Clone Information

BLAST Search Result

Clone Name	bastl40f06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2...	35	0.072
2	BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3...	34	0.16
3	PIAP_PIG (O62640) Putative inhibitor of apoptosis	33	0.27
4	DAPA_XANCP (Q8P9V6) Dihydrodipicolinate synthase (EC 4.2.1.52) (...	33	0.36
5	DAPA_XANAC (Q8PLN5) Dihydrodipicolinate synthase (EC 4.2.1.52) (...	33	0.36
6	UNK_DROME (Q86B79) Protein unkempt	33	0.36
7	RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)	33	0.36
8	BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibit...	33	0.36
9	BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3...	33	0.36
10	BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8...	32	0.61
11	BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2...	32	0.61
12	EPAS1_HUMAN (Q99814) Endothelial PAS domain-containing protein 1...	32	1.0
13	GUN_CELUD (P18336) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,...	31	1.8
14	BIRC8_GORGO (Q95M71) Baculoviral IAP repeat-containing protein 8...	30	2.3
15	COX5A_CAEEL (P55954) Cytochrome c oxidase polypeptide Va, mitoch...	30	2.3
16	SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein...	30	2.3
17	LRSM1_HUMAN (Q6UWE0) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-...	30	2.3
18	BIRC4_HUMAN (P98170) Baculoviral IAP repeat-containing protein 4...	30	2.3
19	BIRC8_PANTR (Q95M72) Baculoviral IAP repeat-containing protein 8...	30	3.0
20	RNF34_BOVIN (Q5E9J6) RING finger protein 34	30	3.0
21	RNF34_PONPY (Q5NVC7) RING finger protein 34	30	3.0
22	RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein...	30	3.0
23	BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7...	30	3.0
24	BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (...	30	3.9
25	RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein...	30	3.9
26	GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4) (Endo...	30	3.9
27	RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein M...	30	3.9
28	SSA27_MOUSE (P56873) Sjoegren syndrome/scleroderma autoantigen 1...	30	3.9
29	BIRC4_MOUSE (Q60989) Baculoviral IAP repeat-containing protein 4...	29	5.1
30	MSC3_CANGA (Q6FX33) Meiotic sister-chromatid recombination prote...	29	6.7
31	LRSM1_MOUSE (Q80ZI6) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-...	29	6.7
32	RFFL_RAT (Q8CIN9) Rififylin (RING finger and FYVE-like domain-co...	29	6.7
33	DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysi...	29	6.7
34	METX_PSEAE (P57714) Homoserine O-acetyltransferase (EC 2.3.1.31)...	29	6.7
35	RFFL_HUMAN (Q8WZ73) Rififylin (RING finger and FYVE-like domain-...	29	6.7
36	IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)	29	6.7
37	PDXS_BACCI (Q8L1A8) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-)	29	6.7
38	RFFL_MOUSE (Q6ZQM0) Rififylin (RING finger and FYVE-like domain-...	29	6.7
39	HRPI_PSESY (P35655) Hypersensitivity response secretion protein ...	29	6.7
40	YHJU_ECOLI (P37659) Hypothetical protein yhjU	25	8.4
41	NEB2_HUMAN (Q96SB3) Neurabin-2 (Neurabin-II) (Spinophilin) (Prot...	28	8.7
42	IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)	28	8.7
43	ZAN_RABIT (P57999) Zonadhesin (Fragment)	28	8.7

>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of|
           apoptosis protein 2) (MIAP2) (MIAP-2)
          Length = 612

 Score = 35.4 bits (80), Expect = 0.072
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +3

Query: 234 YDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAEC 410
           Y++  V+  ++ + + D+  LS E ++   +  R    C  R V  V   CGH  +C EC
Sbjct: 530 YENLFVEKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQEC 589

Query: 411 S---QRCDVC 431
           +   ++C +C
Sbjct: 590 APSLRKCPIC 599

to top

>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of|
           apoptosis protein 1) (MIAP1) (MIAP-1)
          Length = 600

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
 Frame = +3

Query: 225 PPKYDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLC 401
           P  Y    VQ  +  L + D+  L  E ++   +  R    C  R V  V   CGH  +C
Sbjct: 515 PALYRDIFVQQDIRSLPTDDIAALPMEEQLRKLQEERMCKVCMDREVSIVFIPCGHLVVC 574

