>dbj|AK120161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030P08, full
           insert sequence
          Length = 2364

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 121 gcgggaagcggaggccgccgccgctccatctggtatttgaagtggacgagga 172
           ||||| |||||||||||||||||||| ||| ||  |||||||||||||||||
Sbjct: 145 gcggggagcggaggccgccgccgctcgatccgggttttgaagtggacgagga 196

>dbj|AK072405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080M15, full
           insert sequence
          Length = 2282

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 121 gcgggaagcggaggccgccgccgctccatctggtatttgaagtggacgagga 172
           ||||| |||||||||||||||||||| ||| ||  |||||||||||||||||
Sbjct: 147 gcggggagcggaggccgccgccgctcgatccgggttttgaagtggacgagga 198



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 261 gtggagcttgattctgcagtgttccaagtgtccttgaccaaaaacaggtatgaggcaatt 320
           |||||||||||||||||||| |||||||| ||||   || | ||||| || |||||||||
Sbjct: 311 gtggagcttgattctgcagtcttccaagtatcctcagcccagaacagatacgaggcaatt 370

                
Query: 321 gcttg 325
           |||||
Sbjct: 371 gcttg 375

>dbj|AK060756.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-H02, full
           insert sequence
          Length = 3611

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 261 gtggagcttgattctgcagtgttccaagtgtccttgaccaaaaacaggtatgaggcaatt 320
           |||||||||||||||||||| |||||||| ||||   || | ||||| || |||||||||
Sbjct: 68  gtggagcttgattctgcagtcttccaagtatcctcagcccagaacagatacgaggcaatt 127

                
Query: 321 gcttg 325
           |||||
Sbjct: 128 gcttg 132

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 261      gtggagcttgattctgcagtgttccaagtgtcct 294
                |||||||||||||||||||| |||||||| ||||
Sbjct: 12129788 gtggagcttgattctgcagtcttccaagtatcct 12129755



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 121      gcgggaagcggaggccgccgccgctc 146
                ||||| ||||||||||||||||||||
Sbjct: 12130585 gcggggagcggaggccgccgccgctc 12130560

>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0076E06, from chromosome 3, complete sequence
          Length = 126323

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 261   gtggagcttgattctgcagtgttccaagtgtcct 294
             |||||||||||||||||||| |||||||| ||||
Sbjct: 22397 gtggagcttgattctgcagtcttccaagtatcct 22364



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 121   gcgggaagcggaggccgccgccgctc 146
             ||||| ||||||||||||||||||||
Sbjct: 23194 gcggggagcggaggccgccgccgctc 23169

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 261      gtggagcttgattctgcagtgttccaagtgtcct 294
                |||||||||||||||||||| |||||||| ||||
Sbjct: 12126551 gtggagcttgattctgcagtcttccaagtatcct 12126518



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 121      gcgggaagcggaggccgccgccgctc 146
                ||||| ||||||||||||||||||||
Sbjct: 12127348 gcggggagcggaggccgccgccgctc 12127323

>gb|AY020351.1| Oryza sativa microsatellite MRG2676 containing (GA)X14, closest to
           marker RG745, genomic sequence
          Length = 228

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 121 gcgggaagcggaggccgccgccgctc 146
           ||||| ||||||||||||||||||||
Sbjct: 187 gcggggagcggaggccgccgccgctc 212

>ref|XM_542793.2| PREDICTED: Canis familiaris similar to ring finger protein 184
           (LOC485673), mRNA
          Length = 3025

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 127 agcggaggccgccgccgctcc 147
           |||||||||||||||||||||
Sbjct: 557 agcggaggccgccgccgctcc 537

>emb|AL671967.1| Human DNA sequence from clone RP11-544L8 on chromosome 6 Contains the
             3' end of the HDAC2 gene for histone deacetylase 2 (human
             transcriptional regulator homolog RPD3, YAF1) and a
             putative novel gene, complete sequence
          Length = 66165

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   gttgtgggcaaaatggagaggagag 249
             |||||||||||||||| ||||||||
Sbjct: 58896 gttgtgggcaaaatggtgaggagag 58920

