||||||||||||||| Sbjct: 51939 aatcccaggatttgggaggt 51958
>ref|NM_001035498.1| Bos taurus BAI1-associated protein 2-like 2 (BAIAP2L2), mRNA Length = 2390 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 gccgccgccggcgcctccaccgcccggg 96 |||||||||| |||| |||||||||||| Sbjct: 1373 gccgccgccgccgcccccaccgcccggg 1346
>emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chromosome X, complete sequence Length = 200875 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 tcccaggatttgggaggtaa 415 |||||||||||||||||||| Sbjct: 6298 tcccaggatttgggaggtaa 6279
>emb|AL606903.8| Mouse DNA sequence from clone RP23-278I3 on chromosome 4, complete sequence Length = 175238 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gaaatcccaggatttgggag 411 |||||||||||||||||||| Sbjct: 151689 gaaatcccaggatttgggag 151670
>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gggccgccgccggcgcctcc 86 |||||||||||||||||||| Sbjct: 59767 gggccgccgccggcgcctcc 59786 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,554,729 Number of Sequences: 3902068 Number of extensions: 3554729 Number of successful extensions: 106642 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102590 Number of HSP's gapped (non-prelim): 4052 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