Query: 402 AECS---QRCDVC 431
            +C+   ++C +C
Sbjct: 575 KDCAPSLRKCPIC 587

to top

>PIAP_PIG (O62640) Putative inhibitor of apoptosis|
          Length = 358

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +3

Query: 225 PPKYDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLC 401
           P  Y    VQ  ++ + + ++ +LS E ++   +  R    C  + V  V   CGH  +C
Sbjct: 273 PMLYKHLFVQQDIKYIPTENVSDLSMEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVC 332

Query: 402 AECS---QRCDVC 431
            +C+   ++C +C
Sbjct: 333 KDCAPSLRKCPIC 345

to top

>DAPA_XANCP (Q8P9V6) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 165 QAAGAGEGLRMEALPSSPRHPPKYDS-AAVQNALEQLASIDLI 290
           Q AG G GLR+  LP S  H P  D  AA   ALE L+S +++
Sbjct: 258 QRAGIGHGLRLPLLPLSAAHQPAADRLAANAVALEALSSREML 300

to top

>DAPA_XANAC (Q8PLN5) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 165 QAAGAGEGLRMEALPSSPRHPPKYDS-AAVQNALEQLASIDLI 290
           Q AG G GLR+  LP S  H P  D  AA   ALE L+S +++
Sbjct: 258 QRAGIGHGLRLPLLPLSAAHQPAADRLAADAIALEALSSREML 300

to top

>UNK_DROME (Q86B79) Protein unkempt|
          Length = 599

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +3

Query: 261 LEQLAS---IDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLCAECSQRCDVC 431
           L+QL S    DL E+ K   +E+ +         R V   L  C H S+C  C++    C
Sbjct: 530 LKQLQSKLRTDLEEVDKVLYLENAKKCMKCEENNRTV--TLEPCNHLSICNTCAESVTEC 587

Query: 432 PFAEV 446
           P+ +V
Sbjct: 588 PYCQV 592

to top

>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)|
          Length = 943

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
 Frame = +3

Query: 243  AAVQNALEQLASID-------LIELSKEARIEHCRATRDLSSCGRYVQH----VLNSCGH 389
            ++  N L+Q+ SI        L+ L KE         +D +SC     +    VL  C H
Sbjct: 860  SSFHNGLKQIGSIKDQRYLNRLVSLEKEKD-----QLKDQNSCVICASNPPNIVLLPCRH 914

Query: 390  ASLCAECSQRCDVCPFAEVH 449
            +SLC++C  +   CP    H
Sbjct: 915  SSLCSDCCSKLTKCPICRSH 934

to top

>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell|
           apoptosis protein)
          Length = 611

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +3

Query: 225 PPKYDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLC 401
           P  Y    V+ +++ + + D+  L  E ++   +  R    C  + V  V   CGH  +C
Sbjct: 526 PVLYKDLFVEKSMKYVPTEDVSGLPMEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVC 585

Query: 402 AECS---QRCDVC 431
            EC+   ++C +C
Sbjct: 586 KECAPSLRKCPIC 598

to top

>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of|
           apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2)
           (TNFR2-TRAF signaling complex protein 1) (IAP homolog C)
           (Apoptosis inhibitor 2) (API2)
          Length = 604

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +3

Query: 234 YDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAEC 410
           Y+   VQ  ++ + + D+ +L  E ++   +  R    C  + V  V   CGH  +C +C
Sbjct: 522 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC 581

Query: 411 S---QRCDVC 431
           +   ++C +C
Sbjct: 582 APSLRKCPIC 591

to top

>BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8 (Inhibitor of|
           apoptosis-like protein 2) (IAP-like protein 2) (ILP-2)
           (Testis-specific inhibitor of apoptosis)
          Length = 236

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 ELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAECSQRCDVCP 434
           E+S E  +   +  +    C  RY+  V   CGH   C +C++  D CP
Sbjct: 173 EISPEEPLRRLQEEKLCKICMDRYIAVVFIPCGHLVTCKQCAEAVDRCP 221

to top

>BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2 (Inhibitor of|
           apoptosis protein 2) (HIAP2) (HIAP-2) (C-IAP1)
           (TNFR2-TRAF signaling complex protein 2) (IAP homolog B)
          Length = 618