>dbj|AB234902.1| Verbena x hybrida mRNA for Cinnamic acid 4-hydroxylase, complete
           cds, cultivar: Tapien Pink
          Length = 1768

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 gggaagcggaggccgccgccg 143
           |||||||||||||||||||||
Sbjct: 504 gggaagcggaggccgccgccg 524

>dbj|AB209190.1| Homo sapiens mRNA for histone deacetylase 2 variant protein
          Length = 4810

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 225  gttgtgggcaaaatggagaggagag 249
            |||||||||||||||| ||||||||
Sbjct: 1380 gttgtgggcaaaatggtgaggagag 1356

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    tggcgacgtggagcttgatt 273
              ||||||||||||||||||||
Sbjct: 993413 tggcgacgtggagcttgatt 993432

>ref|XM_366864.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
            (MG02940.4) partial mRNA
          Length = 1539

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 121  gcgggaagcggaggccgccgccgc 144
            ||||||||| ||||||||||||||
Sbjct: 1083 gcgggaagccgaggccgccgccgc 1106

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 252     gctggcgacgtggagcttga 271
               ||||||||||||||||||||
Sbjct: 3946026 gctggcgacgtggagcttga 3946045

>emb|AL359637.14| Human DNA sequence from clone RP11-484M8 on chromosome 13, complete
             sequence
          Length = 174135

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ctataaaaattgtagtatag 203
             ||||||||||||||||||||
Sbjct: 17766 ctataaaaattgtagtatag 17785

>gb|AC018711.4| Homo sapiens BAC clone RP11-324K4 from 1, complete sequence
          Length = 167334

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 292   ccttgaccaaaaacaggtatgagg 315
             ||||||||||| ||||||||||||
Sbjct: 63113 ccttgaccaaacacaggtatgagg 63136

>gb|AC093422.3| Homo sapiens chromosome 1 clone RP11-383G10, complete sequence
          Length = 180872

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 292    ccttgaccaaaaacaggtatgagg 315
              ||||||||||| ||||||||||||
Sbjct: 124848 ccttgaccaaacacaggtatgagg 124825

>gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, complete sequence
          Length = 174714

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   ctgctccagggaaaaaaggg 48
            ||||||||||||||||||||
Sbjct: 8097 ctgctccagggaaaaaaggg 8078

>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence
          Length = 180623

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ctgctccagggaaaaaaggg 48
             ||||||||||||||||||||
Sbjct: 99431 ctgctccagggaaaaaaggg 99412

>gb|AY142756.1| Heliobacillus mobilis Carbamoyl-phosphate synthase large chain gene,
            partial cds
          Length = 3249

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   ccactcgctgcaactgctcc 35
            ||||||||||||||||||||
Sbjct: 2967 ccactcgctgcaactgctcc 2986

>gb|AF443213.1| Fusarium graminearum dsRNA mycovirus-1 clone pDK-1 sequence
          Length = 825

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 aagtgtccttgaccaaaaac 305
           ||||||||||||||||||||
Sbjct: 180 aagtgtccttgaccaaaaac 161

>dbj|AB058947.1| Streptomyces albulus plasmid pNO33 DNA, complete sequence
          Length = 36955

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   tgcgggaagcggaggccgccgccg 143
             |||||||||||| |||||||||||
Sbjct: 29209 tgcgggaagcggtggccgccgccg 29186

>gb|AY533037.1| Fusarium graminearum dsRNA mycovirus-1 strain DK-21, complete genome
          Length = 6624

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  aagtgtccttgaccaaaaac 305
            ||||||||||||||||||||
Sbjct: 1371 aagtgtccttgaccaaaaac 1352

>gb|AC005304.1|AC005304 Homo sapiens chromosome 17, clone hRPK.131_K_5, complete sequence
          Length = 164017

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   agtagcatctggtccttttg 366
             ||||||||||||||||||||
Sbjct: 68882 agtagcatctggtccttttg 68863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,572,017
Number of Sequences: 3902068
Number of extensions: 3572017
Number of successful extensions: 63200
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63002
Number of HSP's gapped (non-prelim): 196
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)