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 234 YDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAEC 410
           Y +  V   ++ + + D+  LS E ++   +  R    C  + V  V   CGH  +C EC
Sbjct: 536 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC 595

Query: 411 S---QRCDVC 431
           +   ++C +C
Sbjct: 596 APSLRKCPIC 605

to top

>EPAS1_HUMAN (Q99814) Endothelial PAS domain-containing protein 1 (EPAS-1)|
           (Member of PAS protein 2) (MOP2) (Hypoxia-inducible
           factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1
           alpha-like factor) (HLF)
          Length = 870

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 12/81 (14%)
 Frame = -3

Query: 324 GSAQF*PPCSAQ*D------------QWTPTAPKHSGRRRCRTWEGASATKGAPPSASPL 181
           GS    PPC  Q              QW P  P H G  +    +  +   GA P   P+
Sbjct: 612 GSKASLPPCCGQASTPLSSMGGRSNTQWPPDPPLHFGPTKWAVGDQRTEFLGAAPLGPPV 671

Query: 180 QHPRLATASTVATGGACGSRG 118
             P ++T  T +  G  G+RG
Sbjct: 672 SPPHVSTFKTRSAKG-FGARG 691

to top

>GUN_CELUD (P18336) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 359

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 211 RRRGTLPSTTAPPSRMLWSSWRPLISLS*ARRLELSTAVQL 333
           RRR T      PP+   WS WR  IS S    L++S  V L
Sbjct: 307 RRRLTTRMIITPPASSCWSGWRNRISASAVMALQVSQPVCL 347

to top

>BIRC8_GORGO (Q95M71) Baculoviral IAP repeat-containing protein 8 (Inhibitor of|
           apoptosis-like protein 2) (IAP-like protein 2) (ILP-2)
          Length = 236

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 ELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAECSQRCDVCP 434
           E+S E  +   +  +    C  R++  V   CGH   C +C++  D CP
Sbjct: 173 EISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCP 221

to top

>COX5A_CAEEL (P55954) Cytochrome c oxidase polypeptide Va, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 174

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 228 PKYDSAAVQNALEQLASIDLIELSK--EARIEHCRATRDLSSCGRYVQHVLNSCG 386
           P+ D   V+ AL +L   D+I   K  EA +  CR   D +   R+++ +   CG
Sbjct: 55  PEIDGWEVRKALSELHDYDVIPDPKVVEAALRACRRVNDFALAVRFLEAIKIKCG 109

to top

>SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein CG13030 (EC|
           6.3.2.-)
          Length = 351

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
 Frame = +3

Query: 120 PASRTHRP*PRLMR*QAAGAGEGLRMEALPSSPRHPPKYDSAAVQNALEQLASIDLIELS 299
           P   TH    +     AA AGE      +PS  +     DS AVQ+ +     +D     
Sbjct: 45  PEETTHVVVVKRQSPDAAAAGE-----LVPSRRK-----DSVAVQSGIVATGPLDTTRSG 94

Query: 300 KEARIEHCRATRDLSSCGRYVQHVLNSC--GHASLCAECSQRCDVCPFAEV 446
             AR +   A  +   C  Y+   +  C  GH  +C+ C  +  +CP   V
Sbjct: 95  --ARDDFLMALLECPVCFGYIMPPIMQCPRGHL-ICSTCRSKLTICPVCRV 142

to top

>LRSM1_HUMAN (Q6UWE0) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich|
           repeat and sterile alpha motif-containing protein 1)
           (Tsg101-associated ligase) (hTAL)
          Length = 723

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +3

Query: 207 PSSPRHPPKYDSAAVQNA-LEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSC 383
           P++P+ PP+    +   A LE  AS  ++ L +EA                  Q +  +C
Sbjct: 649 PTAPQEPPESVRPSAPPAELEVQASECVVCLEREA------------------QMIFLNC 690

Query: 384 GHASLCAECSQRCDVCP 434
           GH   C +C Q    CP
Sbjct: 691 GHVCCCQQCCQPLRTCP 707

to top

>BIRC4_HUMAN (P98170) Baculoviral IAP repeat-containing protein 4 (Inhibitor of|
           apoptosis protein 3) (X-linked inhibitor of apoptosis
           protein) (X-linked IAP) (IAP-like protein) (HILP)
          Length = 497

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 ELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAECSQRCDVCP 434
           E+S E ++   +  +    C  R +  V   CGH   C +C++  D CP
Sbjct: 434 EISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCP 482

to top

>BIRC8_PANTR (Q95M72) Baculoviral IAP repeat-containing protein 8 (Inhibitor of|
           apoptosis-like protein 2) (IAP-like protein 2) (ILP-2)
          Length = 236

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 ELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAECSQRCDVCP 434
           E+S E  +   +  +    C  R++  V   CGH   C +C++  D CP
Sbjct: 173 EISPEEPLRRLQDEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCP 221

to top

>RNF34_BOVIN (Q5E9J6) RING finger protein 34|
          Length = 375

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 252 QNALEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLCAECSQRCDVC 431
           +N   Q +  + ++L  E     CR   D       +  VL  CGH   C +C +R   C
Sbjct: 305 ENEENQKSYGERLQLQDEEDDSLCRICMDA-----VIDCVLLECGHMVTCTKCGKRMSEC 359

Query: 432 P 434
           P
Sbjct: 360 P 360

to top

>RNF34_PONPY (Q5NVC7) RING finger protein 34|
          Length = 372

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 252 QNALEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLCAECSQRCDVC 431
           +N   Q +  + ++L  E     CR   D       +  VL  CGH   C +C +R   C
Sbjct: 302 ENEENQKSYGERLQLQDEEDDSLCRICMDA-----VIDCVLLECGHMVTCTKCGKRMSEC 356

Query: 432 P 434
           P
Sbjct: 357 P 357

to top

>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)|
           (FYVE-RING finger protein Momo) (Human RING finger
           homologous to inhibitor of apoptosis protein) (hRFI)
           (Caspases-8 and -10-associated RING finger protein 1)
           (CARP-1) (Caspase regulat
          Length = 372

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 252 QNALEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLCAECSQRCDVC 431
           +N   Q +  + ++L  E     CR   D       +  VL  CGH   C +C +R   C
Sbjct: 302 ENEENQKSYGERLQLQDEEDDSLCRICMDA-----VIDCVLLECGHMVTCTKCGKRMSEC 356

Query: 432 P 434
           P
Sbjct: 357 P 357

to top

>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney|
           inhibitor of apoptosis protein) (KIAP) (Melanoma
           inhibitor of apoptosis protein) (ML-IAP) (Livin)
          Length = 298

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +3

Query: 192 RMEALPSSPRHPPKYDSAAVQNA---LEQLASIDLIELSKEARIEHCRATRDLSSC-GRY 359
           R E    S + P     A  Q A   LE   + D+     EA++   +  R    C  R 
Sbjct: 205 RREVQSESAQEPGGVSPAEAQRAWWVLEPPGARDV-----EAQLRRLQEERTCKVCLDRA 259

Query: 360 VQHVLNSCGHASLCAECSQRCDVCP 434
           V  V   CGH  +CAEC+    +CP
Sbjct: 260 VSIVFVPCGHL-VCAECAPGLQLCP 283

to top

>BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (Inhibitor of|
           apoptosis protein 3) (X-linked inhibitor of apoptosis
           protein) (X-linked IAP) (IAP homolog A) (RIAP3) (RIAP-3)
          Length = 496

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 240 SAAVQNALEQLASIDLI-ELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAECS 413
           SA   N+ ++ +   L  ++S E ++   +  +    C  R +  V   CGH   C +C+
Sbjct: 415 SAQKDNSQDESSQTSLQKDISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA 474

Query: 414 QRCDVCP 434
           +  D CP
Sbjct: 475 EAVDKCP 481

to top

>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)|
           (Phafin-1)
          Length = 376

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 252 QNALEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLCAECSQRCDVC 431
           +N   Q +  + ++L  E     CR   D       +  VL  CGH   C +C +R   C
Sbjct: 306 ENEENQKSYGERMQLQDEEDDSLCRICMDA-----VIDCVLLECGHMVTCTKCGKRMSEC 360

Query: 432 P 434
           P
Sbjct: 361 P 361

to top

>GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4)|
            (Endo-1,4-beta-glucanase C) (Cellulase C)
          Length = 1101

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
 Frame = -2

Query: 319  CSILASLLSSMRSMDANCSKAFWTAALSYLGGCLGDEGSASIRKPSPAPAACYRINRGYG 140
            C+  A  +  +++   N     W +ALS++   + D+GSA      P P A     +   
Sbjct: 874  CAPSACYVDEIQAWSTNELTVNWNSALSWVASWVADQGSA-----EPVPTAPVVTRQPVD 928

Query: 139  RCVRLAGD------RAGAPAKEVE---EPGREWR 65
              V L  D       +G PA  V      GR W+
Sbjct: 929  ATVALGADATFTAEASGVPAPTVRWQVRAGRGWK 962

to top

>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)|
          Length = 381

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 252 QNALEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLCAECSQRCDVC 431
           +N   Q +  + ++L  E     CR   D       +  VL  CGH   C +C +R   C
Sbjct: 311 ENEENQKSYGERMQLQDEEDDSLCRICMDA-----VIDCVLLECGHMVTCTKCGKRMSEC 365

Query: 432 P 434
           P
Sbjct: 366 P 366

to top

>SSA27_MOUSE (P56873) Sjoegren syndrome/scleroderma autoantigen 1 homolog|
           (Autoantigen p27 homolog) (Protein C184L)
          Length = 199

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +3

Query: 108 PARSPASRTHRP*PRLMR*QAAGAGEGLRMEALPSSPRHPPKYDS-AAVQNALEQLASID 284
           PA S    +  P PR       GA  GL+    P  P  PP  D+ A+ Q AL Q  +  
Sbjct: 107 PASSSRPPSQPPVPRPEH--CEGAAAGLKAAQAPPLPAAPPNTDAVASTQTALLQKLTWA 164

Query: 285 LIELSKEARIE 317
            +EL     +E
Sbjct: 165 SVELGSSTSLE 175

to top

>BIRC4_MOUSE (Q60989) Baculoviral IAP repeat-containing protein 4 (Inhibitor of|
           apoptosis protein 3) (X-linked inhibitor of apoptosis
           protein) (X-linked IAP) (IAP homolog A) (MIAP3) (MIAP-3)
          Length = 496

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 ELSKEARIEHCRATRDLSSC-GRYVQHVLNSCGHASLCAECSQRCDVCP 434
           ++S E ++   +  +    C  R +  V   CGH   C +C++  D CP
Sbjct: 433 DISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCP 481

to top

>MSC3_CANGA (Q6FX33) Meiotic sister-chromatid recombination protein 3|
          Length = 834

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 228 EGASATKGAPPSASPLQHPRLATASTVATGGACGS 124
           +   A  G  P     +H  +ATA+T ATGG  G+
Sbjct: 778 DAVDALSGHVPFEEATRHASVATAATAATGGTTGT 812

to top

>LRSM1_MOUSE (Q80ZI6) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich|
           repeat and sterile alpha motif-containing protein 1)
           (Tsg101-associated ligase)
          Length = 727

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 354 RYVQHVLNSCGHASLCAECSQRCDVCP 434
           R  Q V  +CGH   C +C Q    CP
Sbjct: 685 REAQMVFLTCGHVCCCQQCCQPLRTCP 711

to top

>RFFL_RAT (Q8CIN9) Rififylin (RING finger and FYVE-like domain-containing|
           protein 1) (FYVE-RING finger protein Sakura)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 369 VLNSCGHASLCAECSQRCDVCP 434
           VL  CGH   C +C +R + CP
Sbjct: 326 VLLECGHMVTCTKCGKRMNECP 347

to top

>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
           (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
           (H3-K79-HMTase) (DOT1-like protein)
          Length = 1739

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = -2

Query: 208 GSASIRKPSPAPAACYRINRGYGRCVRLAGDRAGAPAK 95
           G+A+++KPSP+ A   ++N+  GR  ++AG + G P K
Sbjct: 382 GAATVKKPSPSKARKKKLNK-KGR--KMAGRKRGRPKK 416

to top

>METX_PSEAE (P57714) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 379

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 265 SKAFWTAALSYLGGCLGDEGSASIRKPSPAPAACY 161
           ++ F+  AL+ LGGC G  G ASI   +PA    Y
Sbjct: 91  TRKFFVVALNNLGGCNGSSGPASI---NPATGKVY 122

to top

>RFFL_HUMAN (Q8WZ73) Rififylin (RING finger and FYVE-like domain-containing|
           protein 1) (FYVE-RING finger protein Sakura) (Fring)
           (Caspases-8 and -10-associated RING finger protein 2)
           (CARP-2) (Caspase regulator CARP2) (RING finger protein
           189) (RING finge
          Length = 363

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 369 VLNSCGHASLCAECSQRCDVCP 434
           VL  CGH   C +C +R + CP
Sbjct: 327 VLLECGHMVTCTKCGKRMNECP 348

to top

>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)|
          Length = 249

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 381 CGHASLCAECSQRCDVC 431
           C H ++C ECS+RC  C
Sbjct: 217 CRHLAVCTECSRRCKRC 233

to top

>PDXS_BACCI (Q8L1A8) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-)|
          Length = 293

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 165 QAAGAGEGLRMEALPSSPRHPPKYDSAAVQNALEQLASIDLIELSKEARIEHCRATRDLS 344
           +AAGA   + +E +PS  R        A    LE++  +  I +  +ARI H    R L 
Sbjct: 34  EAAGASAVMALERVPSDIRAAGGVARMADPTVLEEVMKVVSIPVMAKARIGHIVEARVLE 93

Query: 345 SCG 353
           + G
Sbjct: 94  ALG 96

to top

>RFFL_MOUSE (Q6ZQM0) Rififylin (RING finger and FYVE-like domain-containing|
           protein 1) (Fring)
          Length = 377

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 369 VLNSCGHASLCAECSQRCDVCP 434
           VL  CGH   C +C +R + CP
Sbjct: 341 VLLECGHMVTCTKCGKRMNECP 362

to top

>HRPI_PSESY (P35655) Hypersensitivity response secretion protein hrpI|
          Length = 695

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 240 SAAVQNALEQLASIDLIELSKEARIEHCRATRDLSSCGRYVQHVLNSCGHASLC-AECSQ 416
           SA +Q    +   +  I +  E  IEHC+  RD +    YV+  L S  +   C AE  Q
Sbjct: 527 SAVLQRLASECVPLRAIRVIAETLIEHCQHERDTNVLTDYVRIALKSQIYHQYCGAEGLQ 586

Query: 417 RCDVCPFAE 443
              V P +E
Sbjct: 587 VWLVTPESE 595

to top

>YHJU_ECOLI (P37659) Hypothetical protein yhjU|
          Length = 559

 Score = 25.4 bits (54), Expect(2) = 8.4
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +2

Query: 128 PHAPPVATVDAVASRGCWRGLADGGAPFVAEAPSQ 232
           P   P  TV            A GGAP V + P+Q
Sbjct: 163 PAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQ 197



 Score = 21.6 bits (44), Expect(2) = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 220 GTLPSTTAPPSRMLWSSW 273
           G +P+ TAPP+    ++W
Sbjct: 192 GDMPAQTAPPTTANLNAW 209

to top

>NEB2_HUMAN (Q96SB3) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein|
           phosphatase 1 regulatory subunit 9B)
          Length = 815

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 110 SPIPREPHAPPVATVDAVASRGCWRGLADGGAPFVAEAPSQVRQRRRPE 256
           SP P EP A      +A A     RG+ +G AP V  AP +V + ++ +
Sbjct: 338 SPAPEEPKAQAAPEKEAAAVAPPERGVGNGRAPDV--APEEVDESKKED 384

to top

>IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)|
          Length = 236

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 381 CGHASLCAECSQRCDVC 431
           C H  +CAECS RC  C
Sbjct: 204 CRHLVVCAECSPRCKRC 220

to top

>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 339  LSSCGRYVQHVLNSCGHASLCAECSQRC 422
            L++CG     +    GH+ + A+CSQRC
Sbjct: 2126 LANCGCTSNGIYYQLGHSFVTADCSQRC 2153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,080,193
Number of Sequences: 219361
Number of extensions: 1189112
Number of successful extensions: 4793
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4790
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result